RNA–Protein interactions for RNA: ENST00000438508.1

HMGN1P6-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 6, humanhuman

BASIC

Gene HMGN1P6, Length 291 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P6-201ENST00000438508 WDR36Q8NI36 951 aaKnown RBP6.53□□□□□ -1.36
HMGN1P6-201ENST00000438508 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.53□□□□□ -1.36
HMGN1P6-201ENST00000438508 DAZLQ92904 295 aaKnown RBP6.53□□□□□ -1.36
HMGN1P6-201ENST00000438508 MYDGFQ969H8 173 aa6.53□□□□□ -1.36
HMGN1P6-201ENST00000438508 MUL1Q969V5 352 aa6.53□□□□□ -1.36
HMGN1P6-201ENST00000438508 SLC41A3Q96GZ6 507 aa6.53□□□□□ -1.36
HMGN1P6-201ENST00000438508 MPP4Q96JB8 637 aa6.53□□□□□ -1.36
HMGN1P6-201ENST00000438508 Q96MT0 163 aa6.53□□□□□ -1.36
HMGN1P6-201ENST00000438508 CCNL2Q96S94 520 aaPredicted RBP6.53□□□□□ -1.36
HMGN1P6-201ENST00000438508 MYCBPQ99417 103 aaPredicted RBP6.53□□□□□ -1.36
HMGN1P6-201ENST00000438508 GPA33Q99795 319 aa6.53□□□□□ -1.36
HMGN1P6-201ENST00000438508 BCL7BQ9BQE9 202 aa6.53□□□□□ -1.36
HMGN1P6-201ENST00000438508 ZNF426Q9BUY5 554 aa6.53□□□□□ -1.36
HMGN1P6-201ENST00000438508 POLDIP3Q9BY77 421 aaKnown RBP6.53□□□□□ -1.36
HMGN1P6-201ENST00000438508 KRTAP3-1Q9BYR8 98 aa6.53□□□□□ -1.36
HMGN1P6-201ENST00000438508 TRIM2Q9C040 744 aa6.53□□□□□ -1.36
HMGN1P6-201ENST00000438508 SEMA4CQ9C0C4 833 aa6.53□□□□□ -1.36
HMGN1P6-201ENST00000438508 SLC26A1Q9H2B4 701 aa6.53□□□□□ -1.36
HMGN1P6-201ENST00000438508 POLR1BQ9H9Y6 1135 aa6.53□□□□□ -1.36
HMGN1P6-201ENST00000438508 TMEM27Q9HBJ8 222 aa6.53□□□□□ -1.36
HMGN1P6-201ENST00000438508 C14orf105Q9NVL8 296 aa6.53□□□□□ -1.36
HMGN1P6-201ENST00000438508 MRPS18AQ9NVS2 196 aaKnown RBP6.53□□□□□ -1.36
HMGN1P6-201ENST00000438508 PAK1IP1Q9NWT1 392 aaPredicted RBP6.53□□□□□ -1.36
HMGN1P6-201ENST00000438508 CNOT2Q9NZN8 540 aaKnown RBP6.53□□□□□ -1.36
HMGN1P6-201ENST00000438508 ERVK-18Q9QC07 812 aa6.53□□□□□ -1.36
HMGN1P6-201ENST00000438508 TESQ9UGI8 421 aaKnown RBP6.53□□□□□ -1.36
HMGN1P6-201ENST00000438508 RSL24D1Q9UHA3 163 aaKnown RBP6.53□□□□□ -1.36
HMGN1P6-201ENST00000438508 DUSP13Q9UII6 198 aa6.53□□□□□ -1.36
HMGN1P6-201ENST00000438508 ZNF223Q9UK11 482 aaPredicted RBP6.53□□□□□ -1.36
HMGN1P6-201ENST00000438508 MRTO4Q9UKD2 239 aaKnown RBP6.53□□□□□ -1.36
HMGN1P6-201ENST00000438508 RARRES3Q9UL19 164 aa6.53□□□□□ -1.36
HMGN1P6-201ENST00000438508 ERVK-19Q9WJR5 959 aa6.53□□□□□ -1.36
HMGN1P6-201ENST00000438508 DTX4Q9Y2E6 619 aa6.53□□□□□ -1.36
HMGN1P6-201ENST00000438508 SNX5Q9Y5X3 404 aa6.53□□□□□ -1.36
HMGN1P6-201ENST00000438508 CLCA3PQ9Y6N3 262 aa6.53□□□□□ -1.36
HMGN1P6-201ENST00000438508 EYSQ5T1H1 3165 aa6.53□□□□□ -1.36
HMGN1P6-201ENST00000438508 EXPH5Q8NEV8 1989 aa6.53□□□□□ -1.36
HMGN1P6-201ENST00000438508 COL27A1Q8IZC6 1860 aaPredicted RBP6.52□□□□□ -1.37
HMGN1P6-201ENST00000438508 KNTC1P50748 2209 aa6.52□□□□□ -1.37
HMGN1P6-201ENST00000438508 A0A0B4J2E0 115 aa6.52□□□□□ -1.37
HMGN1P6-201ENST00000438508 CENPVL1A0A0U1RR11 272 aa6.52□□□□□ -1.37
HMGN1P6-201ENST00000438508 A0A1B0GX12 115 aa6.52□□□□□ -1.37
HMGN1P6-201ENST00000438508 FRG2CA6NGY1 282 aa6.52□□□□□ -1.37
HMGN1P6-201ENST00000438508 SERINC4A6NH21 518 aa6.52□□□□□ -1.37
HMGN1P6-201ENST00000438508 CLDN24A6NM45 220 aa6.52□□□□□ -1.37
HMGN1P6-201ENST00000438508 CPSF4LA6NMK7 179 aaKnown RBP6.52□□□□□ -1.37
HMGN1P6-201ENST00000438508 NOTOA8MTQ0 251 aa6.52□□□□□ -1.37
HMGN1P6-201ENST00000438508 ZNF99A8MXY4 864 aaPredicted RBP6.52□□□□□ -1.37
HMGN1P6-201ENST00000438508 PATE3B3GLJ2 98 aa6.52□□□□□ -1.37
HMGN1P6-201ENST00000438508 FRS3O43559 492 aa6.52□□□□□ -1.37
HMGN1P6-201ENST00000438508 PTP4A3O75365 173 aa6.52□□□□□ -1.37
HMGN1P6-201ENST00000438508 TRMUO75648 421 aaKnown RBP6.52□□□□□ -1.37
HMGN1P6-201ENST00000438508 CDC123O75794 336 aaPredicted RBP6.52□□□□□ -1.37
HMGN1P6-201ENST00000438508 IGF2P01344 180 aa6.52□□□□□ -1.37
HMGN1P6-201ENST00000438508 CDK1P06493 297 aa6.52□□□□□ -1.37
HMGN1P6-201ENST00000438508 NGFRP08138 427 aa6.52□□□□□ -1.37
HMGN1P6-201ENST00000438508 PIPP12273 146 aaPredicted RBP6.52□□□□□ -1.37
HMGN1P6-201ENST00000438508 ENDOUP21128 410 aaKnown RBP6.52□□□□□ -1.37
HMGN1P6-201ENST00000438508 TBXA2RP21731 343 aa6.52□□□□□ -1.37
HMGN1P6-201ENST00000438508 ACP1P24666 158 aa6.52□□□□□ -1.37
HMGN1P6-201ENST00000438508 HTR2AP28223 471 aa6.52□□□□□ -1.37
HMGN1P6-201ENST00000438508 RBM34P42696 430 aaKnown RBP6.52□□□□□ -1.37
HMGN1P6-201ENST00000438508 EFNA3P52797 238 aa6.52□□□□□ -1.37
HMGN1P6-201ENST00000438508 PNLIPRP2P54317 469 aa6.52□□□□□ -1.37
HMGN1P6-201ENST00000438508 CTBP2P56545 445 aa6.52□□□□□ -1.37
HMGN1P6-201ENST00000438508 DCDP81605 110 aaKnown RBP6.52□□□□□ -1.37
HMGN1P6-201ENST00000438508 LSAMPQ13449 338 aa6.52□□□□□ -1.37
HMGN1P6-201ENST00000438508 IRF3Q14653 427 aa6.52□□□□□ -1.37
HMGN1P6-201ENST00000438508 GINS1Q14691 196 aa6.52□□□□□ -1.37
HMGN1P6-201ENST00000438508 NSDHLQ15738 373 aa6.52□□□□□ -1.37
HMGN1P6-201ENST00000438508 SMN1Q16637 294 aaKnown RBP6.52□□□□□ -1.37
HMGN1P6-201ENST00000438508 FLYWCH1Q4VC44 716 aa6.52□□□□□ -1.37
HMGN1P6-201ENST00000438508 FNDC7Q5VTL7 733 aa6.52□□□□□ -1.37
HMGN1P6-201ENST00000438508 MEDAGQ5VYS4 303 aa6.52□□□□□ -1.37
HMGN1P6-201ENST00000438508 ACSM5Q6NUN0 579 aa6.52□□□□□ -1.37
HMGN1P6-201ENST00000438508 ZNF730Q6ZMV8 503 aa6.52□□□□□ -1.37
HMGN1P6-201ENST00000438508 PTCHD4Q6ZW05 846 aa6.52□□□□□ -1.37
HMGN1P6-201ENST00000438508 OVCH1Q7RTY7 1134 aa6.52□□□□□ -1.37
HMGN1P6-201ENST00000438508 HMGN2P46Q86SG4 172 aa6.52□□□□□ -1.37
HMGN1P6-201ENST00000438508 ERI1Q8IV48 349 aaKnown RBP6.52□□□□□ -1.37
HMGN1P6-201ENST00000438508 SLC43A2Q8N370 569 aa6.52□□□□□ -1.37
HMGN1P6-201ENST00000438508 METTL27Q8N6F8 245 aaPredicted RBP6.52□□□□□ -1.37
HMGN1P6-201ENST00000438508 POGLUT1Q8NBL1 392 aa6.52□□□□□ -1.37
HMGN1P6-201ENST00000438508 SLC38A9Q8NBW4 561 aa6.52□□□□□ -1.37
HMGN1P6-201ENST00000438508 FAM71CQ8NEG0 241 aa6.52□□□□□ -1.37
HMGN1P6-201ENST00000438508 NFAM1Q8NET5 270 aaPredicted RBP6.52□□□□□ -1.37
HMGN1P6-201ENST00000438508 OR1N1Q8NGS0 311 aa6.52□□□□□ -1.37
HMGN1P6-201ENST00000438508 OR4C3Q8NH37 302 aa6.52□□□□□ -1.37
HMGN1P6-201ENST00000438508 PIGXQ8TBF5 258 aa6.52□□□□□ -1.37
HMGN1P6-201ENST00000438508 FAM81AQ8TBF8 368 aa6.52□□□□□ -1.37
HMGN1P6-201ENST00000438508 IFI44Q8TCB0 444 aa6.52□□□□□ -1.37
HMGN1P6-201ENST00000438508 STT3BQ8TCJ2 826 aa6.52□□□□□ -1.37
HMGN1P6-201ENST00000438508 SLC2A12Q8TD20 617 aa6.52□□□□□ -1.37
HMGN1P6-201ENST00000438508 FAR1Q8WVX9 515 aa6.52□□□□□ -1.37
HMGN1P6-201ENST00000438508 CNOT9Q92600 299 aaKnown RBP6.52□□□□□ -1.37
HMGN1P6-201ENST00000438508 SGCDQ92629 289 aa6.52□□□□□ -1.37
HMGN1P6-201ENST00000438508 OSTF1Q92882 214 aa6.52□□□□□ -1.37
HMGN1P6-201ENST00000438508 HSPBAP1Q96EW2 488 aa6.52□□□□□ -1.37
HMGN1P6-201ENST00000438508 LCORQ96JN0 433 aaPredicted RBP6.52□□□□□ -1.37
HMGN1P6-201ENST00000438508 LRFN5Q96NI6 719 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms