RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 OLIG3Q7RTU3 272 aa16.42■□□□□ 0.22
AC004540.1-201ENST00000439120 CROCCP2Q86T23 111 aa16.42■□□□□ 0.22
AC004540.1-201ENST00000439120 LRRC34Q8IZ02 419 aa16.42■□□□□ 0.22
AC004540.1-201ENST00000439120 MIPOL1Q8TD10 442 aa16.42■□□□□ 0.22
AC004540.1-201ENST00000439120 RAB8BQ92930 207 aa16.42■□□□□ 0.22
AC004540.1-201ENST00000439120 KISS1RQ969F8 398 aaPredicted RBP16.42■□□□□ 0.22
AC004540.1-201ENST00000439120 ZBTB9Q96C00 473 aa16.42■□□□□ 0.22
AC004540.1-201ENST00000439120 Q96MF0 132 aa16.42■□□□□ 0.22
AC004540.1-201ENST00000439120 SORT1Q99523 831 aa16.42■□□□□ 0.22
AC004540.1-201ENST00000439120 SMR3AQ99954 134 aa16.42■□□□□ 0.22
AC004540.1-201ENST00000439120 SLC35A5Q9BS91 424 aa16.42■□□□□ 0.22
AC004540.1-201ENST00000439120 C20orf27Q9GZN8 174 aa16.42■□□□□ 0.22
AC004540.1-201ENST00000439120 QRSL1Q9H0R6 528 aaKnown RBP16.42■□□□□ 0.22
AC004540.1-201ENST00000439120 POLE3Q9NRF9 147 aa16.42■□□□□ 0.22
AC004540.1-201ENST00000439120 SLC35A3Q9Y2D2 325 aa16.42■□□□□ 0.22
AC004540.1-201ENST00000439120 SPIN1Q9Y657 262 aaPredicted RBP16.42■□□□□ 0.22
AC004540.1-201ENST00000439120 HEATR5AQ86XA9 2040 aa16.41■□□□□ 0.22
AC004540.1-201ENST00000439120 E9PBE3 544 aa16.41■□□□□ 0.22
AC004540.1-201ENST00000439120 KIAA0513O60268 411 aa16.41■□□□□ 0.22
AC004540.1-201ENST00000439120 NID1P14543 1247 aa16.41■□□□□ 0.22
AC004540.1-201ENST00000439120 S100A3P33764 101 aa16.41■□□□□ 0.22
AC004540.1-201ENST00000439120 SESN3P58005 492 aa16.41■□□□□ 0.22
AC004540.1-201ENST00000439120 RASGEF1BQ0VAM2 473 aa16.41■□□□□ 0.22
AC004540.1-201ENST00000439120 CAPRIN1Q14444 709 aaKnown RBP16.41■□□□□ 0.22
AC004540.1-201ENST00000439120 FAM174BQ3ZCQ3 159 aa16.41■□□□□ 0.22
AC004540.1-201ENST00000439120 GPAT3Q53EU6 434 aa16.41■□□□□ 0.22
AC004540.1-201ENST00000439120 SPANXN4Q5MJ08 99 aa16.41■□□□□ 0.22
AC004540.1-201ENST00000439120 SFRP5Q5T4F7 317 aa16.41■□□□□ 0.22
AC004540.1-201ENST00000439120 HEPHL1Q6MZM0 1159 aa16.41■□□□□ 0.22
AC004540.1-201ENST00000439120 PRSS57Q6UWY2 283 aa16.41■□□□□ 0.22
AC004540.1-201ENST00000439120 Q71RC1 249 aaPredicted RBP16.41■□□□□ 0.22
AC004540.1-201ENST00000439120 GABRG1Q8N1C3 465 aa16.41■□□□□ 0.22
AC004540.1-201ENST00000439120 ZNF563Q8TA94 476 aa16.41■□□□□ 0.22
AC004540.1-201ENST00000439120 OIT3Q8WWZ8 545 aa16.41■□□□□ 0.22
AC004540.1-201ENST00000439120 ROPN1LQ96C74 230 aa16.41■□□□□ 0.22
AC004540.1-201ENST00000439120 BDH2Q9BUT1 245 aa16.41■□□□□ 0.22
AC004540.1-201ENST00000439120 CXorf56Q9H5V9 222 aa16.41■□□□□ 0.22
AC004540.1-201ENST00000439120 MARCOQ9UEW3 520 aaPredicted RBP16.41■□□□□ 0.22
AC004540.1-201ENST00000439120 KCNE5Q9UJ90 142 aa16.41■□□□□ 0.22
AC004540.1-201ENST00000439120 RAI1Q7Z5J4 1906 aaPredicted RBP16.41■□□□□ 0.22
AC004540.1-201ENST00000439120 CENPVL1A0A0U1RR11 272 aa16.4■□□□□ 0.22
AC004540.1-201ENST00000439120 ESPNB1AK53 854 aa16.4■□□□□ 0.22
AC004540.1-201ENST00000439120 SULT2B1O00204 365 aa16.4■□□□□ 0.22
AC004540.1-201ENST00000439120 ETV2O00321 342 aaPredicted RBP16.4■□□□□ 0.22
AC004540.1-201ENST00000439120 HS3ST1O14792 307 aa16.4■□□□□ 0.22
AC004540.1-201ENST00000439120 GCM2O75603 506 aaPredicted RBP16.4■□□□□ 0.22
AC004540.1-201ENST00000439120 ADAP00813 363 aa16.4■□□□□ 0.22
AC004540.1-201ENST00000439120 TFPIP10646 304 aa16.4■□□□□ 0.22
AC004540.1-201ENST00000439120 HOXB4P17483 251 aaPredicted RBP16.4■□□□□ 0.22
AC004540.1-201ENST00000439120 NME5P56597 212 aa16.4■□□□□ 0.22
AC004540.1-201ENST00000439120 CSNK2A1P68400 391 aaPredicted RBP16.4■□□□□ 0.22
AC004540.1-201ENST00000439120 LTBQ06643 244 aa16.4■□□□□ 0.22
AC004540.1-201ENST00000439120 CASP8Q14790 479 aa16.4■□□□□ 0.22
AC004540.1-201ENST00000439120 P2RY6Q15077 328 aa16.4■□□□□ 0.22
AC004540.1-201ENST00000439120 TSC22D1Q15714 1073 aa16.4■□□□□ 0.22
AC004540.1-201ENST00000439120 SAXO2Q658L1 398 aa16.4■□□□□ 0.22
AC004540.1-201ENST00000439120 ZNF619Q8N2I2 560 aa16.4■□□□□ 0.22
AC004540.1-201ENST00000439120 TRIML2Q8N7C3 387 aa16.4■□□□□ 0.22
AC004540.1-201ENST00000439120 ANKRD42Q8N9B4 389 aa16.4■□□□□ 0.22
AC004540.1-201ENST00000439120 SLC25A43Q8WUT9 341 aaPredicted RBP16.4■□□□□ 0.22
AC004540.1-201ENST00000439120 HSD17B8Q92506 261 aa16.4■□□□□ 0.22
AC004540.1-201ENST00000439120 ZNF524Q96C55 264 aa16.4■□□□□ 0.22
AC004540.1-201ENST00000439120 NEURL3Q96EH8 262 aa16.4■□□□□ 0.22
AC004540.1-201ENST00000439120 USB1Q9BQ65 265 aaKnown RBP16.4■□□□□ 0.22
AC004540.1-201ENST00000439120 ESRP2Q9H6T0 727 aaKnown RBP16.4■□□□□ 0.22
AC004540.1-201ENST00000439120 MEAF6Q9HAF1 191 aa16.4■□□□□ 0.22
AC004540.1-201ENST00000439120 BCO1Q9HAY6 547 aa16.4■□□□□ 0.22
AC004540.1-201ENST00000439120 PNPOQ9NVS9 261 aa16.4■□□□□ 0.22
AC004540.1-201ENST00000439120 HAO1Q9UJM8 370 aa16.4■□□□□ 0.22
AC004540.1-201ENST00000439120 H7C1Q1 480 aa16.39■□□□□ 0.21
AC004540.1-201ENST00000439120 CYTIPO60759 359 aa16.39■□□□□ 0.21
AC004540.1-201ENST00000439120 SCN2BO60939 215 aa16.39■□□□□ 0.21
AC004540.1-201ENST00000439120 H6PDO95479 791 aa16.39■□□□□ 0.21
AC004540.1-201ENST00000439120 PLAUP00749 431 aa16.39■□□□□ 0.21
AC004540.1-201ENST00000439120 RYKP34925 604 aa16.39■□□□□ 0.21
AC004540.1-201ENST00000439120 APOBEC1P41238 236 aaKnown RBP16.39■□□□□ 0.21
AC004540.1-201ENST00000439120 PTH2RP49190 550 aa16.39■□□□□ 0.21
AC004540.1-201ENST00000439120 DIO1P49895 249 aa16.39■□□□□ 0.21
AC004540.1-201ENST00000439120 ANXA11P50995 505 aaKnown RBP16.39■□□□□ 0.21
AC004540.1-201ENST00000439120 BST1Q10588 318 aa16.39■□□□□ 0.21
AC004540.1-201ENST00000439120 ITGADQ13349 1161 aa16.39■□□□□ 0.21
AC004540.1-201ENST00000439120 SYT14P1Q58G82 188 aa16.39■□□□□ 0.21
AC004540.1-201ENST00000439120 TYW3Q6IPR3 259 aaKnown RBP16.39■□□□□ 0.21
AC004540.1-201ENST00000439120 AKAP1Q92667 903 aaKnown RBP eCLIP16.39■□□□□ 0.21
AC004540.1-201ENST00000439120 ZHX1-C8orf76Q96EF9 292 aa16.39■□□□□ 0.21
AC004540.1-201ENST00000439120 PANX1Q96RD7 426 aa16.39■□□□□ 0.21
AC004540.1-201ENST00000439120 ZBTB18Q99592 522 aa16.39■□□□□ 0.21
AC004540.1-201ENST00000439120 PSD2Q9BQI7 771 aa16.39■□□□□ 0.21
AC004540.1-201ENST00000439120 GSX2Q9BZM3 304 aa16.39■□□□□ 0.21
AC004540.1-201ENST00000439120 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.39■□□□□ 0.21
AC004540.1-201ENST00000439120 ACER3Q9NUN7 267 aa16.39■□□□□ 0.21
AC004540.1-201ENST00000439120 RNF115Q9Y4L5 304 aa16.39■□□□□ 0.21
AC004540.1-201ENST00000439120 NIPBLQ6KC79 2804 aaeCLIP16.38■□□□□ 0.21
AC004540.1-201ENST00000439120 C9JVG2 144 aa16.38■□□□□ 0.21
AC004540.1-201ENST00000439120 ANKRD28O15084 1053 aa16.38■□□□□ 0.21
AC004540.1-201ENST00000439120 SMAD7O15105 426 aaKnown RBP16.38■□□□□ 0.21
AC004540.1-201ENST00000439120 SMAD9O15198 467 aaKnown RBP16.38■□□□□ 0.21
AC004540.1-201ENST00000439120 CLOCKO15516 846 aa16.38■□□□□ 0.21
AC004540.1-201ENST00000439120 DNAJA2O60884 412 aa16.38■□□□□ 0.21
AC004540.1-201ENST00000439120 FESP07332 822 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms