RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 GRM7Q14831 915 aa12.83□□□□□ -0.35
HOXC4-202ENST00000430889 ZNF79Q15937 498 aa12.83□□□□□ -0.35
HOXC4-202ENST00000430889 CRTC2Q53ET0 693 aaPredicted RBP12.83□□□□□ -0.35
HOXC4-202ENST00000430889 KLHL26Q53HC5 615 aa12.83□□□□□ -0.35
HOXC4-202ENST00000430889 ALG10BQ5I7T1 473 aa12.83□□□□□ -0.35
HOXC4-202ENST00000430889 SLC35F1Q5T1Q4 408 aa12.83□□□□□ -0.35
HOXC4-202ENST00000430889 ULK3Q6PHR2 472 aa12.83□□□□□ -0.35
HOXC4-202ENST00000430889 LAX1Q8IWV1 398 aa12.83□□□□□ -0.35
HOXC4-202ENST00000430889 CARFQ8N187 725 aa12.83□□□□□ -0.35
HOXC4-202ENST00000430889 METTL27Q8N6F8 245 aaPredicted RBP12.83□□□□□ -0.35
HOXC4-202ENST00000430889 ZFP41Q8N8Y5 198 aa12.83□□□□□ -0.35
HOXC4-202ENST00000430889 SLC37A3Q8NCC5 494 aa12.83□□□□□ -0.35
HOXC4-202ENST00000430889 OR7G1Q8NGA0 311 aa12.83□□□□□ -0.35
HOXC4-202ENST00000430889 OR4C3Q8NH37 302 aa12.83□□□□□ -0.35
HOXC4-202ENST00000430889 DNAJA4Q8WW22 397 aaPredicted RBP12.83□□□□□ -0.35
HOXC4-202ENST00000430889 HSPA12BQ96MM6 686 aa12.83□□□□□ -0.35
HOXC4-202ENST00000430889 PHOX2BQ99453 314 aa12.83□□□□□ -0.35
HOXC4-202ENST00000430889 INPP5EQ9NRR6 644 aa12.83□□□□□ -0.35
HOXC4-202ENST00000430889 HAO2Q9NYQ3 351 aa12.83□□□□□ -0.35
HOXC4-202ENST00000430889 H2AFY2Q9P0M6 372 aaPredicted RBP12.83□□□□□ -0.35
HOXC4-202ENST00000430889 MMACHCQ9Y4U1 282 aa12.83□□□□□ -0.35
HOXC4-202ENST00000430889 FAM86C2PA6NEL3 165 aa12.83□□□□□ -0.36
HOXC4-202ENST00000430889 SAGP10523 405 aaPredicted RBP12.83□□□□□ -0.36
HOXC4-202ENST00000430889 SPNP16150 400 aa12.83□□□□□ -0.36
HOXC4-202ENST00000430889 NOS3P29474 1203 aa12.83□□□□□ -0.36
HOXC4-202ENST00000430889 ADH7P40394 386 aa12.83□□□□□ -0.36
HOXC4-202ENST00000430889 RPL6Q02878 288 aaKnown RBP12.83□□□□□ -0.36
HOXC4-202ENST00000430889 HNRNPA0Q13151 305 aaKnown RBP12.83□□□□□ -0.36
HOXC4-202ENST00000430889 GLYR1Q49A26 553 aaPredicted RBP12.83□□□□□ -0.36
HOXC4-202ENST00000430889 NKAIN2Q5VXU1 208 aa12.83□□□□□ -0.36
HOXC4-202ENST00000430889 B3GLCTQ6Y288 498 aa12.83□□□□□ -0.36
HOXC4-202ENST00000430889 ACBD7Q8N6N7 88 aa12.83□□□□□ -0.36
HOXC4-202ENST00000430889 ZNF614Q8N883 585 aa12.83□□□□□ -0.36
HOXC4-202ENST00000430889 OR51G2Q8NGK0 314 aa12.83□□□□□ -0.36
HOXC4-202ENST00000430889 PTPMT1Q8WUK0 201 aaPredicted RBP12.83□□□□□ -0.36
HOXC4-202ENST00000430889 DNASE2BQ8WZ79 361 aa12.83□□□□□ -0.36
HOXC4-202ENST00000430889 C1GALT1C1Q96EU7 318 aa12.83□□□□□ -0.36
HOXC4-202ENST00000430889 ZDHHC12Q96GR4 267 aa12.83□□□□□ -0.36
HOXC4-202ENST00000430889 TNFRSF13CQ96RJ3 184 aa12.83□□□□□ -0.36
HOXC4-202ENST00000430889 IFT27Q9BW83 186 aa12.83□□□□□ -0.36
HOXC4-202ENST00000430889 SRRQ9GZT4 340 aa12.83□□□□□ -0.36
HOXC4-202ENST00000430889 ISG20L2Q9H9L3 353 aaKnown RBP12.83□□□□□ -0.36
HOXC4-202ENST00000430889 SOHLH2Q9NX45 425 aa12.83□□□□□ -0.36
HOXC4-202ENST00000430889 PRODH2Q9UF12 536 aa12.83□□□□□ -0.36
HOXC4-202ENST00000430889 CHRNA9Q9UGM1 479 aa12.83□□□□□ -0.36
HOXC4-202ENST00000430889 GMEB2Q9UKD1 530 aa12.83□□□□□ -0.36
HOXC4-202ENST00000430889 CMAHPQ9Y471 501 aa12.83□□□□□ -0.36
HOXC4-202ENST00000430889 MPDZO75970 2070 aa12.82□□□□□ -0.36
HOXC4-202ENST00000430889 A0A087WUJ7 227 aa12.82□□□□□ -0.36
HOXC4-202ENST00000430889 IGHV1OR21-1A0A087WYE8 117 aa12.82□□□□□ -0.36
HOXC4-202ENST00000430889 SHISA3A0PJX4 238 aa12.82□□□□□ -0.36
HOXC4-202ENST00000430889 SLC22A31A6NKX4 558 aa12.82□□□□□ -0.36
HOXC4-202ENST00000430889 C12orf71A8MTZ7 269 aa12.82□□□□□ -0.36
HOXC4-202ENST00000430889 PPP1R3DO95685 299 aa12.82□□□□□ -0.36
HOXC4-202ENST00000430889 PEPDP12955 493 aa12.82□□□□□ -0.36
HOXC4-202ENST00000430889 BCKDHBP21953 392 aa12.82□□□□□ -0.36
HOXC4-202ENST00000430889 SEPHS1P49903 392 aa12.82□□□□□ -0.36
HOXC4-202ENST00000430889 PGDP52209 483 aa12.82□□□□□ -0.36
HOXC4-202ENST00000430889 EFNA3P52797 238 aa12.82□□□□□ -0.36
HOXC4-202ENST00000430889 SLC37A1P57057 533 aa12.82□□□□□ -0.36
HOXC4-202ENST00000430889 GALEQ14376 348 aa12.82□□□□□ -0.36
HOXC4-202ENST00000430889 KCNAB1Q14722 419 aa12.82□□□□□ -0.36
HOXC4-202ENST00000430889 NNATQ16517 81 aa12.82□□□□□ -0.36
HOXC4-202ENST00000430889 NDUFAF6Q330K2 333 aa12.82□□□□□ -0.36
HOXC4-202ENST00000430889 TMEM91Q6ZNR0 172 aa12.82□□□□□ -0.36
HOXC4-202ENST00000430889 RTL4Q6ZR62 310 aa12.82□□□□□ -0.36
HOXC4-202ENST00000430889 OAFQ86UD1 273 aa12.82□□□□□ -0.36
HOXC4-202ENST00000430889 SPEM1Q8N4L4 309 aa12.82□□□□□ -0.36
HOXC4-202ENST00000430889 POC5Q8NA72 575 aa12.82□□□□□ -0.36
HOXC4-202ENST00000430889 OR51A7Q8NH64 312 aa12.82□□□□□ -0.36
HOXC4-202ENST00000430889 SLC2A12Q8TD20 617 aa12.82□□□□□ -0.36
HOXC4-202ENST00000430889 ITPKCQ96DU7 683 aa12.82□□□□□ -0.36
HOXC4-202ENST00000430889 MVB12AQ96EY5 273 aa12.82□□□□□ -0.36
HOXC4-202ENST00000430889 LRFN5Q96NI6 719 aa12.82□□□□□ -0.36
HOXC4-202ENST00000430889 OR1F2PQ96R84 312 aa12.82□□□□□ -0.36
HOXC4-202ENST00000430889 LMF1Q96S06 567 aa12.82□□□□□ -0.36
HOXC4-202ENST00000430889 TEAD3Q99594 435 aa12.82□□□□□ -0.36
HOXC4-202ENST00000430889 ADGRL4Q9HBW9 690 aa12.82□□□□□ -0.36
HOXC4-202ENST00000430889 CUTCQ9NTM9 273 aa12.82□□□□□ -0.36
HOXC4-202ENST00000430889 TOR4AQ9NXH8 423 aa12.82□□□□□ -0.36
HOXC4-202ENST00000430889 WNT16Q9UBV4 365 aa12.82□□□□□ -0.36
HOXC4-202ENST00000430889 POLHQ9Y253 713 aa12.82□□□□□ -0.36
HOXC4-202ENST00000430889 SIRT4Q9Y6E7 314 aaPredicted RBP12.82□□□□□ -0.36
HOXC4-202ENST00000430889 PRR23D1E9PI22 279 aaPredicted RBP12.81□□□□□ -0.36
HOXC4-202ENST00000430889 GABRPO00591 440 aa12.81□□□□□ -0.36
HOXC4-202ENST00000430889 SDC3O75056 442 aa12.81□□□□□ -0.36
HOXC4-202ENST00000430889 IGKV3-11P04433 115 aa12.81□□□□□ -0.36
HOXC4-202ENST00000430889 GIMD1P0DJR0 217 aa12.81□□□□□ -0.36
HOXC4-202ENST00000430889 PRR23D2P0DMB1 279 aaPredicted RBP12.81□□□□□ -0.36
HOXC4-202ENST00000430889 SLC6A6P31641 620 aa12.81□□□□□ -0.36
HOXC4-202ENST00000430889 CSTF1Q05048 431 aaKnown RBP12.81□□□□□ -0.36
HOXC4-202ENST00000430889 MXD1Q05195 221 aa12.81□□□□□ -0.36
HOXC4-202ENST00000430889 CRMP1Q14194 572 aa12.81□□□□□ -0.36
HOXC4-202ENST00000430889 ARHGAP11AQ6P4F7 1023 aa12.81□□□□□ -0.36
HOXC4-202ENST00000430889 TMPRSS11AQ6ZMR5 421 aa12.81□□□□□ -0.36
HOXC4-202ENST00000430889 CAMKK1Q8N5S9 505 aa12.81□□□□□ -0.36
HOXC4-202ENST00000430889 ZNF321PQ8N8H1 164 aa12.81□□□□□ -0.36
HOXC4-202ENST00000430889 ATP6V1C2Q8NEY4 427 aa12.81□□□□□ -0.36
HOXC4-202ENST00000430889 RNF217Q8TC41 542 aa12.81□□□□□ -0.36
HOXC4-202ENST00000430889 CLDN23Q96B33 292 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms