RNA–Protein interactions for RNA: ENST00000430682.5

SMPD4-204, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-204ENST00000430682 PIWIL2Q8TC59 973 aaKnown RBP11.16□□□□□ -0.62
SMPD4-204ENST00000430682 RNF128Q8TEB7 428 aa11.16□□□□□ -0.62
SMPD4-204ENST00000430682 DNAJA3Q96EY1 480 aa11.16□□□□□ -0.62
SMPD4-204ENST00000430682 ZC3HAV1LQ96H79 300 aaKnown RBP11.16□□□□□ -0.62
SMPD4-204ENST00000430682 MRGPRX4Q96LA9 322 aa11.16□□□□□ -0.62
SMPD4-204ENST00000430682 PANX1Q96RD7 426 aa11.16□□□□□ -0.62
SMPD4-204ENST00000430682 C12orf49Q9H741 205 aa11.16□□□□□ -0.62
SMPD4-204ENST00000430682 HHATLQ9HCP6 504 aa11.16□□□□□ -0.62
SMPD4-204ENST00000430682 EXD2Q9NVH0 621 aa11.16□□□□□ -0.62
SMPD4-204ENST00000430682 NKIRAS1Q9NYS0 192 aa11.16□□□□□ -0.62
SMPD4-204ENST00000430682 MCTS1Q9ULC4 181 aaKnown RBP11.16□□□□□ -0.62
SMPD4-204ENST00000430682 WDR45Q9Y484 360 aa11.16□□□□□ -0.62
SMPD4-204ENST00000430682 PLCE1Q9P212 2302 aa11.15□□□□□ -0.62
SMPD4-204ENST00000430682 C16orf97H3BN30 126 aa11.15□□□□□ -0.62
SMPD4-204ENST00000430682 AP3D1O14617 1153 aa11.15□□□□□ -0.62
SMPD4-204ENST00000430682 KLF11O14901 512 aa11.15□□□□□ -0.62
SMPD4-204ENST00000430682 SYNGR4O95473 234 aa11.15□□□□□ -0.62
SMPD4-204ENST00000430682 GUSBP08236 651 aa11.15□□□□□ -0.62
SMPD4-204ENST00000430682 ME2P23368 584 aa11.15□□□□□ -0.62
SMPD4-204ENST00000430682 KCNJ5P48544 419 aa11.15□□□□□ -0.62
SMPD4-204ENST00000430682 KHKP50053 298 aa11.15□□□□□ -0.62
SMPD4-204ENST00000430682 CBFBQ13951 182 aa11.15□□□□□ -0.62
SMPD4-204ENST00000430682 TSC22D1Q15714 1073 aa11.15□□□□□ -0.62
SMPD4-204ENST00000430682 GPAT3Q53EU6 434 aa11.15□□□□□ -0.62
SMPD4-204ENST00000430682 EPGNQ6UW88 154 aa11.15□□□□□ -0.62
SMPD4-204ENST00000430682 TUSC5Q8IXB3 177 aa11.15□□□□□ -0.62
SMPD4-204ENST00000430682 VPS37AQ8NEZ2 397 aa11.15□□□□□ -0.62
SMPD4-204ENST00000430682 TOR1AIP2Q8NFQ8 470 aa11.15□□□□□ -0.62
SMPD4-204ENST00000430682 ZFP90Q8TF47 636 aa11.15□□□□□ -0.62
SMPD4-204ENST00000430682 VPS33AQ96AX1 596 aa11.15□□□□□ -0.62
SMPD4-204ENST00000430682 AURKBQ96GD4 344 aaPredicted RBP11.15□□□□□ -0.62
SMPD4-204ENST00000430682 FOXC2Q99958 501 aa11.15□□□□□ -0.62
SMPD4-204ENST00000430682 EBF4Q9BQW3 602 aa11.15□□□□□ -0.62
SMPD4-204ENST00000430682 RSPO3Q9BXY4 272 aaPredicted RBP11.15□□□□□ -0.62
SMPD4-204ENST00000430682 KLHL4Q9C0H6 718 aa11.15□□□□□ -0.62
SMPD4-204ENST00000430682 SDR39U1Q9NRG7 319 aaPredicted RBP11.15□□□□□ -0.62
SMPD4-204ENST00000430682 PAQR5Q9NXK6 330 aaPredicted RBP11.15□□□□□ -0.62
SMPD4-204ENST00000430682 ELOVL5Q9NYP7 299 aa11.15□□□□□ -0.62
SMPD4-204ENST00000430682 STOML1Q9UBI4 398 aa11.15□□□□□ -0.62
SMPD4-204ENST00000430682 NDRG3Q9UGV2 375 aa11.15□□□□□ -0.62
SMPD4-204ENST00000430682 USH1CQ9Y6N9 552 aa11.15□□□□□ -0.62
SMPD4-204ENST00000430682 TLN2Q9Y4G6 2542 aa11.14□□□□□ -0.63
SMPD4-204ENST00000430682 HEATR1Q9H583 2144 aaKnown RBP11.14□□□□□ -0.63
SMPD4-204ENST00000430682 SMAD9O15198 467 aaKnown RBP11.14□□□□□ -0.63
SMPD4-204ENST00000430682 KLF4O43474 513 aa11.14□□□□□ -0.63
SMPD4-204ENST00000430682 SLC22A3O75751 556 aa11.14□□□□□ -0.63
SMPD4-204ENST00000430682 PLGP00747 810 aaPredicted RBP11.14□□□□□ -0.63
SMPD4-204ENST00000430682 IDO1P14902 403 aa11.14□□□□□ -0.63
SMPD4-204ENST00000430682 HOXB9P17482 250 aaPredicted RBP11.14□□□□□ -0.63
SMPD4-204ENST00000430682 CD53P19397 219 aa11.14□□□□□ -0.63
SMPD4-204ENST00000430682 CRYGSP22914 178 aa11.14□□□□□ -0.63
SMPD4-204ENST00000430682 RYKP34925 604 aa11.14□□□□□ -0.63
SMPD4-204ENST00000430682 CTBP2P56545 445 aa11.14□□□□□ -0.63
SMPD4-204ENST00000430682 KCNJ10P78508 379 aa11.14□□□□□ -0.63
SMPD4-204ENST00000430682 ATAD3BQ5T9A4 648 aa11.14□□□□□ -0.63
SMPD4-204ENST00000430682 PLEKHM3Q6ZWE6 761 aa11.14□□□□□ -0.63
SMPD4-204ENST00000430682 EIF3MQ7L2H7 374 aaKnown RBP11.14□□□□□ -0.63
SMPD4-204ENST00000430682 FCRLAQ7L513 359 aa11.14□□□□□ -0.63
SMPD4-204ENST00000430682 KRTAP1-3Q8IUG1 177 aa11.14□□□□□ -0.63
SMPD4-204ENST00000430682 FUNDC1Q8IVP5 155 aa11.14□□□□□ -0.63
SMPD4-204ENST00000430682 NINJ1Q92982 152 aa11.14□□□□□ -0.63
SMPD4-204ENST00000430682 ZNF775Q96BV0 537 aaPredicted RBP11.14□□□□□ -0.63
SMPD4-204ENST00000430682 ATP6V1G3Q96LB4 118 aa11.14□□□□□ -0.63
SMPD4-204ENST00000430682 MED18Q9BUE0 208 aa11.14□□□□□ -0.63
SMPD4-204ENST00000430682 CCDC106Q9BWC9 280 aa11.14□□□□□ -0.63
SMPD4-204ENST00000430682 CTPS2Q9NRF8 586 aa11.14□□□□□ -0.63
SMPD4-204ENST00000430682 ACER3Q9NUN7 267 aa11.14□□□□□ -0.63
SMPD4-204ENST00000430682 EMC9Q9Y3B6 208 aa11.14□□□□□ -0.63
SMPD4-204ENST00000430682 CHST2Q9Y4C5 530 aa11.14□□□□□ -0.63
SMPD4-204ENST00000430682 NSD1Q96L73 2696 aaPredicted RBP11.14□□□□□ -0.63
SMPD4-204ENST00000430682 ZNF814B7Z6K7 855 aa11.13□□□□□ -0.63
SMPD4-204ENST00000430682 SLCO1B7G3V0H7 640 aa11.13□□□□□ -0.63
SMPD4-204ENST00000430682 UBDO15205 165 aa11.13□□□□□ -0.63
SMPD4-204ENST00000430682 DIAPH2O60879 1101 aa11.13□□□□□ -0.63
SMPD4-204ENST00000430682 GCM2O75603 506 aaPredicted RBP11.13□□□□□ -0.63
SMPD4-204ENST00000430682 AGR2O95994 175 aa11.13□□□□□ -0.63
SMPD4-204ENST00000430682 ETFAP13804 333 aa11.13□□□□□ -0.63
SMPD4-204ENST00000430682 RPS4Y1P22090 263 aaKnown RBP11.13□□□□□ -0.63
SMPD4-204ENST00000430682 DNASE1P24855 282 aa11.13□□□□□ -0.63
SMPD4-204ENST00000430682 IDH3AP50213 366 aa11.13□□□□□ -0.63
SMPD4-204ENST00000430682 MERTKQ12866 999 aa11.13□□□□□ -0.63
SMPD4-204ENST00000430682 SELENBP1Q13228 472 aa11.13□□□□□ -0.63
SMPD4-204ENST00000430682 PDSS1Q5T2R2 415 aa11.13□□□□□ -0.63
SMPD4-204ENST00000430682 FBXW10Q5XX13 1052 aa11.13□□□□□ -0.63
SMPD4-204ENST00000430682 TFAP2EQ6VUC0 442 aa11.13□□□□□ -0.63
SMPD4-204ENST00000430682 LRRC74BQ6ZQY2 392 aa11.13□□□□□ -0.63
SMPD4-204ENST00000430682 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.13□□□□□ -0.63
SMPD4-204ENST00000430682 ADGRG3Q86Y34 549 aa11.13□□□□□ -0.63
SMPD4-204ENST00000430682 C10orf111Q8N326 155 aa11.13□□□□□ -0.63
SMPD4-204ENST00000430682 GLB1L3Q8NCI6 653 aaPredicted RBP11.13□□□□□ -0.63
SMPD4-204ENST00000430682 ST8SIA1Q92185 356 aa11.13□□□□□ -0.63
SMPD4-204ENST00000430682 CPNE4Q96A23 557 aaPredicted RBP11.13□□□□□ -0.63
SMPD4-204ENST00000430682 MBD6Q96DN6 1003 aa11.13□□□□□ -0.63
SMPD4-204ENST00000430682 PIK3IP1Q96FE7 263 aa11.13□□□□□ -0.63
SMPD4-204ENST00000430682 ARL5BQ96KC2 179 aa11.13□□□□□ -0.63
SMPD4-204ENST00000430682 TRNT1Q96Q11 434 aaKnown RBP11.13□□□□□ -0.63
SMPD4-204ENST00000430682 OR5B2Q96R09 309 aa11.13□□□□□ -0.63
SMPD4-204ENST00000430682 ZNF300Q96RE9 604 aaPredicted RBP11.13□□□□□ -0.63
SMPD4-204ENST00000430682 PSD2Q9BQI7 771 aa11.13□□□□□ -0.63
SMPD4-204ENST00000430682 SLC39A3Q9BRY0 314 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms