RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 H6PDO95479 791 aa17.73■□□□□ 0.43
SHROOM1-204ENST00000440118 GSNP06396 782 aa17.73■□□□□ 0.43
SHROOM1-204ENST00000440118 PPP3CBP16298 524 aa17.73■□□□□ 0.43
SHROOM1-204ENST00000440118 CRYGSP22914 178 aa17.73■□□□□ 0.43
SHROOM1-204ENST00000440118 RYKP34925 604 aa17.73■□□□□ 0.43
SHROOM1-204ENST00000440118 TXNL4AP83876 142 aaKnown RBP17.73■□□□□ 0.43
SHROOM1-204ENST00000440118 PDCD4Q53EL6 469 aaKnown RBP17.73■□□□□ 0.43
SHROOM1-204ENST00000440118 FRRS1Q6ZNA5 592 aa17.73■□□□□ 0.43
SHROOM1-204ENST00000440118 PIWIL2Q8TC59 973 aaKnown RBP17.73■□□□□ 0.43
SHROOM1-204ENST00000440118 INPP5KQ9BT40 448 aa17.73■□□□□ 0.43
SHROOM1-204ENST00000440118 QRSL1Q9H0R6 528 aaKnown RBP17.73■□□□□ 0.43
SHROOM1-204ENST00000440118 COQ10BQ9H8M1 238 aa17.73■□□□□ 0.43
SHROOM1-204ENST00000440118 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.73■□□□□ 0.43
SHROOM1-204ENST00000440118 KLHL13Q9P2N7 655 aa17.73■□□□□ 0.43
SHROOM1-204ENST00000440118 KCNE5Q9UJ90 142 aa17.73■□□□□ 0.43
SHROOM1-204ENST00000440118 LIPT1Q9Y234 373 aa17.73■□□□□ 0.43
SHROOM1-204ENST00000440118 SPIN1Q9Y657 262 aaPredicted RBP17.73■□□□□ 0.43
SHROOM1-204ENST00000440118 SLC22A3O75751 556 aa17.72■□□□□ 0.43
SHROOM1-204ENST00000440118 PRKD3O94806 890 aa17.72■□□□□ 0.43
SHROOM1-204ENST00000440118 KRT75O95678 551 aa17.72■□□□□ 0.43
SHROOM1-204ENST00000440118 IL6P05231 212 aa17.72■□□□□ 0.43
SHROOM1-204ENST00000440118 NR2F1P10589 423 aa17.72■□□□□ 0.43
SHROOM1-204ENST00000440118 TFPIP10646 304 aa17.72■□□□□ 0.43
SHROOM1-204ENST00000440118 SESN3P58005 492 aa17.72■□□□□ 0.43
SHROOM1-204ENST00000440118 GNA13Q14344 377 aa17.72■□□□□ 0.43
SHROOM1-204ENST00000440118 DEFB113Q30KQ7 82 aa17.72■□□□□ 0.43
SHROOM1-204ENST00000440118 SLC25A53Q5H9E4 307 aa17.72■□□□□ 0.43
SHROOM1-204ENST00000440118 SLC43A2Q8N370 569 aa17.72■□□□□ 0.43
SHROOM1-204ENST00000440118 ARFGAP2Q8N6H7 521 aa17.72■□□□□ 0.43
SHROOM1-204ENST00000440118 MBD6Q96DN6 1003 aa17.72■□□□□ 0.43
SHROOM1-204ENST00000440118 TACO1Q9BSH4 297 aaKnown RBP17.72■□□□□ 0.43
SHROOM1-204ENST00000440118 CXXC4Q9H2H0 198 aa17.72■□□□□ 0.43
SHROOM1-204ENST00000440118 RMND5AQ9H871 391 aa17.72■□□□□ 0.43
SHROOM1-204ENST00000440118 UBTD1Q9HAC8 227 aa17.72■□□□□ 0.43
SHROOM1-204ENST00000440118 ARGLU1Q9NWB6 273 aaPredicted RBP17.72■□□□□ 0.43
SHROOM1-204ENST00000440118 KLHL9Q9P2J3 617 aa17.72■□□□□ 0.43
SHROOM1-204ENST00000440118 MTORP42345 2549 aa17.72■□□□□ 0.43
SHROOM1-204ENST00000440118 IGHV3-15A0A0B4J1V0 119 aa17.71■□□□□ 0.43
SHROOM1-204ENST00000440118 HMGN4O00479 90 aa17.71■□□□□ 0.43
SHROOM1-204ENST00000440118 UBDO15205 165 aa17.71■□□□□ 0.43
SHROOM1-204ENST00000440118 EFNA2O43921 213 aa17.71■□□□□ 0.43
SHROOM1-204ENST00000440118 GUSBP08236 651 aa17.71■□□□□ 0.43
SHROOM1-204ENST00000440118 CD99P14209 185 aa17.71■□□□□ 0.43
SHROOM1-204ENST00000440118 ENPP1P22413 925 aa17.71■□□□□ 0.43
SHROOM1-204ENST00000440118 IL12AP29459 219 aa17.71■□□□□ 0.43
SHROOM1-204ENST00000440118 CDKN2CP42773 168 aa17.71■□□□□ 0.43
SHROOM1-204ENST00000440118 CHRNEQ04844 493 aa17.71■□□□□ 0.43
SHROOM1-204ENST00000440118 FUT5Q11128 374 aa17.71■□□□□ 0.43
SHROOM1-204ENST00000440118 MAPK14Q16539 360 aa17.71■□□□□ 0.43
SHROOM1-204ENST00000440118 GSTA3Q16772 222 aa17.71■□□□□ 0.43
SHROOM1-204ENST00000440118 SLC9B1Q4ZJI4 515 aa17.71■□□□□ 0.43
SHROOM1-204ENST00000440118 ALKBH2Q6NS38 261 aa17.71■□□□□ 0.43
SHROOM1-204ENST00000440118 WFDC8Q8IUA0 241 aa17.71■□□□□ 0.43
SHROOM1-204ENST00000440118 TUSC5Q8IXB3 177 aa17.71■□□□□ 0.43
SHROOM1-204ENST00000440118 GOLGA6L1Q8N7Z2 621 aa17.71■□□□□ 0.43
SHROOM1-204ENST00000440118 SLC25A43Q8WUT9 341 aaPredicted RBP17.71■□□□□ 0.43
SHROOM1-204ENST00000440118 ACTR6Q9GZN1 396 aa17.71■□□□□ 0.43
SHROOM1-204ENST00000440118 CACYBPQ9HB71 228 aaKnown RBP17.71■□□□□ 0.43
SHROOM1-204ENST00000440118 DEFB108AA8MXU0 73 aa17.7■□□□□ 0.42
SHROOM1-204ENST00000440118 NTN1O95631 604 aa17.7■□□□□ 0.42
SHROOM1-204ENST00000440118 UQCRBP14927 111 aa17.7■□□□□ 0.42
SHROOM1-204ENST00000440118 IL32P24001 234 aa17.7■□□□□ 0.42
SHROOM1-204ENST00000440118 PGM1P36871 562 aa17.7■□□□□ 0.42
SHROOM1-204ENST00000440118 RAC3P60763 192 aa17.7■□□□□ 0.42
SHROOM1-204ENST00000440118 STX1BP61266 288 aa17.7■□□□□ 0.42
SHROOM1-204ENST00000440118 CSNK2A1P68400 391 aaPredicted RBP17.7■□□□□ 0.42
SHROOM1-204ENST00000440118 SYT14P1Q58G82 188 aa17.7■□□□□ 0.42
SHROOM1-204ENST00000440118 C6orf10Q5SRN2 563 aa17.7■□□□□ 0.42
SHROOM1-204ENST00000440118 AGBL2Q5U5Z8 902 aa17.7■□□□□ 0.42
SHROOM1-204ENST00000440118 PLEKHM3Q6ZWE6 761 aa17.7■□□□□ 0.42
SHROOM1-204ENST00000440118 TGIF2LYQ8IUE0 185 aa17.7■□□□□ 0.42
SHROOM1-204ENST00000440118 MIER2Q8N344 545 aa17.7■□□□□ 0.42
SHROOM1-204ENST00000440118 ANKFN1Q8N957 763 aa17.7■□□□□ 0.42
SHROOM1-204ENST00000440118 LRRC8CQ8TDW0 803 aa17.7■□□□□ 0.42
SHROOM1-204ENST00000440118 WDR60Q8WVS4 1066 aa17.7■□□□□ 0.42
SHROOM1-204ENST00000440118 DYDC1Q8WWB3 177 aa17.7■□□□□ 0.42
SHROOM1-204ENST00000440118 ZHX1-C8orf76Q96EF9 292 aa17.7■□□□□ 0.42
SHROOM1-204ENST00000440118 TRNT1Q96Q11 434 aaKnown RBP17.7■□□□□ 0.42
SHROOM1-204ENST00000440118 GP6Q9HCN6 339 aa17.7■□□□□ 0.42
SHROOM1-204ENST00000440118 ACER3Q9NUN7 267 aa17.7■□□□□ 0.42
SHROOM1-204ENST00000440118 ZIM2Q9NZV7 527 aa17.7■□□□□ 0.42
SHROOM1-204ENST00000440118 FLNAP21333 2647 aaKnown RBP17.7■□□□□ 0.42
SHROOM1-204ENST00000440118 FREM1Q5H8C1 2179 aa17.7■□□□□ 0.42
SHROOM1-204ENST00000440118 A0A1W2PPR1 153 aa17.69■□□□□ 0.42
SHROOM1-204ENST00000440118 TMEM247A6NEH6 219 aa17.69■□□□□ 0.42
SHROOM1-204ENST00000440118 SULT2B1O00204 365 aa17.69■□□□□ 0.42
SHROOM1-204ENST00000440118 KLF11O14901 512 aa17.69■□□□□ 0.42
SHROOM1-204ENST00000440118 IL7RP16871 459 aa17.69■□□□□ 0.42
SHROOM1-204ENST00000440118 CRATP43155 626 aa17.69■□□□□ 0.42
SHROOM1-204ENST00000440118 KCNJ10P78508 379 aa17.69■□□□□ 0.42
SHROOM1-204ENST00000440118 SYPL1Q16563 259 aa17.69■□□□□ 0.42
SHROOM1-204ENST00000440118 BEX5Q5H9J7 111 aa17.69■□□□□ 0.42
SHROOM1-204ENST00000440118 STAC2Q6ZMT1 411 aa17.69■□□□□ 0.42
SHROOM1-204ENST00000440118 GRINAQ7Z429 371 aa17.69■□□□□ 0.42
SHROOM1-204ENST00000440118 FAM71CQ8NEG0 241 aa17.69■□□□□ 0.42
SHROOM1-204ENST00000440118 ZNF75CPQ92670 426 aaPredicted RBP17.69■□□□□ 0.42
SHROOM1-204ENST00000440118 ITCHQ96J02 903 aa17.69■□□□□ 0.42
SHROOM1-204ENST00000440118 MAELQ96JY0 434 aaKnown RBP17.69■□□□□ 0.42
SHROOM1-204ENST00000440118 SAP130Q9H0E3 1048 aa17.69■□□□□ 0.42
SHROOM1-204ENST00000440118 P2RX2Q9UBL9 471 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms