RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 BDH2Q9BUT1 245 aa12.77□□□□□ -0.37
SHMT2-203ENST00000449049 FNDC11Q9BVV2 318 aa12.77□□□□□ -0.37
SHMT2-203ENST00000449049 ANKRD19PQ9H560 264 aa12.77□□□□□ -0.37
SHMT2-203ENST00000449049 REEP1Q9H902 201 aa12.77□□□□□ -0.37
SHMT2-203ENST00000449049 MAN2C1Q9NTJ4 1040 aa12.77□□□□□ -0.37
SHMT2-203ENST00000449049 ACER3Q9NUN7 267 aa12.77□□□□□ -0.37
SHMT2-203ENST00000449049 TUBD1Q9UJT1 453 aa12.77□□□□□ -0.37
SHMT2-203ENST00000449049 LYVE1Q9Y5Y7 322 aa12.77□□□□□ -0.37
SHMT2-203ENST00000449049 NCOR2Q9Y618 2525 aa12.76□□□□□ -0.37
SHMT2-203ENST00000449049 A0A1W2PRQ8 180 aa12.76□□□□□ -0.37
SHMT2-203ENST00000449049 CHP2O43745 196 aa12.76□□□□□ -0.37
SHMT2-203ENST00000449049 CDC40O60508 579 aaKnown RBP eCLIP12.76□□□□□ -0.37
SHMT2-203ENST00000449049 H1F0P07305 194 aaKnown RBP12.76□□□□□ -0.37
SHMT2-203ENST00000449049 SLC1A3P43003 542 aa12.76□□□□□ -0.37
SHMT2-203ENST00000449049 LIMS1P48059 325 aa12.76□□□□□ -0.37
SHMT2-203ENST00000449049 HMGA2P52926 109 aa12.76□□□□□ -0.37
SHMT2-203ENST00000449049 CDH12P55289 794 aa12.76□□□□□ -0.37
SHMT2-203ENST00000449049 DGCR6Q14129 220 aa12.76□□□□□ -0.37
SHMT2-203ENST00000449049 GK3PQ14409 553 aa12.76□□□□□ -0.37
SHMT2-203ENST00000449049 HYAL4Q2M3T9 481 aa12.76□□□□□ -0.37
SHMT2-203ENST00000449049 PLPPR5Q32ZL2 321 aa12.76□□□□□ -0.37
SHMT2-203ENST00000449049 COLEC12Q5KU26 742 aa12.76□□□□□ -0.37
SHMT2-203ENST00000449049 ULK3Q6PHR2 472 aa12.76□□□□□ -0.37
SHMT2-203ENST00000449049 ZFP62Q8NB50 900 aaPredicted RBP12.76□□□□□ -0.37
SHMT2-203ENST00000449049 OR4C15Q8NGM1 316 aa12.76□□□□□ -0.37
SHMT2-203ENST00000449049 DNAJA4Q8WW22 397 aaPredicted RBP12.76□□□□□ -0.37
SHMT2-203ENST00000449049 TMEM234Q8WY98 164 aa12.76□□□□□ -0.37
SHMT2-203ENST00000449049 C3orf49Q96BT1 292 aa12.76□□□□□ -0.37
SHMT2-203ENST00000449049 EPYCQ99645 322 aa12.76□□□□□ -0.37
SHMT2-203ENST00000449049 FUZQ9BT04 418 aa12.76□□□□□ -0.37
SHMT2-203ENST00000449049 ADAM19Q9H013 955 aa12.76□□□□□ -0.37
SHMT2-203ENST00000449049 ADNPQ9H2P0 1102 aa12.76□□□□□ -0.37
SHMT2-203ENST00000449049 UBQLN3Q9H347 655 aa12.76□□□□□ -0.37
SHMT2-203ENST00000449049 C12orf10Q9HB07 376 aa12.76□□□□□ -0.37
SHMT2-203ENST00000449049 MED17Q9NVC6 651 aa12.76□□□□□ -0.37
SHMT2-203ENST00000449049 RPS6KB2Q9UBS0 482 aa12.76□□□□□ -0.37
SHMT2-203ENST00000449049 TP53TG5Q9Y2B4 290 aa12.76□□□□□ -0.37
SHMT2-203ENST00000449049 CEP295Q9C0D2 2601 aa12.76□□□□□ -0.37
SHMT2-203ENST00000449049 CFAP47Q6ZTR5 3102 aa12.76□□□□□ -0.37
SHMT2-203ENST00000449049 A0A087WZY1 265 aa12.76□□□□□ -0.37
SHMT2-203ENST00000449049 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.76□□□□□ -0.37
SHMT2-203ENST00000449049 A6NHS1 94 aa12.76□□□□□ -0.37
SHMT2-203ENST00000449049 GNGT2O14610 69 aa12.76□□□□□ -0.37
SHMT2-203ENST00000449049 GLSO94925 669 aaPredicted RBP12.76□□□□□ -0.37
SHMT2-203ENST00000449049 GADD45GO95257 159 aa12.76□□□□□ -0.37
SHMT2-203ENST00000449049 NTN1O95631 604 aa12.76□□□□□ -0.37
SHMT2-203ENST00000449049 GP1BBP13224 206 aa12.76□□□□□ -0.37
SHMT2-203ENST00000449049 PRKCAP17252 672 aa12.76□□□□□ -0.37
SHMT2-203ENST00000449049 ZNF41P51814 821 aaPredicted RBP12.76□□□□□ -0.37
SHMT2-203ENST00000449049 DSCR4P56555 118 aaPredicted RBP12.76□□□□□ -0.37
SHMT2-203ENST00000449049 SESN3P58005 492 aa12.76□□□□□ -0.37
SHMT2-203ENST00000449049 SMIM11AP58511 58 aa12.76□□□□□ -0.37
SHMT2-203ENST00000449049 ZNF169Q14929 603 aaPredicted RBP12.76□□□□□ -0.37
SHMT2-203ENST00000449049 TRAM2Q15035 370 aa12.76□□□□□ -0.37
SHMT2-203ENST00000449049 SLC25A53Q5H9E4 307 aa12.76□□□□□ -0.37
SHMT2-203ENST00000449049 ALG10BQ5I7T1 473 aa12.76□□□□□ -0.37
SHMT2-203ENST00000449049 RBMXL3Q8N7X1 1067 aaKnown RBP12.76□□□□□ -0.37
SHMT2-203ENST00000449049 PRSS27Q9BQR3 290 aa12.76□□□□□ -0.37
SHMT2-203ENST00000449049 TTTY12Q9BZ98 90 aa12.76□□□□□ -0.37
SHMT2-203ENST00000449049 SEMA6AQ9H2E6 1030 aa12.76□□□□□ -0.37
SHMT2-203ENST00000449049 SLC7A7Q9UM01 511 aa12.76□□□□□ -0.37
SHMT2-203ENST00000449049 SAMHD1Q9Y3Z3 626 aaKnown RBP12.76□□□□□ -0.37
SHMT2-203ENST00000449049 DMXL2Q8TDJ6 3036 aa12.75□□□□□ -0.37
SHMT2-203ENST00000449049 RFPL3SP0C7P2 107 aa12.75□□□□□ -0.37
SHMT2-203ENST00000449049 SRD5A2P31213 254 aa12.75□□□□□ -0.37
SHMT2-203ENST00000449049 SLC34A1Q06495 639 aa12.75□□□□□ -0.37
SHMT2-203ENST00000449049 ACACAQ13085 2346 aa12.75□□□□□ -0.37
SHMT2-203ENST00000449049 LINC00114Q6XXX2 140 aa12.75□□□□□ -0.37
SHMT2-203ENST00000449049 GRINAQ7Z429 371 aa12.75□□□□□ -0.37
SHMT2-203ENST00000449049 ATG4DQ86TL0 474 aaPredicted RBP12.75□□□□□ -0.37
SHMT2-203ENST00000449049 HEATR5AQ86XA9 2040 aa12.75□□□□□ -0.37
SHMT2-203ENST00000449049 SLC38A4Q969I6 547 aa12.75□□□□□ -0.37
SHMT2-203ENST00000449049 ZBTB8AQ96BR9 441 aa12.75□□□□□ -0.37
SHMT2-203ENST00000449049 DTNBP1Q96EV8 351 aa12.75□□□□□ -0.37
SHMT2-203ENST00000449049 ZNF703Q9H7S9 590 aaPredicted RBP12.75□□□□□ -0.37
SHMT2-203ENST00000449049 VDAC3Q9Y277 283 aa12.75□□□□□ -0.37
SHMT2-203ENST00000449049 MRPS18CQ9Y3D5 142 aaKnown RBP12.75□□□□□ -0.37
SHMT2-203ENST00000449049 C7orf72A4D263 438 aa12.74□□□□□ -0.37
SHMT2-203ENST00000449049 FAM47E-STBD1D6RA91 191 aa12.74□□□□□ -0.37
SHMT2-203ENST00000449049 TNFRSF11BO00300 401 aa12.74□□□□□ -0.37
SHMT2-203ENST00000449049 DPP4P27487 766 aa12.74□□□□□ -0.37
SHMT2-203ENST00000449049 TACR3P29371 465 aa12.74□□□□□ -0.37
SHMT2-203ENST00000449049 DNAJA1P31689 397 aaKnown RBP12.74□□□□□ -0.37
SHMT2-203ENST00000449049 HTR3AP46098 478 aa12.74□□□□□ -0.37
SHMT2-203ENST00000449049 IST1P53990 364 aa12.74□□□□□ -0.37
SHMT2-203ENST00000449049 WDR88Q6ZMY6 472 aa12.74□□□□□ -0.37
SHMT2-203ENST00000449049 ASB18Q6ZVZ8 466 aa12.74□□□□□ -0.37
SHMT2-203ENST00000449049 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.74□□□□□ -0.37
SHMT2-203ENST00000449049 OR52J3Q8NH60 311 aa12.74□□□□□ -0.37
SHMT2-203ENST00000449049 C9orf43Q8TAL5 461 aaPredicted RBP12.74□□□□□ -0.37
SHMT2-203ENST00000449049 MPP4Q96JB8 637 aa12.74□□□□□ -0.37
SHMT2-203ENST00000449049 MRGPRX4Q96LA9 322 aa12.74□□□□□ -0.37
SHMT2-203ENST00000449049 ARHGAP9Q9BRR9 750 aa12.74□□□□□ -0.37
SHMT2-203ENST00000449049 ZNF426Q9BUY5 554 aa12.74□□□□□ -0.37
SHMT2-203ENST00000449049 SELENONQ9NZV5 590 aa12.74□□□□□ -0.37
SHMT2-203ENST00000449049 B4GALT7Q9UBV7 327 aa12.74□□□□□ -0.37
SHMT2-203ENST00000449049 U3KQV3 271 aa12.74□□□□□ -0.37
SHMT2-203ENST00000449049 TRBV4-1A0A0J9YWV2 114 aa12.74□□□□□ -0.37
SHMT2-203ENST00000449049 WISP1O95388 367 aa12.74□□□□□ -0.37
SHMT2-203ENST00000449049 FAM87AP0C7U9 286 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms