RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 CAPRIN1Q14444 709 aaKnown RBP18.69■□□□□ 0.58
VSX1-206ENST00000444511 P2RY6Q15077 328 aa18.69■□□□□ 0.58
VSX1-206ENST00000444511 ANXA8L1Q5VT79 327 aa18.69■□□□□ 0.58
VSX1-206ENST00000444511 ANKRD46Q86W74 232 aa18.69■□□□□ 0.58
VSX1-206ENST00000444511 ZNF619Q8N2I2 560 aa18.69■□□□□ 0.58
VSX1-206ENST00000444511 MREGQ8N565 214 aa18.69■□□□□ 0.58
VSX1-206ENST00000444511 MIPOL1Q8TD10 442 aa18.69■□□□□ 0.58
VSX1-206ENST00000444511 IGFBPL1Q8WX77 278 aa18.69■□□□□ 0.58
VSX1-206ENST00000444511 TMEM234Q8WY98 164 aa18.69■□□□□ 0.58
VSX1-206ENST00000444511 HSD17B8Q92506 261 aa18.69■□□□□ 0.58
VSX1-206ENST00000444511 BCO1Q9HAY6 547 aa18.69■□□□□ 0.58
VSX1-206ENST00000444511 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.69■□□□□ 0.58
VSX1-206ENST00000444511 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.69■□□□□ 0.58
VSX1-206ENST00000444511 V9GYY5 206 aaPredicted RBP18.69■□□□□ 0.58
VSX1-206ENST00000444511 RAI1Q7Z5J4 1906 aaPredicted RBP18.68■□□□□ 0.58
VSX1-206ENST00000444511 NAV3Q8IVL0 2385 aa18.68■□□□□ 0.58
VSX1-206ENST00000444511 CENPVL1A0A0U1RR11 272 aa18.68■□□□□ 0.58
VSX1-206ENST00000444511 PRSS51A0A1B0GVH4 220 aa18.68■□□□□ 0.58
VSX1-206ENST00000444511 TM9SF1O15321 606 aa18.68■□□□□ 0.58
VSX1-206ENST00000444511 H6PDO95479 791 aa18.68■□□□□ 0.58
VSX1-206ENST00000444511 OR12D1P0DN82 309 aa18.68■□□□□ 0.58
VSX1-206ENST00000444511 UQCRC2P22695 453 aa18.68■□□□□ 0.58
VSX1-206ENST00000444511 SLC1A6P48664 564 aa18.68■□□□□ 0.58
VSX1-206ENST00000444511 RPL14P50914 215 aaKnown RBP18.68■□□□□ 0.58
VSX1-206ENST00000444511 SESN3P58005 492 aa18.68■□□□□ 0.58
VSX1-206ENST00000444511 RASGEF1BQ0VAM2 473 aa18.68■□□□□ 0.58
VSX1-206ENST00000444511 MERTKQ12866 999 aa18.68■□□□□ 0.58
VSX1-206ENST00000444511 ITGADQ13349 1161 aa18.68■□□□□ 0.58
VSX1-206ENST00000444511 TAB1Q15750 504 aa18.68■□□□□ 0.58
VSX1-206ENST00000444511 HEPHL1Q6MZM0 1159 aa18.68■□□□□ 0.58
VSX1-206ENST00000444511 TNFAIP8L2Q6P589 184 aaPredicted RBP18.68■□□□□ 0.58
VSX1-206ENST00000444511 RAB3IL1Q8TBN0 382 aa18.68■□□□□ 0.58
VSX1-206ENST00000444511 XAGE5Q8WWM1 108 aa18.68■□□□□ 0.58
VSX1-206ENST00000444511 USB1Q9BQ65 265 aaKnown RBP18.68■□□□□ 0.58
VSX1-206ENST00000444511 PSD2Q9BQI7 771 aa18.68■□□□□ 0.58
VSX1-206ENST00000444511 ESRP2Q9H6T0 727 aaKnown RBP18.68■□□□□ 0.58
VSX1-206ENST00000444511 SSU72Q9NP77 194 aaKnown RBP18.68■□□□□ 0.58
VSX1-206ENST00000444511 ZNF701Q9NV72 531 aaPredicted RBP18.68■□□□□ 0.58
VSX1-206ENST00000444511 WDR45Q9Y484 360 aa18.68■□□□□ 0.58
VSX1-206ENST00000444511 RNF115Q9Y4L5 304 aa18.68■□□□□ 0.58
VSX1-206ENST00000444511 ARID1AO14497 2285 aa18.67■□□□□ 0.58
VSX1-206ENST00000444511 SMAD9O15198 467 aaKnown RBP18.67■□□□□ 0.58
VSX1-206ENST00000444511 CLOCKO15516 846 aa18.67■□□□□ 0.58
VSX1-206ENST00000444511 KIAA0513O60268 411 aa18.67■□□□□ 0.58
VSX1-206ENST00000444511 DNAJA2O60884 412 aa18.67■□□□□ 0.58
VSX1-206ENST00000444511 CNOT4O95628 575 aaKnown RBP18.67■□□□□ 0.58
VSX1-206ENST00000444511 PAX1P15863 534 aa18.67■□□□□ 0.58
VSX1-206ENST00000444511 OR3A2P47893 321 aa18.67■□□□□ 0.58
VSX1-206ENST00000444511 KIRREL3Q8IZU9 778 aa18.67■□□□□ 0.58
VSX1-206ENST00000444511 RAB8BQ92930 207 aa18.67■□□□□ 0.58
VSX1-206ENST00000444511 TESCQ96BS2 214 aa18.67■□□□□ 0.58
VSX1-206ENST00000444511 POTEKPQ9BYX7 375 aa18.67■□□□□ 0.58
VSX1-206ENST00000444511 C20orf27Q9GZN8 174 aa18.67■□□□□ 0.58
VSX1-206ENST00000444511 CENPHQ9H3R5 247 aa18.67■□□□□ 0.58
VSX1-206ENST00000444511 POLE3Q9NRF9 147 aa18.67■□□□□ 0.58
VSX1-206ENST00000444511 ACER3Q9NUN7 267 aa18.67■□□□□ 0.58
VSX1-206ENST00000444511 ING1Q9UK53 422 aaPredicted RBP18.67■□□□□ 0.58
VSX1-206ENST00000444511 DSCAMO60469 2012 aa18.67■□□□□ 0.58
VSX1-206ENST00000444511 ZNF814B7Z6K7 855 aa18.66■□□□□ 0.58
VSX1-206ENST00000444511 C9JVG2 144 aa18.66■□□□□ 0.58
VSX1-206ENST00000444511 CYTIPO60759 359 aa18.66■□□□□ 0.58
VSX1-206ENST00000444511 SCN2BO60939 215 aa18.66■□□□□ 0.58
VSX1-206ENST00000444511 CD3EP07766 207 aa18.66■□□□□ 0.58
VSX1-206ENST00000444511 LBPP18428 481 aa18.66■□□□□ 0.58
VSX1-206ENST00000444511 CHI3L1P36222 383 aaPredicted RBP18.66■□□□□ 0.58
VSX1-206ENST00000444511 DIO1P49895 249 aa18.66■□□□□ 0.58
VSX1-206ENST00000444511 KHKP50053 298 aa18.66■□□□□ 0.58
VSX1-206ENST00000444511 CLNS1AP54105 237 aaKnown RBP18.66■□□□□ 0.58
VSX1-206ENST00000444511 ATP5J2P56134 94 aa18.66■□□□□ 0.58
VSX1-206ENST00000444511 CSNK2A1P68400 391 aaPredicted RBP18.66■□□□□ 0.58
VSX1-206ENST00000444511 MAPK14Q16539 360 aa18.66■□□□□ 0.58
VSX1-206ENST00000444511 DPY19L1Q2PZI1 675 aa18.66■□□□□ 0.58
VSX1-206ENST00000444511 NCMAPQ5T1S8 102 aa18.66■□□□□ 0.58
VSX1-206ENST00000444511 ADAM5Q6NVV9 412 aa18.66■□□□□ 0.58
VSX1-206ENST00000444511 Q6ZT83 130 aa18.66■□□□□ 0.58
VSX1-206ENST00000444511 BHLHA15Q7RTS1 189 aaPredicted RBP18.66■□□□□ 0.58
VSX1-206ENST00000444511 ZNF563Q8TA94 476 aa18.66■□□□□ 0.58
VSX1-206ENST00000444511 SLC25A43Q8WUT9 341 aaPredicted RBP18.66■□□□□ 0.58
VSX1-206ENST00000444511 OIT3Q8WWZ8 545 aa18.66■□□□□ 0.58
VSX1-206ENST00000444511 ZNF775Q96BV0 537 aaPredicted RBP18.66■□□□□ 0.58
VSX1-206ENST00000444511 ROPN1LQ96C74 230 aa18.66■□□□□ 0.58
VSX1-206ENST00000444511 SORT1Q99523 831 aa18.66■□□□□ 0.58
VSX1-206ENST00000444511 NUF2Q9BZD4 464 aa18.66■□□□□ 0.58
VSX1-206ENST00000444511 PRSS50Q9UI38 385 aa18.66■□□□□ 0.58
VSX1-206ENST00000444511 LAMP3Q9UQV4 416 aa18.66■□□□□ 0.58
VSX1-206ENST00000444511 SLC35A3Q9Y2D2 325 aa18.66■□□□□ 0.58
VSX1-206ENST00000444511 SPIN1Q9Y657 262 aaPredicted RBP18.66■□□□□ 0.58
VSX1-206ENST00000444511 SULT2B1O00204 365 aa18.65■□□□□ 0.58
VSX1-206ENST00000444511 FESP07332 822 aa18.65■□□□□ 0.58
VSX1-206ENST00000444511 GUSBP08236 651 aa18.65■□□□□ 0.58
VSX1-206ENST00000444511 DHRS4L1P0CG22 281 aa18.65■□□□□ 0.58
VSX1-206ENST00000444511 TFPIP10646 304 aa18.65■□□□□ 0.58
VSX1-206ENST00000444511 BGNP21810 368 aa18.65■□□□□ 0.58
VSX1-206ENST00000444511 RPS4XP62701 263 aaKnown RBP18.65■□□□□ 0.58
VSX1-206ENST00000444511 PHC1P78364 1004 aa18.65■□□□□ 0.58
VSX1-206ENST00000444511 HPCAP84074 193 aa18.65■□□□□ 0.58
VSX1-206ENST00000444511 SYT14P1Q58G82 188 aa18.65■□□□□ 0.58
VSX1-206ENST00000444511 SPANXN4Q5MJ08 99 aa18.65■□□□□ 0.58
VSX1-206ENST00000444511 SAXO2Q658L1 398 aa18.65■□□□□ 0.58
VSX1-206ENST00000444511 TYW3Q6IPR3 259 aaKnown RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms