RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 ADCYAP1P18509 176 aa17.84■□□□□ 0.45
HMGA1-205ENST00000447654 SLC6A11P48066 632 aa17.84■□□□□ 0.45
HMGA1-205ENST00000447654 ART1P52961 327 aa17.84■□□□□ 0.45
HMGA1-205ENST00000447654 PPIAP62937 165 aaKnown RBP17.84■□□□□ 0.45
HMGA1-205ENST00000447654 HBA1P69905 142 aa17.84■□□□□ 0.45
HMGA1-205ENST00000447654 DDX39BQ13838 428 aaKnown RBP17.84■□□□□ 0.45
HMGA1-205ENST00000447654 PON3Q15166 354 aa17.84■□□□□ 0.45
HMGA1-205ENST00000447654 UAP1L1Q3KQV9 507 aa17.84■□□□□ 0.45
HMGA1-205ENST00000447654 HENMT1Q5T8I9 393 aaKnown RBP17.84■□□□□ 0.45
HMGA1-205ENST00000447654 LYPLAL1Q5VWZ2 237 aa17.84■□□□□ 0.45
HMGA1-205ENST00000447654 H3F3CQ6NXT2 135 aa17.84■□□□□ 0.45
HMGA1-205ENST00000447654 FAM111BQ6SJ93 734 aa17.84■□□□□ 0.45
HMGA1-205ENST00000447654 NHLRC1Q6VVB1 395 aa17.84■□□□□ 0.45
HMGA1-205ENST00000447654 ZNF852Q6ZMS4 543 aa17.84■□□□□ 0.45
HMGA1-205ENST00000447654 CHST9Q7L1S5 443 aa17.84■□□□□ 0.45
HMGA1-205ENST00000447654 PXKQ7Z7A4 578 aa17.84■□□□□ 0.45
HMGA1-205ENST00000447654 ZFP82Q8N141 532 aa17.84■□□□□ 0.45
HMGA1-205ENST00000447654 ARL14EPQ8N8R7 260 aaPredicted RBP17.84■□□□□ 0.45
HMGA1-205ENST00000447654 EXOSC8Q96B26 276 aaKnown RBP17.84■□□□□ 0.45
HMGA1-205ENST00000447654 ZDHHC5Q9C0B5 715 aa17.84■□□□□ 0.45
HMGA1-205ENST00000447654 QRSL1Q9H0R6 528 aaKnown RBP17.84■□□□□ 0.45
HMGA1-205ENST00000447654 TMPRSS5Q9H3S3 457 aa17.84■□□□□ 0.45
HMGA1-205ENST00000447654 PRRC2BQ5JSZ5 2229 aaKnown RBP17.84■□□□□ 0.45
HMGA1-205ENST00000447654 ZNF106Q9H2Y7 1883 aaKnown RBP17.84■□□□□ 0.45
HMGA1-205ENST00000447654 PLXNA4Q9HCM2 1894 aa17.84■□□□□ 0.45
HMGA1-205ENST00000447654 TRAV1-2A0A0B4J238 106 aa17.84■□□□□ 0.45
HMGA1-205ENST00000447654 OR14I1A6ND48 311 aa17.84■□□□□ 0.45
HMGA1-205ENST00000447654 MGAT4DA6NG13 374 aa17.84■□□□□ 0.45
HMGA1-205ENST00000447654 COLCA2A8K830 154 aa17.84■□□□□ 0.45
HMGA1-205ENST00000447654 MAN2B1O00754 1011 aa17.84■□□□□ 0.45
HMGA1-205ENST00000447654 TBL1XO60907 577 aa17.84■□□□□ 0.45
HMGA1-205ENST00000447654 PMELP40967 661 aa17.84■□□□□ 0.45
HMGA1-205ENST00000447654 RPIAP49247 311 aa17.84■□□□□ 0.45
HMGA1-205ENST00000447654 RIDAP52758 137 aaKnown RBP17.84■□□□□ 0.45
HMGA1-205ENST00000447654 BLOC1S1P78537 153 aa17.84■□□□□ 0.45
HMGA1-205ENST00000447654 SLC3A1Q07837 685 aa17.84■□□□□ 0.45
HMGA1-205ENST00000447654 ATP13A5Q4VNC0 1218 aa17.84■□□□□ 0.45
HMGA1-205ENST00000447654 TPGS2Q68CL5 300 aa17.84■□□□□ 0.45
HMGA1-205ENST00000447654 NAA40Q86UY6 237 aa17.84■□□□□ 0.45
HMGA1-205ENST00000447654 ADGRG2Q8IZP9 1017 aa17.84■□□□□ 0.45
HMGA1-205ENST00000447654 EID2BQ96D98 161 aa17.84■□□□□ 0.45
HMGA1-205ENST00000447654 TMEM169Q96HH4 297 aa17.84■□□□□ 0.45
HMGA1-205ENST00000447654 C19orf43Q9BQ61 176 aa17.84■□□□□ 0.45
HMGA1-205ENST00000447654 IL21Q9HBE4 155 aa17.84■□□□□ 0.45
HMGA1-205ENST00000447654 ARL15Q9NXU5 204 aa17.84■□□□□ 0.45
HMGA1-205ENST00000447654 FCF1Q9Y324 198 aaKnown RBP17.84■□□□□ 0.45
HMGA1-205ENST00000447654 AKR7A3O95154 331 aa17.83■□□□□ 0.45
HMGA1-205ENST00000447654 ATP1B1P05026 303 aa17.83■□□□□ 0.45
HMGA1-205ENST00000447654 EPHX1P07099 455 aa17.83■□□□□ 0.45
HMGA1-205ENST00000447654 MMP11P24347 488 aa17.83■□□□□ 0.45
HMGA1-205ENST00000447654 KLHL26Q53HC5 615 aa17.83■□□□□ 0.45
HMGA1-205ENST00000447654 ATXN7L2Q5T6C5 722 aaPredicted RBP17.83■□□□□ 0.45
HMGA1-205ENST00000447654 AADACL4Q5VUY2 407 aa17.83■□□□□ 0.45
HMGA1-205ENST00000447654 CNKSR3Q6P9H4 555 aa17.83■□□□□ 0.45
HMGA1-205ENST00000447654 DNAAF1Q8NEP3 725 aa17.83■□□□□ 0.45
HMGA1-205ENST00000447654 ASZ1Q8WWH4 475 aa17.83■□□□□ 0.45
HMGA1-205ENST00000447654 TMEM68Q96MH6 324 aa17.83■□□□□ 0.45
HMGA1-205ENST00000447654 TEX12Q9BXU0 123 aa17.83■□□□□ 0.45
HMGA1-205ENST00000447654 TRIM36Q9NQ86 728 aa17.83■□□□□ 0.45
HMGA1-205ENST00000447654 KLHL9Q9P2J3 617 aa17.83■□□□□ 0.45
HMGA1-205ENST00000447654 CLEC4EQ9ULY5 219 aa17.83■□□□□ 0.45
HMGA1-205ENST00000447654 OR51B4Q9Y5P0 310 aa17.83■□□□□ 0.45
HMGA1-205ENST00000447654 KIAA0100Q14667 2235 aaKnown RBP17.83■□□□□ 0.44
HMGA1-205ENST00000447654 ABHD14A-ACY1A0A1B0GW23 586 aa17.83■□□□□ 0.44
HMGA1-205ENST00000447654 ANKRD66B4E2M5 251 aa17.83■□□□□ 0.44
HMGA1-205ENST00000447654 UBXN7O94888 489 aa17.83■□□□□ 0.44
HMGA1-205ENST00000447654 IFNGP01579 166 aa17.83■□□□□ 0.44
HMGA1-205ENST00000447654 HOXC4P09017 264 aaPredicted RBP17.83■□□□□ 0.44
HMGA1-205ENST00000447654 ANXA4P09525 319 aaPredicted RBP17.83■□□□□ 0.44
HMGA1-205ENST00000447654 AOAHP28039 575 aa17.83■□□□□ 0.44
HMGA1-205ENST00000447654 HTR1FP30939 366 aa17.83■□□□□ 0.44
HMGA1-205ENST00000447654 AP1S1P61966 158 aa17.83■□□□□ 0.44
HMGA1-205ENST00000447654 RAB33AQ14088 237 aa17.83■□□□□ 0.44
HMGA1-205ENST00000447654 ZNF791Q3KP31 576 aaPredicted RBP17.83■□□□□ 0.44
HMGA1-205ENST00000447654 RNASE12Q5GAN4 147 aaKnown RBP17.83■□□□□ 0.44
HMGA1-205ENST00000447654 UBE2NLQ5JXB2 153 aa17.83■□□□□ 0.44
HMGA1-205ENST00000447654 ACER2Q5QJU3 275 aa17.83■□□□□ 0.44
HMGA1-205ENST00000447654 KCNRGQ8N5I3 272 aa17.83■□□□□ 0.44
HMGA1-205ENST00000447654 ZNF558Q96NG5 402 aa17.83■□□□□ 0.44
HMGA1-205ENST00000447654 SMG9Q9H0W8 520 aaKnown RBP17.83■□□□□ 0.44
HMGA1-205ENST00000447654 CHRDQ9H2X0 955 aa17.83■□□□□ 0.44
HMGA1-205ENST00000447654 ACSS1Q9NUB1 689 aaPredicted RBP17.83■□□□□ 0.44
HMGA1-205ENST00000447654 LHX3Q9UBR4 397 aa17.83■□□□□ 0.44
HMGA1-205ENST00000447654 INSL5Q9Y5Q6 135 aa17.83■□□□□ 0.44
HMGA1-205ENST00000447654 OBSL1O75147 1896 aa17.82■□□□□ 0.44
HMGA1-205ENST00000447654 OR2F2O95006 317 aa17.82■□□□□ 0.44
HMGA1-205ENST00000447654 H2BFSP57053 126 aa17.82■□□□□ 0.44
HMGA1-205ENST00000447654 OR10A3P58181 314 aa17.82■□□□□ 0.44
HMGA1-205ENST00000447654 TAS2R43P59537 309 aa17.82■□□□□ 0.44
HMGA1-205ENST00000447654 SEMG2Q02383 582 aa17.82■□□□□ 0.44
HMGA1-205ENST00000447654 FZD5Q13467 585 aa17.82■□□□□ 0.44
HMGA1-205ENST00000447654 OR2F1Q13607 317 aa17.82■□□□□ 0.44
HMGA1-205ENST00000447654 SLC43A2Q8N370 569 aa17.82■□□□□ 0.44
HMGA1-205ENST00000447654 OR6K2Q8NGY2 324 aa17.82■□□□□ 0.44
HMGA1-205ENST00000447654 PEX11GQ96HA9 241 aa17.82■□□□□ 0.44
HMGA1-205ENST00000447654 REEP4Q9H6H4 257 aa17.82■□□□□ 0.44
HMGA1-205ENST00000447654 A4GALTQ9NPC4 353 aa17.82■□□□□ 0.44
HMGA1-205ENST00000447654 PCDHB10Q9UN67 800 aa17.82■□□□□ 0.44
HMGA1-205ENST00000447654 C17orf113A0A1B0GUU1 675 aa17.81■□□□□ 0.44
HMGA1-205ENST00000447654 KANTRA0A1W2PQU2 76 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms