RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 POMZP3Q6PJE2 187 aa13.31□□□□□ -0.28
TNF-208ENST00000449264 TMEM179BQ7Z7N9 219 aa13.31□□□□□ -0.28
TNF-208ENST00000449264 SULF2Q8IWU5 870 aa13.31□□□□□ -0.28
TNF-208ENST00000449264 HS3ST5Q8IZT8 346 aa13.31□□□□□ -0.28
TNF-208ENST00000449264 ZADH2Q8N4Q0 377 aa13.31□□□□□ -0.28
TNF-208ENST00000449264 LSMEM1Q8N8F7 131 aa13.31□□□□□ -0.28
TNF-208ENST00000449264 FADS6Q8N9I5 356 aa13.31□□□□□ -0.28
TNF-208ENST00000449264 PIK3C3Q8NEB9 887 aa13.31□□□□□ -0.28
TNF-208ENST00000449264 OR2M7Q8NG81 312 aa13.31□□□□□ -0.28
TNF-208ENST00000449264 NR4A3Q92570 626 aa13.31□□□□□ -0.28
TNF-208ENST00000449264 EME1Q96AY2 570 aa13.31□□□□□ -0.28
TNF-208ENST00000449264 CIB1Q99828 191 aa13.31□□□□□ -0.28
TNF-208ENST00000449264 FAM173AQ9BQD7 235 aa13.31□□□□□ -0.28
TNF-208ENST00000449264 POLR2J2Q9GZM3 115 aaKnown RBP13.31□□□□□ -0.28
TNF-208ENST00000449264 POLR2J3Q9H1A7 115 aaKnown RBP13.31□□□□□ -0.28
TNF-208ENST00000449264 PTGES2Q9H7Z7 377 aa13.31□□□□□ -0.28
TNF-208ENST00000449264 HHATLQ9HCP6 504 aa13.31□□□□□ -0.28
TNF-208ENST00000449264 MAN2C1Q9NTJ4 1040 aa13.31□□□□□ -0.28
TNF-208ENST00000449264 ACER3Q9NUN7 267 aa13.31□□□□□ -0.28
TNF-208ENST00000449264 BOKQ9UMX3 212 aaPredicted RBP13.31□□□□□ -0.28
TNF-208ENST00000449264 LRRC3CA6NJW4 275 aa13.3□□□□□ -0.28
TNF-208ENST00000449264 FAM47E-STBD1D6RA91 191 aa13.3□□□□□ -0.28
TNF-208ENST00000449264 PEX1O43933 1283 aa13.3□□□□□ -0.28
TNF-208ENST00000449264 PDGFAP04085 211 aa13.3□□□□□ -0.28
TNF-208ENST00000449264 GP1BBP13224 206 aa13.3□□□□□ -0.28
TNF-208ENST00000449264 ELAVL4P26378 380 aaKnown RBP13.3□□□□□ -0.28
TNF-208ENST00000449264 DNAJA1P31689 397 aaKnown RBP13.3□□□□□ -0.28
TNF-208ENST00000449264 MEOX1P50221 254 aa13.3□□□□□ -0.28
TNF-208ENST00000449264 TRAM2Q15035 370 aa13.3□□□□□ -0.28
TNF-208ENST00000449264 TOMM20Q15388 145 aa13.3□□□□□ -0.28
TNF-208ENST00000449264 EPHX4Q8IUS5 362 aa13.3□□□□□ -0.28
TNF-208ENST00000449264 NKAIN4Q8IVV8 208 aa13.3□□□□□ -0.28
TNF-208ENST00000449264 TMEM178AQ8NBL3 297 aa13.3□□□□□ -0.28
TNF-208ENST00000449264 SLC39A7Q92504 469 aa13.3□□□□□ -0.28
TNF-208ENST00000449264 C3orf49Q96BT1 292 aa13.3□□□□□ -0.28
TNF-208ENST00000449264 SDCCAG3Q96C92 435 aa13.3□□□□□ -0.28
TNF-208ENST00000449264 DHRS1Q96LJ7 313 aa13.3□□□□□ -0.28
TNF-208ENST00000449264 ALPK1Q96QP1 1244 aa13.3□□□□□ -0.28
TNF-208ENST00000449264 EPYCQ99645 322 aa13.3□□□□□ -0.28
TNF-208ENST00000449264 MED17Q9NVC6 651 aa13.3□□□□□ -0.28
TNF-208ENST00000449264 STOML1Q9UBI4 398 aa13.3□□□□□ -0.28
TNF-208ENST00000449264 DKKL1Q9UK85 242 aa13.3□□□□□ -0.28
TNF-208ENST00000449264 MAGED1Q9Y5V3 778 aaPredicted RBP13.3□□□□□ -0.28
TNF-208ENST00000449264 PKD1L2Q7Z442 2459 aa13.29□□□□□ -0.28
TNF-208ENST00000449264 MED12Q93074 2177 aa13.29□□□□□ -0.28
TNF-208ENST00000449264 A0A1W2PRQ8 180 aa13.29□□□□□ -0.28
TNF-208ENST00000449264 SHISA8B8ZZ34 492 aa13.29□□□□□ -0.28
TNF-208ENST00000449264 K7EM74 188 aa13.29□□□□□ -0.28
TNF-208ENST00000449264 PDLIM1O00151 329 aa13.29□□□□□ -0.28
TNF-208ENST00000449264 FAAHO00519 579 aa13.29□□□□□ -0.28
TNF-208ENST00000449264 CHP2O43745 196 aa13.29□□□□□ -0.28
TNF-208ENST00000449264 DPM1O60762 260 aa13.29□□□□□ -0.28
TNF-208ENST00000449264 FPR1P21462 350 aa13.29□□□□□ -0.28
TNF-208ENST00000449264 SLC1A3P43003 542 aa13.29□□□□□ -0.28
TNF-208ENST00000449264 ARHGDIAP52565 204 aa13.29□□□□□ -0.28
TNF-208ENST00000449264 SMIM11AP58511 58 aa13.29□□□□□ -0.28
TNF-208ENST00000449264 FOXF1Q12946 379 aa13.29□□□□□ -0.28
TNF-208ENST00000449264 DGCR6Q14129 220 aa13.29□□□□□ -0.28
TNF-208ENST00000449264 DCST1Q5T197 706 aa13.29□□□□□ -0.28
TNF-208ENST00000449264 OTUD3Q5T2D3 398 aaPredicted RBP13.29□□□□□ -0.28
TNF-208ENST00000449264 ULK3Q6PHR2 472 aa13.29□□□□□ -0.28
TNF-208ENST00000449264 WDR88Q6ZMY6 472 aa13.29□□□□□ -0.28
TNF-208ENST00000449264 KDF1Q8NAX2 398 aaPredicted RBP13.29□□□□□ -0.28
TNF-208ENST00000449264 OR4C15Q8NGM1 316 aa13.29□□□□□ -0.28
TNF-208ENST00000449264 SLC7A13Q8TCU3 470 aa13.29□□□□□ -0.28
TNF-208ENST00000449264 TMEM255BQ8WV15 326 aa13.29□□□□□ -0.28
TNF-208ENST00000449264 SNRNP27Q8WVK2 155 aaKnown RBP13.29□□□□□ -0.28
TNF-208ENST00000449264 DNAJA4Q8WW22 397 aaPredicted RBP13.29□□□□□ -0.28
TNF-208ENST00000449264 NRG4Q8WWG1 115 aa13.29□□□□□ -0.28
TNF-208ENST00000449264 NTNG2Q96CW9 530 aa13.29□□□□□ -0.28
TNF-208ENST00000449264 C1GALT1C1Q96EU7 318 aa13.29□□□□□ -0.28
TNF-208ENST00000449264 SCMH1Q96GD3 660 aa13.29□□□□□ -0.28
TNF-208ENST00000449264 ABHD17AQ96GS6 310 aa13.29□□□□□ -0.28
TNF-208ENST00000449264 BARD1Q99728 777 aaKnown RBP13.29□□□□□ -0.28
TNF-208ENST00000449264 ZFP64Q9NPA5 681 aa13.29□□□□□ -0.28
TNF-208ENST00000449264 TMCC3Q9ULS5 477 aa13.29□□□□□ -0.28
TNF-208ENST00000449264 TRAV17A0A0B4J275 112 aa13.28□□□□□ -0.28
TNF-208ENST00000449264 G3V2T6 193 aa13.28□□□□□ -0.28
TNF-208ENST00000449264 KLRC4-KLRK1H3BQV0 150 aa13.28□□□□□ -0.28
TNF-208ENST00000449264 ITGB2P05107 769 aa13.28□□□□□ -0.28
TNF-208ENST00000449264 PRKCAP17252 672 aa13.28□□□□□ -0.28
TNF-208ENST00000449264 DPP4P27487 766 aa13.28□□□□□ -0.28
TNF-208ENST00000449264 TACR3P29371 465 aa13.28□□□□□ -0.28
TNF-208ENST00000449264 PTDSS1P48651 473 aaKnown RBP13.28□□□□□ -0.28
TNF-208ENST00000449264 PLGLB1Q02325 96 aa13.28□□□□□ -0.28
TNF-208ENST00000449264 MERTKQ12866 999 aa13.28□□□□□ -0.28
TNF-208ENST00000449264 SEC23BQ15437 767 aa13.28□□□□□ -0.28
TNF-208ENST00000449264 PLPPR5Q32ZL2 321 aa13.28□□□□□ -0.28
TNF-208ENST00000449264 PODNL1Q6PEZ8 512 aa13.28□□□□□ -0.28
TNF-208ENST00000449264 SHQ1Q6PI26 577 aaKnown RBP13.28□□□□□ -0.28
TNF-208ENST00000449264 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.28□□□□□ -0.28
TNF-208ENST00000449264 STK32CQ86UX6 486 aa13.28□□□□□ -0.28
TNF-208ENST00000449264 ZDHHC13Q8IUH4 622 aa13.28□□□□□ -0.28
TNF-208ENST00000449264 OR5K1Q8NHB7 308 aa13.28□□□□□ -0.28
TNF-208ENST00000449264 TMEM234Q8WY98 164 aa13.28□□□□□ -0.28
TNF-208ENST00000449264 ST8SIA1Q92185 356 aa13.28□□□□□ -0.28
TNF-208ENST00000449264 SLC38A4Q969I6 547 aa13.28□□□□□ -0.28
TNF-208ENST00000449264 NPAS1Q99742 590 aa13.28□□□□□ -0.28
TNF-208ENST00000449264 ARHGAP9Q9BRR9 750 aa13.28□□□□□ -0.28
TNF-208ENST00000449264 PDP1Q9P0J1 537 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms