RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 ACTC1P68032 377 aa13.05□□□□□ -0.32
SMARCA4-204ENST00000444061 ACTA1P68133 377 aa13.05□□□□□ -0.32
SMARCA4-204ENST00000444061 SLC3A1Q07837 685 aa13.05□□□□□ -0.32
SMARCA4-204ENST00000444061 TIGD6Q17RP2 521 aa13.05□□□□□ -0.32
SMARCA4-204ENST00000444061 PYDC2Q56P42 97 aa13.05□□□□□ -0.32
SMARCA4-204ENST00000444061 PSD4Q8NDX1 1056 aa13.05□□□□□ -0.32
SMARCA4-204ENST00000444061 TTYH2Q9BSA4 534 aa13.05□□□□□ -0.32
SMARCA4-204ENST00000444061 CCDC86Q9H6F5 360 aaKnown RBP13.05□□□□□ -0.32
SMARCA4-204ENST00000444061 C2orf42Q9NWW7 574 aa13.05□□□□□ -0.32
SMARCA4-204ENST00000444061 CLEC4AQ9UMR7 237 aa13.05□□□□□ -0.32
SMARCA4-204ENST00000444061 SYT5O00445 386 aa13.05□□□□□ -0.32
SMARCA4-204ENST00000444061 ECDO95905 644 aaPredicted RBP13.05□□□□□ -0.32
SMARCA4-204ENST00000444061 GGT2P36268 569 aa13.05□□□□□ -0.32
SMARCA4-204ENST00000444061 PDE7AQ13946 482 aa13.05□□□□□ -0.32
SMARCA4-204ENST00000444061 ISXQ2M1V0 245 aa13.05□□□□□ -0.32
SMARCA4-204ENST00000444061 VN1R4Q7Z5H5 301 aa13.05□□□□□ -0.32
SMARCA4-204ENST00000444061 SLC25A45Q8N413 288 aa13.05□□□□□ -0.32
SMARCA4-204ENST00000444061 ZNF420Q8TAQ5 688 aaPredicted RBP13.05□□□□□ -0.32
SMARCA4-204ENST00000444061 SAP25Q8TEE9 199 aa13.05□□□□□ -0.32
SMARCA4-204ENST00000444061 HTRA1Q92743 480 aa13.05□□□□□ -0.32
SMARCA4-204ENST00000444061 CNRIP1Q96F85 164 aaPredicted RBP13.05□□□□□ -0.32
SMARCA4-204ENST00000444061 LRR1Q96L50 414 aa13.05□□□□□ -0.32
SMARCA4-204ENST00000444061 ZNF768Q9H5H4 540 aaKnown RBP13.05□□□□□ -0.32
SMARCA4-204ENST00000444061 TMEM38AQ9H6F2 299 aa13.05□□□□□ -0.32
SMARCA4-204ENST00000444061 EXOSC1Q9Y3B2 195 aaKnown RBP13.05□□□□□ -0.32
SMARCA4-204ENST00000444061 EMC9Q9Y3B6 208 aa13.05□□□□□ -0.32
SMARCA4-204ENST00000444061 IER3IP1Q9Y5U9 82 aa13.05□□□□□ -0.32
SMARCA4-204ENST00000444061 TMED7-TICAM2A0A0A6YYA0 188 aa13.05□□□□□ -0.32
SMARCA4-204ENST00000444061 PEG10Q86TG7 708 aaKnown RBP13.05□□□□□ -0.32
SMARCA4-204ENST00000444061 ANKK1Q8NFD2 765 aa13.05□□□□□ -0.32
SMARCA4-204ENST00000444061 FAM122AQ96E09 287 aa13.05□□□□□ -0.32
SMARCA4-204ENST00000444061 MND1Q9BWT6 205 aa13.05□□□□□ -0.32
SMARCA4-204ENST00000444061 ENKD1Q9H0I2 346 aa13.05□□□□□ -0.32
SMARCA4-204ENST00000444061 PARPBPQ9NWS1 579 aa13.05□□□□□ -0.32
SMARCA4-204ENST00000444061 TMED7Q9Y3B3 224 aa13.05□□□□□ -0.32
SMARCA4-204ENST00000444061 ZNF337Q9Y3M9 751 aa13.05□□□□□ -0.32
SMARCA4-204ENST00000444061 RHAGQ02094 409 aa13.05□□□□□ -0.32
SMARCA4-204ENST00000444061 SSPNQ14714 243 aa13.05□□□□□ -0.32
SMARCA4-204ENST00000444061 TCTN3Q6NUS6 607 aa13.05□□□□□ -0.32
SMARCA4-204ENST00000444061 SYT14Q8NB59 555 aa13.05□□□□□ -0.32
SMARCA4-204ENST00000444061 WDR34Q96EX3 536 aa13.05□□□□□ -0.32
SMARCA4-204ENST00000444061 MRPL39Q9NYK5 338 aaKnown RBP13.05□□□□□ -0.32
SMARCA4-204ENST00000444061 ABCA7Q8IZY2 2146 aa13.04□□□□□ -0.32
SMARCA4-204ENST00000444061 TAS2R43P59537 309 aa13.04□□□□□ -0.32
SMARCA4-204ENST00000444061 RNF4P78317 190 aa13.04□□□□□ -0.32
SMARCA4-204ENST00000444061 SLC35A1P78382 337 aa13.04□□□□□ -0.32
SMARCA4-204ENST00000444061 POU3F1Q03052 451 aaPredicted RBP13.04□□□□□ -0.32
SMARCA4-204ENST00000444061 RIPPLY1Q0D2K3 151 aa13.04□□□□□ -0.32
SMARCA4-204ENST00000444061 VASH2Q86V25 355 aa13.04□□□□□ -0.32
SMARCA4-204ENST00000444061 ADGRG5Q8IZF4 528 aa13.04□□□□□ -0.32
SMARCA4-204ENST00000444061 CLIP4Q8N3C7 705 aa13.04□□□□□ -0.32
SMARCA4-204ENST00000444061 SDF2Q99470 211 aa13.04□□□□□ -0.32
SMARCA4-204ENST00000444061 ZNF99A8MXY4 864 aaPredicted RBP13.04□□□□□ -0.32
SMARCA4-204ENST00000444061 CLIC3O95833 236 aa13.04□□□□□ -0.32
SMARCA4-204ENST00000444061 DHFRP00374 187 aa13.04□□□□□ -0.32
SMARCA4-204ENST00000444061 PCBP4P57723 403 aaKnown RBP13.04□□□□□ -0.32
SMARCA4-204ENST00000444061 POU4F2Q12837 409 aa13.04□□□□□ -0.32
SMARCA4-204ENST00000444061 SFTPA2Q8IWL1 248 aa13.04□□□□□ -0.32
SMARCA4-204ENST00000444061 NUDT8Q8WV74 236 aa13.04□□□□□ -0.32
SMARCA4-204ENST00000444061 PGAM5Q96HS1 289 aa13.04□□□□□ -0.32
SMARCA4-204ENST00000444061 SECISBP2Q96T21 854 aaKnown RBP13.04□□□□□ -0.32
SMARCA4-204ENST00000444061 ARMC1Q9NVT9 282 aa13.04□□□□□ -0.32
SMARCA4-204ENST00000444061 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.04□□□□□ -0.32
SMARCA4-204ENST00000444061 H0YAE9 185 aa13.04□□□□□ -0.32
SMARCA4-204ENST00000444061 C8BP07358 591 aa13.04□□□□□ -0.32
SMARCA4-204ENST00000444061 PRPH2P23942 346 aa13.04□□□□□ -0.32
SMARCA4-204ENST00000444061 CARD18P57730 90 aa13.04□□□□□ -0.32
SMARCA4-204ENST00000444061 SCN1BQ07699 218 aa13.04□□□□□ -0.32
SMARCA4-204ENST00000444061 MAP4K2Q12851 820 aa13.04□□□□□ -0.32
SMARCA4-204ENST00000444061 MALLQ13021 153 aa13.04□□□□□ -0.32
SMARCA4-204ENST00000444061 AIMP2Q13155 320 aaKnown RBP13.04□□□□□ -0.32
SMARCA4-204ENST00000444061 PLBD1Q6P4A8 553 aa13.04□□□□□ -0.32
SMARCA4-204ENST00000444061 QSOX2Q6ZRP7 698 aa13.04□□□□□ -0.32
SMARCA4-204ENST00000444061 OLIG3Q7RTU3 272 aa13.04□□□□□ -0.32
SMARCA4-204ENST00000444061 CPNE2Q96FN4 548 aaPredicted RBP13.04□□□□□ -0.32
SMARCA4-204ENST00000444061 NXF5Q9H1B4 397 aaKnown RBP13.04□□□□□ -0.32
SMARCA4-204ENST00000444061 PRRG2O14669 202 aa13.03□□□□□ -0.32
SMARCA4-204ENST00000444061 MVKQ03426 396 aa13.03□□□□□ -0.32
SMARCA4-204ENST00000444061 MXD1Q05195 221 aa13.03□□□□□ -0.32
SMARCA4-204ENST00000444061 CSRP2Q16527 193 aa13.03□□□□□ -0.32
SMARCA4-204ENST00000444061 SAXO2Q658L1 398 aa13.03□□□□□ -0.32
SMARCA4-204ENST00000444061 PODNL1Q6PEZ8 512 aa13.03□□□□□ -0.32
SMARCA4-204ENST00000444061 LRFN4Q6PJG9 635 aa13.03□□□□□ -0.32
SMARCA4-204ENST00000444061 BCORP1Q8N888 145 aa13.03□□□□□ -0.32
SMARCA4-204ENST00000444061 SLC35A4Q96G79 324 aa13.03□□□□□ -0.32
SMARCA4-204ENST00000444061 RLIMQ9NVW2 624 aa13.03□□□□□ -0.32
SMARCA4-204ENST00000444061 A0A1B0GWA3 101 aa13.03□□□□□ -0.32
SMARCA4-204ENST00000444061 A0A1W2PR77 199 aa13.03□□□□□ -0.32
SMARCA4-204ENST00000444061 PLOD3O60568 738 aa13.03□□□□□ -0.32
SMARCA4-204ENST00000444061 APOL3O95236 402 aa13.03□□□□□ -0.32
SMARCA4-204ENST00000444061 CD79AP11912 226 aa13.03□□□□□ -0.32
SMARCA4-204ENST00000444061 IL32P24001 234 aa13.03□□□□□ -0.32
SMARCA4-204ENST00000444061 NUBP1P53384 320 aa13.03□□□□□ -0.32
SMARCA4-204ENST00000444061 RIN1Q13671 783 aa13.03□□□□□ -0.32
SMARCA4-204ENST00000444061 TUBA3CQ13748 450 aa13.03□□□□□ -0.32
SMARCA4-204ENST00000444061 MUS81Q96NY9 551 aa13.03□□□□□ -0.32
SMARCA4-204ENST00000444061 KHDRBS3O75525 346 aaKnown RBP13.03□□□□□ -0.32
SMARCA4-204ENST00000444061 ARL6IP5O75915 188 aa13.03□□□□□ -0.32
SMARCA4-204ENST00000444061 SORBS2O94875 1100 aaKnown RBP13.03□□□□□ -0.32
SMARCA4-204ENST00000444061 C7P10643 843 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms