RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 A4GALTQ9NPC4 353 aa12.53□□□□□ -0.4
SYNGAP1-204ENST00000449372 C1GALT1Q9NS00 363 aa12.53□□□□□ -0.4
SYNGAP1-204ENST00000449372 DHCR7Q9UBM7 475 aaKnown RBP12.53□□□□□ -0.4
SYNGAP1-204ENST00000449372 TMEM129A0AVI4 362 aa12.53□□□□□ -0.4
SYNGAP1-204ENST00000449372 IGF2P01344 180 aa12.53□□□□□ -0.4
SYNGAP1-204ENST00000449372 IGFBP1P08833 259 aaPredicted RBP12.53□□□□□ -0.4
SYNGAP1-204ENST00000449372 TIMP2P16035 220 aa12.53□□□□□ -0.4
SYNGAP1-204ENST00000449372 ACTR1AP61163 376 aa12.53□□□□□ -0.4
SYNGAP1-204ENST00000449372 HBA1P69905 142 aa12.53□□□□□ -0.4
SYNGAP1-204ENST00000449372 GAB1Q13480 694 aa12.53□□□□□ -0.4
SYNGAP1-204ENST00000449372 LRRC73Q5JTD7 316 aa12.53□□□□□ -0.4
SYNGAP1-204ENST00000449372 MANEAQ5SRI9 462 aa12.53□□□□□ -0.4
SYNGAP1-204ENST00000449372 CD200R1LQ6Q8B3 271 aa12.53□□□□□ -0.4
SYNGAP1-204ENST00000449372 HSD11B1LQ7Z5J1 315 aa12.53□□□□□ -0.4
SYNGAP1-204ENST00000449372 OAFQ86UD1 273 aa12.53□□□□□ -0.4
SYNGAP1-204ENST00000449372 TMEM185AQ8NFB2 350 aa12.53□□□□□ -0.4
SYNGAP1-204ENST00000449372 C16orf78Q8WTQ4 265 aa12.53□□□□□ -0.4
SYNGAP1-204ENST00000449372 SORCS1Q8WY21 1168 aa12.53□□□□□ -0.4
SYNGAP1-204ENST00000449372 PKP4Q99569 1192 aa12.53□□□□□ -0.4
SYNGAP1-204ENST00000449372 GSDMCQ9BYG8 508 aa12.53□□□□□ -0.4
SYNGAP1-204ENST00000449372 WDR26Q9H7D7 661 aa12.53□□□□□ -0.4
SYNGAP1-204ENST00000449372 CBY1Q9Y3M2 126 aa12.53□□□□□ -0.4
SYNGAP1-204ENST00000449372 SIM1P81133 766 aaPredicted RBP12.53□□□□□ -0.4
SYNGAP1-204ENST00000449372 PDZK1IP1Q13113 114 aa12.53□□□□□ -0.4
SYNGAP1-204ENST00000449372 COMMD6Q7Z4G1 85 aa12.53□□□□□ -0.4
SYNGAP1-204ENST00000449372 HDDC3Q8N4P3 179 aa12.53□□□□□ -0.4
SYNGAP1-204ENST00000449372 FBXO15Q8NCQ5 510 aaPredicted RBP12.53□□□□□ -0.4
SYNGAP1-204ENST00000449372 OR4K1Q8NGD4 311 aa12.53□□□□□ -0.4
SYNGAP1-204ENST00000449372 PIGKQ92643 395 aa12.53□□□□□ -0.4
SYNGAP1-204ENST00000449372 WDR89Q96FK6 387 aaPredicted RBP12.53□□□□□ -0.4
SYNGAP1-204ENST00000449372 TMEM41AQ96HV5 264 aa12.53□□□□□ -0.4
SYNGAP1-204ENST00000449372 ZNF514Q96K75 400 aaPredicted RBP12.53□□□□□ -0.4
SYNGAP1-204ENST00000449372 RHCGQ9UBD6 479 aa12.53□□□□□ -0.4
SYNGAP1-204ENST00000449372 RANBP2P49792 3224 aaKnown RBP12.52□□□□□ -0.4
SYNGAP1-204ENST00000449372 FXYD6-FXYD2A0A087WZ82 144 aa12.52□□□□□ -0.4
SYNGAP1-204ENST00000449372 C5orf52A6NGY3 159 aa12.52□□□□□ -0.4
SYNGAP1-204ENST00000449372 HEPACAM2A8MVW5 462 aa12.52□□□□□ -0.4
SYNGAP1-204ENST00000449372 UBE2CO00762 179 aa12.52□□□□□ -0.4
SYNGAP1-204ENST00000449372 CDC123O75794 336 aaPredicted RBP12.52□□□□□ -0.4
SYNGAP1-204ENST00000449372 POU3F4P49335 361 aa12.52□□□□□ -0.4
SYNGAP1-204ENST00000449372 HENMT1Q5T8I9 393 aaKnown RBP12.52□□□□□ -0.4
SYNGAP1-204ENST00000449372 KLHL36Q8N4N3 616 aa12.52□□□□□ -0.4
SYNGAP1-204ENST00000449372 MEIOBQ8N635 442 aa12.52□□□□□ -0.4
SYNGAP1-204ENST00000449372 FXYD6Q9H0Q3 95 aa12.52□□□□□ -0.4
SYNGAP1-204ENST00000449372 NPDC1Q9NQX5 325 aaPredicted RBP12.52□□□□□ -0.4
SYNGAP1-204ENST00000449372 AKAP7Q9P0M2 348 aaPredicted RBP12.52□□□□□ -0.4
SYNGAP1-204ENST00000449372 NDOR1Q9UHB4 597 aa12.52□□□□□ -0.4
SYNGAP1-204ENST00000449372 PRODHO43272 600 aa12.52□□□□□ -0.41
SYNGAP1-204ENST00000449372 SPINT1O43278 529 aa12.52□□□□□ -0.41
SYNGAP1-204ENST00000449372 TLX2O43763 284 aaPredicted RBP12.52□□□□□ -0.41
SYNGAP1-204ENST00000449372 RAD1O60671 282 aa12.52□□□□□ -0.41
SYNGAP1-204ENST00000449372 LEFTY1O75610 366 aa12.52□□□□□ -0.41
SYNGAP1-204ENST00000449372 HEXBP07686 556 aa12.52□□□□□ -0.41
SYNGAP1-204ENST00000449372 FURINP09958 794 aa12.52□□□□□ -0.41
SYNGAP1-204ENST00000449372 NR2F1P10589 423 aa12.52□□□□□ -0.41
SYNGAP1-204ENST00000449372 MESP2Q0VG99 397 aa12.52□□□□□ -0.41
SYNGAP1-204ENST00000449372 SLC25A30Q5SVS4 291 aa12.52□□□□□ -0.41
SYNGAP1-204ENST00000449372 C12orf73Q69YU5 71 aa12.52□□□□□ -0.41
SYNGAP1-204ENST00000449372 TECPR1Q7Z6L1 1165 aa12.52□□□□□ -0.41
SYNGAP1-204ENST00000449372 NAA40Q86UY6 237 aa12.52□□□□□ -0.41
SYNGAP1-204ENST00000449372 VRK3Q8IV63 474 aa12.52□□□□□ -0.41
SYNGAP1-204ENST00000449372 CYB5D2Q8WUJ1 264 aa12.52□□□□□ -0.41
SYNGAP1-204ENST00000449372 WNT2BQ93097 391 aa12.52□□□□□ -0.41
SYNGAP1-204ENST00000449372 BBS4Q96RK4 519 aa12.52□□□□□ -0.41
SYNGAP1-204ENST00000449372 FAIM2Q9BWQ8 316 aa12.52□□□□□ -0.41
SYNGAP1-204ENST00000449372 CALML5Q9NZT1 146 aa12.52□□□□□ -0.41
SYNGAP1-204ENST00000449372 DMRT1Q9Y5R6 373 aa12.52□□□□□ -0.41
SYNGAP1-204ENST00000449372 GSAPA4D1B5 854 aa12.52□□□□□ -0.41
SYNGAP1-204ENST00000449372 CD8B2A6NJW9 211 aa12.52□□□□□ -0.41
SYNGAP1-204ENST00000449372 FAM227AF5H4B4 570 aa12.52□□□□□ -0.41
SYNGAP1-204ENST00000449372 GABRPO00591 440 aa12.52□□□□□ -0.41
SYNGAP1-204ENST00000449372 STX11O75558 287 aa12.52□□□□□ -0.41
SYNGAP1-204ENST00000449372 ANKRD34CP0C6C1 535 aa12.52□□□□□ -0.41
SYNGAP1-204ENST00000449372 CD8BP10966 210 aa12.52□□□□□ -0.41
SYNGAP1-204ENST00000449372 MYOGP15173 224 aa12.52□□□□□ -0.41
SYNGAP1-204ENST00000449372 EIF2S3P41091 472 aaKnown RBP12.52□□□□□ -0.41
SYNGAP1-204ENST00000449372 NUBP1P53384 320 aa12.52□□□□□ -0.41
SYNGAP1-204ENST00000449372 TAS2R50P59544 299 aa12.52□□□□□ -0.41
SYNGAP1-204ENST00000449372 PON3Q15166 354 aa12.52□□□□□ -0.41
SYNGAP1-204ENST00000449372 DHCR24Q15392 516 aa12.52□□□□□ -0.41
SYNGAP1-204ENST00000449372 ZNF658BQ4V348 819 aaPredicted RBP12.52□□□□□ -0.41
SYNGAP1-204ENST00000449372 ETFBKMTQ8IXQ9 262 aa12.52□□□□□ -0.41
SYNGAP1-204ENST00000449372 BBS10Q8TAM1 723 aa12.52□□□□□ -0.41
SYNGAP1-204ENST00000449372 ZNF354BQ96LW1 612 aa12.52□□□□□ -0.41
SYNGAP1-204ENST00000449372 ZFP3Q96NJ6 502 aa12.52□□□□□ -0.41
SYNGAP1-204ENST00000449372 PCBD2Q9H0N5 130 aa12.52□□□□□ -0.41
SYNGAP1-204ENST00000449372 KCND3Q9UK17 655 aa12.52□□□□□ -0.41
SYNGAP1-204ENST00000449372 TCF20Q9UGU0 1960 aaKnown RBP12.52□□□□□ -0.41
SYNGAP1-204ENST00000449372 OR6C74A6NCV1 312 aa12.51□□□□□ -0.41
SYNGAP1-204ENST00000449372 TERTO14746 1132 aaKnown RBP12.51□□□□□ -0.41
SYNGAP1-204ENST00000449372 VEGFDO43915 354 aa12.51□□□□□ -0.41
SYNGAP1-204ENST00000449372 ZNF155Q12901 538 aaPredicted RBP12.51□□□□□ -0.41
SYNGAP1-204ENST00000449372 TRAM1Q15629 374 aa12.51□□□□□ -0.41
SYNGAP1-204ENST00000449372 SSX2Q16385 188 aa12.51□□□□□ -0.41
SYNGAP1-204ENST00000449372 TMEM255AQ5JRV8 349 aa12.51□□□□□ -0.41
SYNGAP1-204ENST00000449372 SFRP4Q6FHJ7 346 aaPredicted RBP12.51□□□□□ -0.41
SYNGAP1-204ENST00000449372 ZCCHC12Q6PEW1 402 aa12.51□□□□□ -0.41
SYNGAP1-204ENST00000449372 RNFT2Q96EX2 444 aa12.51□□□□□ -0.41
SYNGAP1-204ENST00000449372 SLC27A6Q9Y2P4 619 aa12.51□□□□□ -0.41
SYNGAP1-204ENST00000449372 E9PI62 339 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms