RNA–Protein interactions for RNA: ENST00000439106.5

PRAME-209, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 891 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-209ENST00000439106 ADH6P28332 368 aa12.35□□□□□ -0.43
PRAME-209ENST00000439106 PGM1P36871 562 aa12.35□□□□□ -0.43
PRAME-209ENST00000439106 SESN3P58005 492 aa12.35□□□□□ -0.43
PRAME-209ENST00000439106 HPCAP84074 193 aa12.35□□□□□ -0.43
PRAME-209ENST00000439106 SELENBP1Q13228 472 aa12.35□□□□□ -0.43
PRAME-209ENST00000439106 PDCD4Q53EL6 469 aaKnown RBP12.35□□□□□ -0.43
PRAME-209ENST00000439106 SLC25A53Q5H9E4 307 aa12.35□□□□□ -0.43
PRAME-209ENST00000439106 SPNS3Q6ZMD2 512 aa12.35□□□□□ -0.43
PRAME-209ENST00000439106 NUFIP2Q7Z417 695 aaKnown RBP12.35□□□□□ -0.43
PRAME-209ENST00000439106 TUSC5Q8IXB3 177 aa12.35□□□□□ -0.43
PRAME-209ENST00000439106 FAM71CQ8NEG0 241 aa12.35□□□□□ -0.43
PRAME-209ENST00000439106 RNF128Q8TEB7 428 aa12.35□□□□□ -0.43
PRAME-209ENST00000439106 NINJ1Q92982 152 aa12.35□□□□□ -0.43
PRAME-209ENST00000439106 CPNE4Q96A23 557 aaPredicted RBP12.35□□□□□ -0.43
PRAME-209ENST00000439106 PIK3IP1Q96FE7 263 aa12.35□□□□□ -0.43
PRAME-209ENST00000439106 AURKBQ96GD4 344 aaPredicted RBP12.35□□□□□ -0.43
PRAME-209ENST00000439106 SLC38A1Q9H2H9 487 aa12.35□□□□□ -0.43
PRAME-209ENST00000439106 SLCO1B3Q9NPD5 702 aa12.35□□□□□ -0.43
PRAME-209ENST00000439106 PAQR5Q9NXK6 330 aaPredicted RBP12.35□□□□□ -0.43
PRAME-209ENST00000439106 NDRG3Q9UGV2 375 aa12.35□□□□□ -0.43
PRAME-209ENST00000439106 USH1CQ9Y6N9 552 aa12.35□□□□□ -0.43
PRAME-209ENST00000439106 DEFB108AA8MXU0 73 aa12.34□□□□□ -0.43
PRAME-209ENST00000439106 SLCO1B7G3V0H7 640 aa12.34□□□□□ -0.43
PRAME-209ENST00000439106 C16orf97H3BN30 126 aa12.34□□□□□ -0.43
PRAME-209ENST00000439106 AP3D1O14617 1153 aa12.34□□□□□ -0.43
PRAME-209ENST00000439106 KLF11O14901 512 aa12.34□□□□□ -0.43
PRAME-209ENST00000439106 SLC22A3O75751 556 aa12.34□□□□□ -0.43
PRAME-209ENST00000439106 AGR2O95994 175 aa12.34□□□□□ -0.43
PRAME-209ENST00000439106 IDO1P14902 403 aa12.34□□□□□ -0.43
PRAME-209ENST00000439106 DNASE1P24855 282 aa12.34□□□□□ -0.43
PRAME-209ENST00000439106 SLC7A1P30825 629 aa12.34□□□□□ -0.43
PRAME-209ENST00000439106 MERTKQ12866 999 aa12.34□□□□□ -0.43
PRAME-209ENST00000439106 TSC22D1Q15714 1073 aa12.34□□□□□ -0.43
PRAME-209ENST00000439106 C3orf33Q6P1S2 294 aa12.34□□□□□ -0.43
PRAME-209ENST00000439106 EIF3MQ7L2H7 374 aaKnown RBP12.34□□□□□ -0.43
PRAME-209ENST00000439106 FCRLAQ7L513 359 aa12.34□□□□□ -0.43
PRAME-209ENST00000439106 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.34□□□□□ -0.43
PRAME-209ENST00000439106 TRIML2Q8N7C3 387 aa12.34□□□□□ -0.43
PRAME-209ENST00000439106 CNOT9Q92600 299 aaKnown RBP12.34□□□□□ -0.43
PRAME-209ENST00000439106 VPS33AQ96AX1 596 aa12.34□□□□□ -0.43
PRAME-209ENST00000439106 ATP6V1G3Q96LB4 118 aa12.34□□□□□ -0.43
PRAME-209ENST00000439106 HS3ST6Q96QI5 342 aa12.34□□□□□ -0.43
PRAME-209ENST00000439106 OR5B2Q96R09 309 aa12.34□□□□□ -0.43
PRAME-209ENST00000439106 EBF4Q9BQW3 602 aa12.34□□□□□ -0.43
PRAME-209ENST00000439106 SLC39A3Q9BRY0 314 aa12.34□□□□□ -0.43
PRAME-209ENST00000439106 SAP130Q9H0E3 1048 aa12.34□□□□□ -0.43
PRAME-209ENST00000439106 PLSCR4Q9NRQ2 329 aa12.34□□□□□ -0.43
PRAME-209ENST00000439106 ELOVL5Q9NYP7 299 aa12.34□□□□□ -0.43
PRAME-209ENST00000439106 ETV2O00321 342 aaPredicted RBP12.33□□□□□ -0.44
PRAME-209ENST00000439106 RFXANKO14593 260 aa12.33□□□□□ -0.44
PRAME-209ENST00000439106 UBDO15205 165 aa12.33□□□□□ -0.44
PRAME-209ENST00000439106 DNAJA2O60884 412 aa12.33□□□□□ -0.44
PRAME-209ENST00000439106 ATE1O95260 518 aa12.33□□□□□ -0.44
PRAME-209ENST00000439106 RAF1P04049 648 aa12.33□□□□□ -0.44
PRAME-209ENST00000439106 THBDP07204 575 aa12.33□□□□□ -0.44
PRAME-209ENST00000439106 PGCP20142 388 aa12.33□□□□□ -0.44
PRAME-209ENST00000439106 CCNA2P20248 432 aa12.33□□□□□ -0.44
PRAME-209ENST00000439106 CRYGSP22914 178 aa12.33□□□□□ -0.44
PRAME-209ENST00000439106 EDNRAP25101 427 aa12.33□□□□□ -0.44
PRAME-209ENST00000439106 MVDP53602 400 aa12.33□□□□□ -0.44
PRAME-209ENST00000439106 KCNJ10P78508 379 aa12.33□□□□□ -0.44
PRAME-209ENST00000439106 MAPK11Q15759 364 aa12.33□□□□□ -0.44
PRAME-209ENST00000439106 EPGNQ6UW88 154 aa12.33□□□□□ -0.44
PRAME-209ENST00000439106 STAC2Q6ZMT1 411 aa12.33□□□□□ -0.44
PRAME-209ENST00000439106 PLEKHM3Q6ZWE6 761 aa12.33□□□□□ -0.44
PRAME-209ENST00000439106 GLB1L3Q8NCI6 653 aaPredicted RBP12.33□□□□□ -0.44
PRAME-209ENST00000439106 ZNF563Q8TA94 476 aa12.33□□□□□ -0.44
PRAME-209ENST00000439106 ZNF775Q96BV0 537 aaPredicted RBP12.33□□□□□ -0.44
PRAME-209ENST00000439106 REXO5Q96IC2 774 aaKnown RBP12.33□□□□□ -0.44
PRAME-209ENST00000439106 ZNF300Q96RE9 604 aaPredicted RBP12.33□□□□□ -0.44
PRAME-209ENST00000439106 FOXC2Q99958 501 aa12.33□□□□□ -0.44
PRAME-209ENST00000439106 HEATR1Q9H583 2144 aaKnown RBP12.33□□□□□ -0.44
PRAME-209ENST00000439106 CTPS2Q9NRF8 586 aa12.33□□□□□ -0.44
PRAME-209ENST00000439106 POLE3Q9NRF9 147 aa12.33□□□□□ -0.44
PRAME-209ENST00000439106 SDR39U1Q9NRG7 319 aaPredicted RBP12.33□□□□□ -0.44
PRAME-209ENST00000439106 USF3Q68DE3 2245 aa12.33□□□□□ -0.44
PRAME-209ENST00000439106 GJE1A6NN92 205 aa12.32□□□□□ -0.44
PRAME-209ENST00000439106 SMAD9O15198 467 aaKnown RBP12.32□□□□□ -0.44
PRAME-209ENST00000439106 ANP32DO95626 131 aa12.32□□□□□ -0.44
PRAME-209ENST00000439106 IL6P05231 212 aa12.32□□□□□ -0.44
PRAME-209ENST00000439106 ETFAP13804 333 aa12.32□□□□□ -0.44
PRAME-209ENST00000439106 CD1EP15812 388 aa12.32□□□□□ -0.44
PRAME-209ENST00000439106 POLR2JP52435 117 aaKnown RBP12.32□□□□□ -0.44
PRAME-209ENST00000439106 KEAP1Q14145 624 aa12.32□□□□□ -0.44
PRAME-209ENST00000439106 GSTA3Q16772 222 aa12.32□□□□□ -0.44
PRAME-209ENST00000439106 RPS26P11Q5JNZ5 115 aaPredicted RBP12.32□□□□□ -0.44
PRAME-209ENST00000439106 C6orf10Q5SRN2 563 aa12.32□□□□□ -0.44
PRAME-209ENST00000439106 ALKBH2Q6NS38 261 aa12.32□□□□□ -0.44
PRAME-209ENST00000439106 SLC2A7Q6PXP3 512 aa12.32□□□□□ -0.44
PRAME-209ENST00000439106 LRRC8CQ8TDW0 803 aa12.32□□□□□ -0.44
PRAME-209ENST00000439106 ST8SIA1Q92185 356 aa12.32□□□□□ -0.44
PRAME-209ENST00000439106 ARL5BQ96KC2 179 aa12.32□□□□□ -0.44
PRAME-209ENST00000439106 C7orf26Q96N11 449 aa12.32□□□□□ -0.44
PRAME-209ENST00000439106 PSD2Q9BQI7 771 aa12.32□□□□□ -0.44
PRAME-209ENST00000439106 OR11A1Q9GZK7 315 aa12.32□□□□□ -0.44
PRAME-209ENST00000439106 CXXC4Q9H2H0 198 aa12.32□□□□□ -0.44
PRAME-209ENST00000439106 GLRX2Q9NS18 164 aa12.32□□□□□ -0.44
PRAME-209ENST00000439106 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.32□□□□□ -0.44
PRAME-209ENST00000439106 ACER3Q9NUN7 267 aa12.32□□□□□ -0.44
PRAME-209ENST00000439106 ZNF226Q9NYT6 803 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms