RNA–Protein interactions for RNA: ENST00000445623.1

TIMP1-204, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 2

Gene TIMP1, Length 595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-204ENST00000445623 GHDCQ8N2G8 530 aa11.94□□□□□ -0.5
TIMP1-204ENST00000445623 GTPBP8Q8N3Z3 284 aaPredicted RBP11.94□□□□□ -0.5
TIMP1-204ENST00000445623 LSMEM1Q8N8F7 131 aa11.94□□□□□ -0.5
TIMP1-204ENST00000445623 DNAJA4Q8WW22 397 aaPredicted RBP11.94□□□□□ -0.5
TIMP1-204ENST00000445623 SNRNP40Q96DI7 357 aaKnown RBP11.94□□□□□ -0.5
TIMP1-204ENST00000445623 GPR137Q96N19 417 aa11.94□□□□□ -0.5
TIMP1-204ENST00000445623 SEPHS2Q99611 448 aa11.94□□□□□ -0.5
TIMP1-204ENST00000445623 DEFB127Q9H1M4 99 aa11.94□□□□□ -0.5
TIMP1-204ENST00000445623 YY1AP1Q9H869 796 aa11.94□□□□□ -0.5
TIMP1-204ENST00000445623 SERINC1Q9NRX5 453 aa11.94□□□□□ -0.5
TIMP1-204ENST00000445623 RPH3AQ9Y2J0 694 aaPredicted RBP11.94□□□□□ -0.5
TIMP1-204ENST00000445623 SPIN1Q9Y657 262 aaPredicted RBP11.94□□□□□ -0.5
TIMP1-204ENST00000445623 PCNX3Q9H6A9 2034 aa11.94□□□□□ -0.5
TIMP1-204ENST00000445623 ATMQ13315 3056 aa11.93□□□□□ -0.5
TIMP1-204ENST00000445623 TCRBV3S1A0A5B6 114 aa11.93□□□□□ -0.5
TIMP1-204ENST00000445623 CPSF4LA6NMK7 179 aaKnown RBP11.93□□□□□ -0.5
TIMP1-204ENST00000445623 SUSD5O60279 629 aa11.93□□□□□ -0.5
TIMP1-204ENST00000445623 ZIC3O60481 467 aa11.93□□□□□ -0.5
TIMP1-204ENST00000445623 ADAM11O75078 769 aa11.93□□□□□ -0.5
TIMP1-204ENST00000445623 IGHG3P01860 377 aa11.93□□□□□ -0.5
TIMP1-204ENST00000445623 CELA3AP09093 270 aa11.93□□□□□ -0.5
TIMP1-204ENST00000445623 RAP2AP10114 183 aa11.93□□□□□ -0.5
TIMP1-204ENST00000445623 TCEA1P23193 301 aaKnown RBP11.93□□□□□ -0.5
TIMP1-204ENST00000445623 CHMP24386 653 aa11.93□□□□□ -0.5
TIMP1-204ENST00000445623 FKBP2P26885 142 aaKnown RBP11.93□□□□□ -0.5
TIMP1-204ENST00000445623 POLR2HP52434 150 aaKnown RBP11.93□□□□□ -0.5
TIMP1-204ENST00000445623 MAP2K6P52564 334 aa11.93□□□□□ -0.5
TIMP1-204ENST00000445623 DLX5P56178 289 aa11.93□□□□□ -0.5
TIMP1-204ENST00000445623 TAS2R41P59536 307 aa11.93□□□□□ -0.5
TIMP1-204ENST00000445623 MERTKQ12866 999 aa11.93□□□□□ -0.5
TIMP1-204ENST00000445623 OR1Q1Q15612 314 aa11.93□□□□□ -0.5
TIMP1-204ENST00000445623 TOMM34Q15785 309 aaPredicted RBP11.93□□□□□ -0.5
TIMP1-204ENST00000445623 NPTX1Q15818 432 aa11.93□□□□□ -0.5
TIMP1-204ENST00000445623 COLEC12Q5KU26 742 aa11.93□□□□□ -0.5
TIMP1-204ENST00000445623 ENTPD8Q5MY95 495 aa11.93□□□□□ -0.5
TIMP1-204ENST00000445623 SWT1Q5T5J6 900 aaKnown RBP11.93□□□□□ -0.5
TIMP1-204ENST00000445623 ZNF324BQ6AW86 544 aaPredicted RBP11.93□□□□□ -0.5
TIMP1-204ENST00000445623 ARHGAP11AQ6P4F7 1023 aa11.93□□□□□ -0.5
TIMP1-204ENST00000445623 ULK3Q6PHR2 472 aa11.93□□□□□ -0.5
TIMP1-204ENST00000445623 TRILQ7L0X0 811 aa11.93□□□□□ -0.5
TIMP1-204ENST00000445623 FAM86B1Q8N7N1 296 aa11.93□□□□□ -0.5
TIMP1-204ENST00000445623 OR4D11Q8NGI4 311 aa11.93□□□□□ -0.5
TIMP1-204ENST00000445623 NEIL3Q8TAT5 605 aa11.93□□□□□ -0.5
TIMP1-204ENST00000445623 CPT1CQ8TCG5 803 aa11.93□□□□□ -0.5
TIMP1-204ENST00000445623 ADAMTS16Q8TE57 1224 aa11.93□□□□□ -0.5
TIMP1-204ENST00000445623 PRRC1Q96M27 445 aa11.93□□□□□ -0.5
TIMP1-204ENST00000445623 AMBRA1Q9C0C7 1298 aa11.93□□□□□ -0.5
TIMP1-204ENST00000445623 TSPAN10Q9H1Z9 355 aaPredicted RBP11.93□□□□□ -0.5
TIMP1-204ENST00000445623 SLC6A15Q9H2J7 730 aa11.93□□□□□ -0.5
TIMP1-204ENST00000445623 C12orf10Q9HB07 376 aa11.93□□□□□ -0.5
TIMP1-204ENST00000445623 IL1RAPQ9NPH3 570 aa11.93□□□□□ -0.5
TIMP1-204ENST00000445623 AURKCQ9UQB9 309 aa11.93□□□□□ -0.5
TIMP1-204ENST00000445623 ENPP4Q9Y6X5 453 aa11.93□□□□□ -0.5
TIMP1-204ENST00000445623 SPTA1P02549 2419 aa11.93□□□□□ -0.5
TIMP1-204ENST00000445623 FREM3P0C091 2139 aa11.93□□□□□ -0.5
TIMP1-204ENST00000445623 A0A0B4J2E0 115 aa11.92□□□□□ -0.5
TIMP1-204ENST00000445623 A0A1B0GWA3 101 aa11.92□□□□□ -0.5
TIMP1-204ENST00000445623 A0A1B0GX12 115 aa11.92□□□□□ -0.5
TIMP1-204ENST00000445623 OR2M5A3KFT3 312 aa11.92□□□□□ -0.5
TIMP1-204ENST00000445623 TRAPPC13A5PLN9 417 aa11.92□□□□□ -0.5
TIMP1-204ENST00000445623 GJE1A6NN92 205 aa11.92□□□□□ -0.5
TIMP1-204ENST00000445623 AQP7O14520 342 aa11.92□□□□□ -0.5
TIMP1-204ENST00000445623 OR5F1O95221 314 aa11.92□□□□□ -0.5
TIMP1-204ENST00000445623 ACTL6AO96019 429 aa11.92□□□□□ -0.5
TIMP1-204ENST00000445623 SEMG1P04279 462 aa11.92□□□□□ -0.5
TIMP1-204ENST00000445623 THRBP10828 461 aa11.92□□□□□ -0.5
TIMP1-204ENST00000445623 PNMTP11086 282 aa11.92□□□□□ -0.5
TIMP1-204ENST00000445623 RHCEP18577 417 aa11.92□□□□□ -0.5
TIMP1-204ENST00000445623 CXCR1P25024 350 aa11.92□□□□□ -0.5
TIMP1-204ENST00000445623 MST1P26927 711 aa11.92□□□□□ -0.5
TIMP1-204ENST00000445623 HTR2AP28223 471 aa11.92□□□□□ -0.5
TIMP1-204ENST00000445623 TACR3P29371 465 aa11.92□□□□□ -0.5
TIMP1-204ENST00000445623 ACTR3P61158 418 aa11.92□□□□□ -0.5
TIMP1-204ENST00000445623 ST3GAL3Q11203 375 aa11.92□□□□□ -0.5
TIMP1-204ENST00000445623 SELENBP1Q13228 472 aa11.92□□□□□ -0.5
TIMP1-204ENST00000445623 TMEM44Q2T9K0 475 aa11.92□□□□□ -0.5
TIMP1-204ENST00000445623 ALG10BQ5I7T1 473 aa11.92□□□□□ -0.5
TIMP1-204ENST00000445623 C3orf33Q6P1S2 294 aa11.92□□□□□ -0.5
TIMP1-204ENST00000445623 RBM45Q8IUH3 476 aaKnown RBP11.92□□□□□ -0.5
TIMP1-204ENST00000445623 ZDHHC21Q8IVQ6 265 aa11.92□□□□□ -0.5
TIMP1-204ENST00000445623 RNF217Q8TC41 542 aa11.92□□□□□ -0.5
TIMP1-204ENST00000445623 PHF10Q8WUB8 498 aaKnown RBP11.92□□□□□ -0.5
TIMP1-204ENST00000445623 SARAFQ96BY9 339 aa11.92□□□□□ -0.5
TIMP1-204ENST00000445623 ZNF347Q96SE7 839 aa11.92□□□□□ -0.5
TIMP1-204ENST00000445623 SLX1AQ9BQ83 275 aa11.92□□□□□ -0.5
TIMP1-204ENST00000445623 KLHDC3Q9BQ90 382 aa11.92□□□□□ -0.5
TIMP1-204ENST00000445623 WFDC6Q9BQY6 131 aa11.92□□□□□ -0.5
TIMP1-204ENST00000445623 FNDC11Q9BVV2 318 aa11.92□□□□□ -0.5
TIMP1-204ENST00000445623 ADAM19Q9H013 955 aa11.92□□□□□ -0.5
TIMP1-204ENST00000445623 PLSCR2Q9NRY7 297 aa11.92□□□□□ -0.5
TIMP1-204ENST00000445623 ASF1BQ9NVP2 202 aa11.92□□□□□ -0.5
TIMP1-204ENST00000445623 NTNG1Q9Y2I2 539 aa11.92□□□□□ -0.5
TIMP1-204ENST00000445623 AP4B1Q9Y6B7 739 aa11.92□□□□□ -0.5
TIMP1-204ENST00000445623 ATRXP46100 2492 aa11.91□□□□□ -0.5
TIMP1-204ENST00000445623 A0A1B0GVC2 190 aa11.91□□□□□ -0.5
TIMP1-204ENST00000445623 OR14I1A6ND48 311 aa11.91□□□□□ -0.5
TIMP1-204ENST00000445623 ELOA3DA6NLF2 546 aaPredicted RBP11.91□□□□□ -0.5
TIMP1-204ENST00000445623 hCG_2039718K7EN88 272 aa11.91□□□□□ -0.5
TIMP1-204ENST00000445623 CHP2O43745 196 aa11.91□□□□□ -0.5
TIMP1-204ENST00000445623 TPST2O60704 377 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms