RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 ZFP90Q8TF47 636 aa6.91□□□□□ -1.3
VPS50-204ENST00000438395 OR5P2Q8WZ92 322 aa6.91□□□□□ -1.3
VPS50-204ENST00000438395 HSD17B8Q92506 261 aa6.91□□□□□ -1.3
VPS50-204ENST00000438395 HOXB13Q92826 284 aaPredicted RBP6.91□□□□□ -1.3
VPS50-204ENST00000438395 ZHX1-C8orf76Q96EF9 292 aa6.91□□□□□ -1.3
VPS50-204ENST00000438395 C16orf58Q96GQ5 468 aa6.91□□□□□ -1.3
VPS50-204ENST00000438395 APOPT1Q96IL0 206 aa6.91□□□□□ -1.3
VPS50-204ENST00000438395 ADGRG7Q96K78 797 aa6.91□□□□□ -1.3
VPS50-204ENST00000438395 FCRL1Q96LA6 429 aa6.91□□□□□ -1.3
VPS50-204ENST00000438395 MRGPRX4Q96LA9 322 aa6.91□□□□□ -1.3
VPS50-204ENST00000438395 C1orf50Q9BV19 199 aa6.91□□□□□ -1.3
VPS50-204ENST00000438395 GATA5Q9BWX5 397 aaPredicted RBP6.91□□□□□ -1.3
VPS50-204ENST00000438395 C12orf65Q9H3J6 166 aaKnown RBP6.91□□□□□ -1.3
VPS50-204ENST00000438395 PIGUQ9H490 435 aa6.91□□□□□ -1.3
VPS50-204ENST00000438395 L2HGDHQ9H9P8 463 aa6.91□□□□□ -1.3
VPS50-204ENST00000438395 BARX1Q9HBU1 254 aaPredicted RBP6.91□□□□□ -1.3
VPS50-204ENST00000438395 SERINC1Q9NRX5 453 aa6.91□□□□□ -1.3
VPS50-204ENST00000438395 ZNF701Q9NV72 531 aaPredicted RBP6.91□□□□□ -1.3
VPS50-204ENST00000438395 FBXO34Q9NWN3 711 aa6.91□□□□□ -1.3
VPS50-204ENST00000438395 EMC3Q9P0I2 261 aa6.91□□□□□ -1.3
VPS50-204ENST00000438395 TRAF6Q9Y4K3 522 aa6.91□□□□□ -1.3
VPS50-204ENST00000438395 DNAJC15Q9Y5T4 150 aa6.91□□□□□ -1.3
VPS50-204ENST00000438395 ACTL7BQ9Y614 415 aa6.91□□□□□ -1.3
VPS50-204ENST00000438395 SPIN1Q9Y657 262 aaPredicted RBP6.91□□□□□ -1.3
VPS50-204ENST00000438395 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.9□□□□□ -1.3
VPS50-204ENST00000438395 NPIPA5A0A0B4J1W7 369 aa6.9□□□□□ -1.3
VPS50-204ENST00000438395 DUXAA6NLW8 204 aa6.9□□□□□ -1.3
VPS50-204ENST00000438395 TMEM233B4DJY2 109 aa6.9□□□□□ -1.3
VPS50-204ENST00000438395 NPIPA7E9PJI5 369 aa6.9□□□□□ -1.3
VPS50-204ENST00000438395 ZNF264O43296 627 aa6.9□□□□□ -1.3
VPS50-204ENST00000438395 NPHS1O60500 1241 aa6.9□□□□□ -1.3
VPS50-204ENST00000438395 SKAP2O75563 359 aaPredicted RBP6.9□□□□□ -1.3
VPS50-204ENST00000438395 C6orf47O95873 294 aa6.9□□□□□ -1.3
VPS50-204ENST00000438395 AK1P00568 194 aa6.9□□□□□ -1.3
VPS50-204ENST00000438395 PLAUP00749 431 aa6.9□□□□□ -1.3
VPS50-204ENST00000438395 SHBGP04278 402 aa6.9□□□□□ -1.3
VPS50-204ENST00000438395 YES1P07947 543 aa6.9□□□□□ -1.3
VPS50-204ENST00000438395 LINGO3P0C6S8 592 aa6.9□□□□□ -1.3
VPS50-204ENST00000438395 NPIPA8P0DM63 369 aa6.9□□□□□ -1.3
VPS50-204ENST00000438395 TFPIP10646 304 aa6.9□□□□□ -1.3
VPS50-204ENST00000438395 PAX1P15863 534 aa6.9□□□□□ -1.3
VPS50-204ENST00000438395 PRPS1L1P21108 318 aa6.9□□□□□ -1.3
VPS50-204ENST00000438395 ENPP1P22413 925 aa6.9□□□□□ -1.3
VPS50-204ENST00000438395 PSMA4P25789 261 aaKnown RBP6.9□□□□□ -1.3
VPS50-204ENST00000438395 LOXP28300 417 aaPredicted RBP6.9□□□□□ -1.3
VPS50-204ENST00000438395 IDUAP35475 653 aa6.9□□□□□ -1.3
VPS50-204ENST00000438395 MAP3K8P41279 467 aa6.9□□□□□ -1.3
VPS50-204ENST00000438395 FRKP42685 505 aaPredicted RBP6.9□□□□□ -1.3
VPS50-204ENST00000438395 ATP12AP54707 1039 aa6.9□□□□□ -1.3
VPS50-204ENST00000438395 HPCAP84074 193 aa6.9□□□□□ -1.3
VPS50-204ENST00000438395 FAPQ12884 760 aa6.9□□□□□ -1.3
VPS50-204ENST00000438395 MAD2L1Q13257 205 aaPredicted RBP6.9□□□□□ -1.3
VPS50-204ENST00000438395 ITGADQ13349 1161 aa6.9□□□□□ -1.3
VPS50-204ENST00000438395 CBFBQ13951 182 aa6.9□□□□□ -1.3
VPS50-204ENST00000438395 PCLAFQ15004 111 aa6.9□□□□□ -1.3
VPS50-204ENST00000438395 MLC1Q15049 377 aa6.9□□□□□ -1.3
VPS50-204ENST00000438395 TAB1Q15750 504 aa6.9□□□□□ -1.3
VPS50-204ENST00000438395 CLEC12BQ2HXU8 276 aa6.9□□□□□ -1.3
VPS50-204ENST00000438395 PGS1Q32NB8 556 aa6.9□□□□□ -1.3
VPS50-204ENST00000438395 ARL13AQ5H913 290 aaPredicted RBP6.9□□□□□ -1.3
VPS50-204ENST00000438395 ATAD3BQ5T9A4 648 aa6.9□□□□□ -1.3
VPS50-204ENST00000438395 ADAM5Q6NVV9 412 aa6.9□□□□□ -1.3
VPS50-204ENST00000438395 Q6ZSR9 355 aa6.9□□□□□ -1.3
VPS50-204ENST00000438395 C22orf34Q6ZV56 151 aa6.9□□□□□ -1.3
VPS50-204ENST00000438395 BHLHA15Q7RTS1 189 aaPredicted RBP6.9□□□□□ -1.3
VPS50-204ENST00000438395 C16orf62Q7Z3J2 963 aa6.9□□□□□ -1.3
VPS50-204ENST00000438395 TUSC5Q8IXB3 177 aa6.9□□□□□ -1.3
VPS50-204ENST00000438395 UBE2J2Q8N2K1 259 aa6.9□□□□□ -1.3
VPS50-204ENST00000438395 RIBC1Q8N443 379 aaPredicted RBP6.9□□□□□ -1.3
VPS50-204ENST00000438395 EIF1ADQ8N9N8 165 aaKnown RBP6.9□□□□□ -1.3
VPS50-204ENST00000438395 OR5W2Q8NH69 310 aa6.9□□□□□ -1.3
VPS50-204ENST00000438395 OR2W6PQ8NHA6 318 aa6.9□□□□□ -1.3
VPS50-204ENST00000438395 FAM110BQ8TC76 370 aa6.9□□□□□ -1.3
VPS50-204ENST00000438395 SMAP2Q8WU79 429 aaPredicted RBP6.9□□□□□ -1.3
VPS50-204ENST00000438395 TMEM234Q8WY98 164 aa6.9□□□□□ -1.3
VPS50-204ENST00000438395 TUBGCP3Q96CW5 907 aa6.9□□□□□ -1.3
VPS50-204ENST00000438395 GIMAP5Q96F15 307 aa6.9□□□□□ -1.3
VPS50-204ENST00000438395 OR5B2Q96R09 309 aa6.9□□□□□ -1.3
VPS50-204ENST00000438395 TMEM204Q9BSN7 226 aa6.9□□□□□ -1.3
VPS50-204ENST00000438395 SRXN1Q9BYN0 137 aa6.9□□□□□ -1.3
VPS50-204ENST00000438395 KRTAP4-8Q9BYQ9 185 aa6.9□□□□□ -1.3
VPS50-204ENST00000438395 TXLNGYQ9BZA5 131 aa6.9□□□□□ -1.3
VPS50-204ENST00000438395 TUBB1Q9H4B7 451 aa6.9□□□□□ -1.3
VPS50-204ENST00000438395 ATP6V1HQ9UI12 483 aa6.9□□□□□ -1.3
VPS50-204ENST00000438395 POU2F3Q9UKI9 436 aa6.9□□□□□ -1.3
VPS50-204ENST00000438395 PCDHGB4Q9UN71 923 aa6.9□□□□□ -1.3
VPS50-204ENST00000438395 DTNAQ9Y4J8 743 aa6.9□□□□□ -1.3
VPS50-204ENST00000438395 CCT8L1PA6NM43 557 aa6.89□□□□□ -1.31
VPS50-204ENST00000438395 EIF4E2O60573 245 aaKnown RBP6.89□□□□□ -1.31
VPS50-204ENST00000438395 STX11O75558 287 aa6.89□□□□□ -1.31
VPS50-204ENST00000438395 LYZL6O75951 148 aa6.89□□□□□ -1.31
VPS50-204ENST00000438395 SLU7O95391 586 aaKnown RBP6.89□□□□□ -1.31
VPS50-204ENST00000438395 AGR2O95994 175 aa6.89□□□□□ -1.31
VPS50-204ENST00000438395 ADAP00813 363 aa6.89□□□□□ -1.31
VPS50-204ENST00000438395 CSTAP01040 98 aa6.89□□□□□ -1.31
VPS50-204ENST00000438395 IFNA2P01563 188 aa6.89□□□□□ -1.31
VPS50-204ENST00000438395 CHRNGP07510 517 aa6.89□□□□□ -1.31
VPS50-204ENST00000438395 FGF4P08620 206 aa6.89□□□□□ -1.31
VPS50-204ENST00000438395 LAMP1P11279 417 aa6.89□□□□□ -1.31
VPS50-204ENST00000438395 PRKCAP17252 672 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms