RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 TLCD2A6NGC4 264 aa12.83□□□□□ -0.36
PTCHD3-201ENST00000438700 CYR61O00622 381 aa12.83□□□□□ -0.36
PTCHD3-201ENST00000438700 OR5F1O95221 314 aa12.83□□□□□ -0.36
PTCHD3-201ENST00000438700 LIMS3P0CW19 117 aa12.83□□□□□ -0.36
PTCHD3-201ENST00000438700 LIMS4P0CW20 117 aa12.83□□□□□ -0.36
PTCHD3-201ENST00000438700 ATXN8OSP0DMR3 200 aa12.83□□□□□ -0.36
PTCHD3-201ENST00000438700 HTR2AP28223 471 aa12.83□□□□□ -0.36
PTCHD3-201ENST00000438700 RPS5P46782 204 aaKnown RBP12.83□□□□□ -0.36
PTCHD3-201ENST00000438700 GCGRP47871 477 aa12.83□□□□□ -0.36
PTCHD3-201ENST00000438700 OR1D5P58170 312 aa12.83□□□□□ -0.36
PTCHD3-201ENST00000438700 DUSP8Q13202 625 aa12.83□□□□□ -0.36
PTCHD3-201ENST00000438700 SLC35F1Q5T1Q4 408 aa12.83□□□□□ -0.36
PTCHD3-201ENST00000438700 FHL5Q5TD97 284 aa12.83□□□□□ -0.36
PTCHD3-201ENST00000438700 ZC3H14Q6PJT7 736 aaKnown RBP12.83□□□□□ -0.36
PTCHD3-201ENST00000438700 SMARCD3Q6STE5 483 aa12.83□□□□□ -0.36
PTCHD3-201ENST00000438700 GDPGP1Q6ZNW5 385 aa12.83□□□□□ -0.36
PTCHD3-201ENST00000438700 POGLUT1Q8NBL1 392 aa12.83□□□□□ -0.36
PTCHD3-201ENST00000438700 PFN4Q8NHR9 129 aa12.83□□□□□ -0.36
PTCHD3-201ENST00000438700 PIGUQ9H490 435 aa12.83□□□□□ -0.36
PTCHD3-201ENST00000438700 PRMT8Q9NR22 394 aaPredicted RBP12.83□□□□□ -0.36
PTCHD3-201ENST00000438700 PLEKHB1Q9UF11 243 aaPredicted RBP12.83□□□□□ -0.36
PTCHD3-201ENST00000438700 ZDBF2Q9HCK1 2354 aa12.83□□□□□ -0.36
PTCHD3-201ENST00000438700 TNRC6BQ9UPQ9 1833 aaKnown RBP12.83□□□□□ -0.36
PTCHD3-201ENST00000438700 A0A0A6YYC8 382 aaPredicted RBP12.83□□□□□ -0.36
PTCHD3-201ENST00000438700 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.83□□□□□ -0.36
PTCHD3-201ENST00000438700 KDM4EB2RXH2 506 aaPredicted RBP12.83□□□□□ -0.36
PTCHD3-201ENST00000438700 I3L1I5 382 aaPredicted RBP12.83□□□□□ -0.36
PTCHD3-201ENST00000438700 STX11O75558 287 aa12.83□□□□□ -0.36
PTCHD3-201ENST00000438700 TDGF1P13385 188 aa12.83□□□□□ -0.36
PTCHD3-201ENST00000438700 EPHA4P54764 986 aa12.83□□□□□ -0.36
PTCHD3-201ENST00000438700 RUNX1T1Q06455 604 aa12.83□□□□□ -0.36
PTCHD3-201ENST00000438700 SHBQ15464 509 aa12.83□□□□□ -0.36
PTCHD3-201ENST00000438700 TATDN3Q17R31 274 aa12.83□□□□□ -0.36
PTCHD3-201ENST00000438700 PGGHGQ32M88 737 aa12.83□□□□□ -0.36
PTCHD3-201ENST00000438700 PYDC2Q56P42 97 aa12.83□□□□□ -0.36
PTCHD3-201ENST00000438700 PMS2CLQ68D20 193 aa12.83□□□□□ -0.36
PTCHD3-201ENST00000438700 ZNF619Q8N2I2 560 aa12.83□□□□□ -0.36
PTCHD3-201ENST00000438700 ZNF614Q8N883 585 aa12.83□□□□□ -0.36
PTCHD3-201ENST00000438700 ATP6V1C2Q8NEY4 427 aa12.83□□□□□ -0.36
PTCHD3-201ENST00000438700 DEDD2Q8WXF8 326 aa12.83□□□□□ -0.36
PTCHD3-201ENST00000438700 NACC2Q96BF6 587 aa12.83□□□□□ -0.36
PTCHD3-201ENST00000438700 AHCYL2Q96HN2 611 aaKnown RBP12.83□□□□□ -0.36
PTCHD3-201ENST00000438700 MAP6Q96JE9 813 aa12.83□□□□□ -0.36
PTCHD3-201ENST00000438700 NECAB3Q96P71 396 aaPredicted RBP12.83□□□□□ -0.36
PTCHD3-201ENST00000438700 ELF4Q99607 663 aaPredicted RBP12.83□□□□□ -0.36
PTCHD3-201ENST00000438700 FGF20Q9NP95 211 aaPredicted RBP12.83□□□□□ -0.36
PTCHD3-201ENST00000438700 ATP13A2Q9NQ11 1180 aa12.83□□□□□ -0.36
PTCHD3-201ENST00000438700 PRDM9Q9NQV7 894 aa12.83□□□□□ -0.36
PTCHD3-201ENST00000438700 C20orf141Q9NUB4 165 aa12.83□□□□□ -0.36
PTCHD3-201ENST00000438700 TECTAO75443 2155 aa12.82□□□□□ -0.36
PTCHD3-201ENST00000438700 LOC105371267A0A1B0GV96 52 aa12.82□□□□□ -0.36
PTCHD3-201ENST00000438700 GXYLT2A0PJZ3 443 aa12.82□□□□□ -0.36
PTCHD3-201ENST00000438700 KLF4O43474 513 aa12.82□□□□□ -0.36
PTCHD3-201ENST00000438700 SRPX2O60687 465 aaPredicted RBP12.82□□□□□ -0.36
PTCHD3-201ENST00000438700 LALBAP00709 142 aa12.82□□□□□ -0.36
PTCHD3-201ENST00000438700 ATP1B1P05026 303 aa12.82□□□□□ -0.36
PTCHD3-201ENST00000438700 GIMD1P0DJR0 217 aa12.82□□□□□ -0.36
PTCHD3-201ENST00000438700 ATP6V1E1P36543 226 aa12.82□□□□□ -0.36
PTCHD3-201ENST00000438700 STAT5AP42229 794 aa12.82□□□□□ -0.36
PTCHD3-201ENST00000438700 OR3A3P47888 321 aa12.82□□□□□ -0.36
PTCHD3-201ENST00000438700 RAB25P57735 213 aa12.82□□□□□ -0.36
PTCHD3-201ENST00000438700 SIGLEC14Q08ET2 396 aa12.82□□□□□ -0.36
PTCHD3-201ENST00000438700 ASAH1Q13510 395 aa12.82□□□□□ -0.36
PTCHD3-201ENST00000438700 CRTC2Q53ET0 693 aaPredicted RBP12.82□□□□□ -0.36
PTCHD3-201ENST00000438700 EIPR1Q53HC9 387 aa12.82□□□□□ -0.36
PTCHD3-201ENST00000438700 PDZK1Q5T2W1 519 aa12.82□□□□□ -0.36
PTCHD3-201ENST00000438700 ZAR1Q86SH2 424 aa12.82□□□□□ -0.36
PTCHD3-201ENST00000438700 RANBP3LQ86VV4 465 aaPredicted RBP12.82□□□□□ -0.36
PTCHD3-201ENST00000438700 WDR5BQ86VZ2 330 aa12.82□□□□□ -0.36
PTCHD3-201ENST00000438700 OR2T33Q8NG76 320 aa12.82□□□□□ -0.36
PTCHD3-201ENST00000438700 ZDHHC12Q96GR4 267 aa12.82□□□□□ -0.36
PTCHD3-201ENST00000438700 MED30Q96HR3 178 aa12.82□□□□□ -0.36
PTCHD3-201ENST00000438700 UNC13CQ8NB66 2214 aa12.82□□□□□ -0.36
PTCHD3-201ENST00000438700 TMEM129A0AVI4 362 aa12.82□□□□□ -0.36
PTCHD3-201ENST00000438700 FAM25AB3EWG3 89 aa12.82□□□□□ -0.36
PTCHD3-201ENST00000438700 FAM25CB3EWG5 89 aa12.82□□□□□ -0.36
PTCHD3-201ENST00000438700 FAM25GB3EWG6 89 aa12.82□□□□□ -0.36
PTCHD3-201ENST00000438700 SOCS6O14544 535 aa12.82□□□□□ -0.36
PTCHD3-201ENST00000438700 NUDT21O43809 227 aaKnown RBP12.82□□□□□ -0.36
PTCHD3-201ENST00000438700 GPR75O95800 540 aa12.82□□□□□ -0.36
PTCHD3-201ENST00000438700 PSKH1P11801 424 aa12.82□□□□□ -0.36
PTCHD3-201ENST00000438700 SDC2P34741 201 aa12.82□□□□□ -0.36
PTCHD3-201ENST00000438700 GABRA3P34903 492 aa12.82□□□□□ -0.36
PTCHD3-201ENST00000438700 SLC1A3P43003 542 aa12.82□□□□□ -0.36
PTCHD3-201ENST00000438700 GABRA4P48169 554 aa12.82□□□□□ -0.36
PTCHD3-201ENST00000438700 ARRB1P49407 418 aaPredicted RBP12.82□□□□□ -0.36
PTCHD3-201ENST00000438700 RAB38P57729 211 aa12.82□□□□□ -0.36
PTCHD3-201ENST00000438700 PRICKLE4Q2TBC4 344 aa12.82□□□□□ -0.36
PTCHD3-201ENST00000438700 ZNF791Q3KP31 576 aaPredicted RBP12.82□□□□□ -0.36
PTCHD3-201ENST00000438700 AMZ1Q400G9 498 aa12.82□□□□□ -0.36
PTCHD3-201ENST00000438700 DGAT2L6Q6ZPD8 337 aa12.82□□□□□ -0.36
PTCHD3-201ENST00000438700 GRPEL2Q8TAA5 225 aa12.82□□□□□ -0.36
PTCHD3-201ENST00000438700 PRSS27Q9BQR3 290 aa12.82□□□□□ -0.36
PTCHD3-201ENST00000438700 ENKD1Q9H0I2 346 aa12.82□□□□□ -0.36
PTCHD3-201ENST00000438700 PDE7BQ9NP56 450 aa12.82□□□□□ -0.36
PTCHD3-201ENST00000438700 HINT3Q9NQE9 182 aaKnown RBP12.82□□□□□ -0.36
PTCHD3-201ENST00000438700 MRPS18AQ9NVS2 196 aaKnown RBP12.82□□□□□ -0.36
PTCHD3-201ENST00000438700 NLGN3Q9NZ94 848 aa12.82□□□□□ -0.36
PTCHD3-201ENST00000438700 MAT2BQ9NZL9 334 aa12.82□□□□□ -0.36
PTCHD3-201ENST00000438700 HCN3Q9P1Z3 774 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms