RNA–Protein interactions for RNA: ENST00000435213.6

GARNL3-205, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2 BASIC

Gene GARNL3, Length 3,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-205ENST00000435213 ACTG1P63261 375 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 ACTG2P63267 376 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 ACTC1P68032 377 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 ACTA1P68133 377 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 VEZF1Q14119 521 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 IHHQ14623 411 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 TSTQ16762 297 aaKnown RBP6.84□□□□□ -1.31
GARNL3-205ENST00000435213 ISXQ2M1V0 245 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 ZNF674Q2M3X9 581 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 C3orf38Q5JPI3 329 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 SFRP5Q5T4F7 317 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 ZNF468Q5VIY5 522 aaPredicted RBP6.84□□□□□ -1.31
GARNL3-205ENST00000435213 FDX2Q6P4F2 183 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 FAHD1Q6P587 224 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 C19orf48Q6RUI8 117 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 SSX7Q7RTT5 188 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 CACUL1Q86Y37 369 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 CMIPQ8IY22 773 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 OR4N4Q8N0Y3 316 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 OR4A15Q8NGL6 344 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 OR13C4Q8NGS5 318 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 OR6K3Q8NGY3 331 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 LCN9Q8WX39 176 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 CPNE2Q96FN4 548 aaPredicted RBP6.84□□□□□ -1.31
GARNL3-205ENST00000435213 SHDQ96IW2 340 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 CNTNAP3BQ96NU0 1288 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 MGLLQ99685 303 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 GABARAPL3Q9BY60 117 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 RNF39Q9H2S5 420 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 R3HDMLQ9H3Y0 253 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 CCL27Q9Y4X3 112 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 J3KR12 359 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 CLIC1O00299 241 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 SLC28A2O43868 658 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 TFP02787 698 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 SEMG1P04279 462 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 NT5EP21589 574 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 C21orf33P30042 268 aaPredicted RBP6.84□□□□□ -1.31
GARNL3-205ENST00000435213 NPBWR1P48145 328 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 IL2P60568 153 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 RPL38P63173 70 aaKnown RBP6.84□□□□□ -1.31
GARNL3-205ENST00000435213 HTD2P86397 168 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 GTF2H3Q13889 308 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 GPR176Q14439 515 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 TTLL9Q3SXZ7 439 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 RFTN2Q52LD8 501 aaPredicted RBP6.84□□□□□ -1.31
GARNL3-205ENST00000435213 ZNF613Q6PF04 617 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 GOLGA7Q7Z5G4 137 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 ANGPTL5Q86XS5 388 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 LIPHQ8WWY8 451 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 CDKN2AIPNLQ96HQ2 116 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 HRASLS5Q96KN8 279 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 VPS25Q9BRG1 176 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 ADAT1Q9BUB4 502 aaKnown RBP6.84□□□□□ -1.31
GARNL3-205ENST00000435213 RSRP1Q9BUV0 290 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 NLNQ9BYT8 704 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 PPP1R3EQ9H7J1 279 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 PDE7BQ9NP56 450 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 SLC9A8Q9Y2E8 581 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 SMIM35A0A1B0GVV1 85 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 MOXD2PA6NHM9 499 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 HMSDA8MTL9 139 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 GTPBP1O00178 669 aaKnown RBP6.84□□□□□ -1.31
GARNL3-205ENST00000435213 CYR61O00622 381 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 OR7A17O14581 309 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 PTGESO14684 152 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 PRODHO43272 600 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 FABP3P05413 133 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 UBBP0CG47 229 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 HOXB9P17482 250 aaPredicted RBP6.84□□□□□ -1.31
GARNL3-205ENST00000435213 PXNP49023 591 aaPredicted RBP6.84□□□□□ -1.31
GARNL3-205ENST00000435213 ZNF140P52738 457 aaPredicted RBP6.84□□□□□ -1.31
GARNL3-205ENST00000435213 RPS27AP62979 156 aaKnown RBP6.84□□□□□ -1.31
GARNL3-205ENST00000435213 UBA52P62987 128 aaKnown RBP6.84□□□□□ -1.31
GARNL3-205ENST00000435213 ARF5P84085 180 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 IL10RBQ08334 325 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 CNTN1Q12860 1018 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 NPRL3Q12980 569 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 GTF2H2Q13888 395 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 ABRAXAS2Q15018 415 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 RNF151Q2KHN1 245 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 ACTBL2Q562R1 376 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 NKAPLQ5M9Q1 402 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 SPANXN4Q5MJ08 99 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 ATAT1Q5SQI0 421 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 ARMC12Q5T9G4 340 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 GTF2H2CQ6P1K8 395 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 PRSS55Q6UWB4 352 aaPredicted RBP6.84□□□□□ -1.31
GARNL3-205ENST00000435213 LHFPL4Q7Z7J7 247 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 MRPL52Q86TS9 123 aaKnown RBP6.84□□□□□ -1.31
GARNL3-205ENST00000435213 TMEM200AQ86VY9 491 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 SYNPOQ8N3V7 929 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 DNASE1L2Q92874 299 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 CDK15Q96Q40 435 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 PCBD2Q9H0N5 130 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 ABCG5Q9H222 651 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 C2orf42Q9NWW7 574 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 SLCO1B1Q9Y6L6 691 aa6.84□□□□□ -1.31
GARNL3-205ENST00000435213 TBC1D3BA6NDS4 549 aa6.83□□□□□ -1.32
GARNL3-205ENST00000435213 A6NIZ1 184 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms