RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 CT45A8P0DMV1 189 aa11.82□□□□□ -0.52
DDX56-204ENST00000431640 CT45A9P0DMV2 189 aa11.82□□□□□ -0.52
DDX56-204ENST00000431640 GAAP10253 952 aa11.82□□□□□ -0.52
DDX56-204ENST00000431640 SAGP10523 405 aaPredicted RBP11.82□□□□□ -0.52
DDX56-204ENST00000431640 TBXA2RP21731 343 aa11.82□□□□□ -0.52
DDX56-204ENST00000431640 TGM1P22735 817 aa11.82□□□□□ -0.52
DDX56-204ENST00000431640 RPS19P39019 145 aaKnown RBP11.82□□□□□ -0.52
DDX56-204ENST00000431640 NBL1P41271 181 aa11.82□□□□□ -0.52
DDX56-204ENST00000431640 GFERP55789 205 aa11.82□□□□□ -0.52
DDX56-204ENST00000431640 GPR50Q13585 617 aa11.82□□□□□ -0.52
DDX56-204ENST00000431640 CT45A2Q5DJT8 189 aa11.82□□□□□ -0.52
DDX56-204ENST00000431640 ALG10BQ5I7T1 473 aa11.82□□□□□ -0.52
DDX56-204ENST00000431640 LINC00114Q6XXX2 140 aa11.82□□□□□ -0.52
DDX56-204ENST00000431640 TMPRSS11AQ6ZMR5 421 aa11.82□□□□□ -0.52
DDX56-204ENST00000431640 RABEPKQ7Z6M1 372 aa11.82□□□□□ -0.52
DDX56-204ENST00000431640 ZAR1Q86SH2 424 aa11.82□□□□□ -0.52
DDX56-204ENST00000431640 SLITRK4Q8IW52 837 aa11.82□□□□□ -0.52
DDX56-204ENST00000431640 ZNF615Q8N8J6 731 aa11.82□□□□□ -0.52
DDX56-204ENST00000431640 OR4N2Q8NGD1 307 aa11.82□□□□□ -0.52
DDX56-204ENST00000431640 OR4C6Q8NH72 309 aa11.82□□□□□ -0.52
DDX56-204ENST00000431640 C16orf52Q8NHV5 167 aa11.82□□□□□ -0.52
DDX56-204ENST00000431640 DNAJA4Q8WW22 397 aaPredicted RBP11.82□□□□□ -0.52
DDX56-204ENST00000431640 GATAD2BQ8WXI9 593 aa11.82□□□□□ -0.52
DDX56-204ENST00000431640 KCTD7Q96MP8 289 aa11.82□□□□□ -0.52
DDX56-204ENST00000431640 LRFN5Q96NI6 719 aa11.82□□□□□ -0.52
DDX56-204ENST00000431640 MED18Q9BUE0 208 aa11.82□□□□□ -0.52
DDX56-204ENST00000431640 ZNF426Q9BUY5 554 aa11.82□□□□□ -0.52
DDX56-204ENST00000431640 CMC2Q9NRP2 79 aa11.82□□□□□ -0.52
DDX56-204ENST00000431640 INPP5EQ9NRR6 644 aa11.82□□□□□ -0.52
DDX56-204ENST00000431640 CUTCQ9NTM9 273 aa11.82□□□□□ -0.52
DDX56-204ENST00000431640 CARD8Q9Y2G2 431 aa11.82□□□□□ -0.52
DDX56-204ENST00000431640 CLDN16Q9Y5I7 305 aa11.82□□□□□ -0.52
DDX56-204ENST00000431640 RNF215Q9Y6U7 377 aa11.82□□□□□ -0.52
DDX56-204ENST00000431640 RALGAPA1Q6GYQ0 2036 aa11.81□□□□□ -0.52
DDX56-204ENST00000431640 FUOMA2VDF0 154 aa11.81□□□□□ -0.52
DDX56-204ENST00000431640 SYNDIG1LA6NDD5 238 aa11.81□□□□□ -0.52
DDX56-204ENST00000431640 SERINC4A6NH21 518 aa11.81□□□□□ -0.52
DDX56-204ENST00000431640 SLC22A31A6NKX4 558 aa11.81□□□□□ -0.52
DDX56-204ENST00000431640 TMEM150CB9EJG8 249 aa11.81□□□□□ -0.52
DDX56-204ENST00000431640 CDX4O14627 284 aaPredicted RBP11.81□□□□□ -0.52
DDX56-204ENST00000431640 AKAP8O43823 692 aaKnown RBP11.81□□□□□ -0.52
DDX56-204ENST00000431640 PPM1BO75688 479 aa11.81□□□□□ -0.52
DDX56-204ENST00000431640 HK1P19367 917 aa11.81□□□□□ -0.52
DDX56-204ENST00000431640 MAOAP21397 527 aa11.81□□□□□ -0.52
DDX56-204ENST00000431640 FGF9P31371 208 aaPredicted RBP11.81□□□□□ -0.52
DDX56-204ENST00000431640 SLC6A6P31641 620 aa11.81□□□□□ -0.52
DDX56-204ENST00000431640 GABRA5P31644 462 aa11.81□□□□□ -0.52
DDX56-204ENST00000431640 ADH7P40394 386 aa11.81□□□□□ -0.52
DDX56-204ENST00000431640 CAPZA2P47755 286 aa11.81□□□□□ -0.52
DDX56-204ENST00000431640 RNF144AP50876 292 aaPredicted RBP11.81□□□□□ -0.52
DDX56-204ENST00000431640 PGDP52209 483 aa11.81□□□□□ -0.52
DDX56-204ENST00000431640 GPLD1P80108 840 aa11.81□□□□□ -0.52
DDX56-204ENST00000431640 FOXK2Q01167 660 aa11.81□□□□□ -0.52
DDX56-204ENST00000431640 BDH1Q02338 343 aa11.81□□□□□ -0.52
DDX56-204ENST00000431640 SPEM2Q0P670 501 aa11.81□□□□□ -0.52
DDX56-204ENST00000431640 COL9A2Q14055 689 aaPredicted RBP11.81□□□□□ -0.52
DDX56-204ENST00000431640 YOD1Q5VVQ6 348 aaPredicted RBP11.81□□□□□ -0.52
DDX56-204ENST00000431640 NPSR1Q6W5P4 371 aa11.81□□□□□ -0.52
DDX56-204ENST00000431640 OAFQ86UD1 273 aa11.81□□□□□ -0.52
DDX56-204ENST00000431640 KMT5CQ86Y97 462 aa11.81□□□□□ -0.52
DDX56-204ENST00000431640 BCORP1Q8N888 145 aa11.81□□□□□ -0.52
DDX56-204ENST00000431640 ZNF527Q8NB42 609 aa11.81□□□□□ -0.52
DDX56-204ENST00000431640 GRHL3Q8TE85 626 aa11.81□□□□□ -0.52
DDX56-204ENST00000431640 C1GALT1C1Q96EU7 318 aa11.81□□□□□ -0.52
DDX56-204ENST00000431640 PTCHD1Q96NR3 888 aa11.81□□□□□ -0.52
DDX56-204ENST00000431640 IFT27Q9BW83 186 aa11.81□□□□□ -0.52
DDX56-204ENST00000431640 SP140LQ9H930 580 aa11.81□□□□□ -0.52
DDX56-204ENST00000431640 MKKSQ9NPJ1 570 aaPredicted RBP11.81□□□□□ -0.52
DDX56-204ENST00000431640 ATP13A2Q9NQ11 1180 aa11.81□□□□□ -0.52
DDX56-204ENST00000431640 HINT3Q9NQE9 182 aaKnown RBP11.81□□□□□ -0.52
DDX56-204ENST00000431640 C20orf141Q9NUB4 165 aa11.81□□□□□ -0.52
DDX56-204ENST00000431640 TXNL4BQ9NX01 149 aaKnown RBP11.81□□□□□ -0.52
DDX56-204ENST00000431640 ERVK13-1Q9NX77 482 aa11.81□□□□□ -0.52
DDX56-204ENST00000431640 FLRT3Q9NZU0 649 aa11.81□□□□□ -0.52
DDX56-204ENST00000431640 CAB39Q9Y376 341 aaPredicted RBP11.81□□□□□ -0.52
DDX56-204ENST00000431640 COL27A1Q8IZC6 1860 aaPredicted RBP11.81□□□□□ -0.52
DDX56-204ENST00000431640 CABIN1Q9Y6J0 2220 aa11.81□□□□□ -0.52
DDX56-204ENST00000431640 IGHV1OR21-1A0A087WYE8 117 aa11.8□□□□□ -0.52
DDX56-204ENST00000431640 TRDV1A0A1B0GX56 115 aa11.8□□□□□ -0.52
DDX56-204ENST00000431640 RIIAD1A6NNX1 92 aa11.8□□□□□ -0.52
DDX56-204ENST00000431640 C17orf105B2RV13 164 aa11.8□□□□□ -0.52
DDX56-204ENST00000431640 PRR23D1E9PI22 279 aaPredicted RBP11.8□□□□□ -0.52
DDX56-204ENST00000431640 HRKO00198 91 aa11.8□□□□□ -0.52
DDX56-204ENST00000431640 KHNYNO15037 678 aaKnown RBP11.8□□□□□ -0.52
DDX56-204ENST00000431640 POLR1CO15160 346 aaPredicted RBP11.8□□□□□ -0.52
DDX56-204ENST00000431640 SIGLEC6O43699 453 aa11.8□□□□□ -0.52
DDX56-204ENST00000431640 DUX1O43812 170 aa11.8□□□□□ -0.52
DDX56-204ENST00000431640 CER1O95813 267 aa11.8□□□□□ -0.52
DDX56-204ENST00000431640 CSTAP01040 98 aa11.8□□□□□ -0.52
DDX56-204ENST00000431640 IFNGP01579 166 aa11.8□□□□□ -0.52
DDX56-204ENST00000431640 PRR23D2P0DMB1 279 aaPredicted RBP11.8□□□□□ -0.52
DDX56-204ENST00000431640 PEPDP12955 493 aa11.8□□□□□ -0.52
DDX56-204ENST00000431640 GLB1P16278 677 aa11.8□□□□□ -0.52
DDX56-204ENST00000431640 GALP22466 123 aa11.8□□□□□ -0.52
DDX56-204ENST00000431640 LCN1P31025 176 aa11.8□□□□□ -0.52
DDX56-204ENST00000431640 RORAP35398 523 aa11.8□□□□□ -0.52
DDX56-204ENST00000431640 PPICP45877 212 aa11.8□□□□□ -0.52
DDX56-204ENST00000431640 SLC9A3P48764 834 aa11.8□□□□□ -0.52
DDX56-204ENST00000431640 BCAP31P51572 246 aa11.8□□□□□ -0.52
DDX56-204ENST00000431640 IFITM3Q01628 133 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms