RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 PLEKHM3Q6ZWE6 761 aa13.5□□□□□ -0.25
GARNL3-204ENST00000429629 HMGN2P46Q86SG4 172 aa13.5□□□□□ -0.25
GARNL3-204ENST00000429629 ADGRE4PQ86SQ3 457 aa13.5□□□□□ -0.25
GARNL3-204ENST00000429629 ULK2Q8IYT8 1036 aa13.5□□□□□ -0.25
GARNL3-204ENST00000429629 ZNF563Q8TA94 476 aa13.5□□□□□ -0.25
GARNL3-204ENST00000429629 PHF10Q8WUB8 498 aaKnown RBP13.5□□□□□ -0.25
GARNL3-204ENST00000429629 SLC25A43Q8WUT9 341 aaPredicted RBP13.5□□□□□ -0.25
GARNL3-204ENST00000429629 LZICQ8WZA0 190 aa13.5□□□□□ -0.25
GARNL3-204ENST00000429629 ARHGDIGQ99819 225 aa13.5□□□□□ -0.25
GARNL3-204ENST00000429629 KLHDC3Q9BQ90 382 aa13.5□□□□□ -0.25
GARNL3-204ENST00000429629 ZNF559Q9BR84 538 aa13.5□□□□□ -0.25
GARNL3-204ENST00000429629 TRIM2Q9C040 744 aa13.5□□□□□ -0.25
GARNL3-204ENST00000429629 PCDHAC1Q9H158 963 aa13.5□□□□□ -0.25
GARNL3-204ENST00000429629 CALHM2Q9HA72 323 aa13.5□□□□□ -0.25
GARNL3-204ENST00000429629 EXPH5Q8NEV8 1989 aa13.5□□□□□ -0.25
GARNL3-204ENST00000429629 TMEM229AB2RXF0 380 aa13.49□□□□□ -0.25
GARNL3-204ENST00000429629 GSTA4O15217 222 aa13.49□□□□□ -0.25
GARNL3-204ENST00000429629 ZNF208O43345 1280 aa13.49□□□□□ -0.25
GARNL3-204ENST00000429629 TPOP07202 933 aa13.49□□□□□ -0.25
GARNL3-204ENST00000429629 POU3F2P20265 443 aaPredicted RBP13.49□□□□□ -0.25
GARNL3-204ENST00000429629 ME2P23368 584 aa13.49□□□□□ -0.25
GARNL3-204ENST00000429629 ACVR2AP27037 513 aa13.49□□□□□ -0.25
GARNL3-204ENST00000429629 RYKP34925 604 aa13.49□□□□□ -0.25
GARNL3-204ENST00000429629 ZNF136P52737 540 aa13.49□□□□□ -0.25
GARNL3-204ENST00000429629 BNIP2Q12982 314 aa13.49□□□□□ -0.25
GARNL3-204ENST00000429629 SELENBP1Q13228 472 aa13.49□□□□□ -0.25
GARNL3-204ENST00000429629 C3AR1Q16581 482 aa13.49□□□□□ -0.25
GARNL3-204ENST00000429629 SWT1Q5T5J6 900 aaKnown RBP13.49□□□□□ -0.25
GARNL3-204ENST00000429629 RINLQ6ZS11 566 aa13.49□□□□□ -0.25
GARNL3-204ENST00000429629 CBLL1Q75N03 491 aa13.49□□□□□ -0.25
GARNL3-204ENST00000429629 MEIOBQ8N635 442 aa13.49□□□□□ -0.25
GARNL3-204ENST00000429629 GPR32P1Q8NGA4 272 aa13.49□□□□□ -0.25
GARNL3-204ENST00000429629 PRR7Q8TB68 274 aa13.49□□□□□ -0.25
GARNL3-204ENST00000429629 DNAJA4Q8WW22 397 aaPredicted RBP13.49□□□□□ -0.25
GARNL3-204ENST00000429629 PROX1Q92786 737 aa13.49□□□□□ -0.25
GARNL3-204ENST00000429629 ZNF524Q96C55 264 aa13.49□□□□□ -0.25
GARNL3-204ENST00000429629 BTBD10Q9BSF8 475 aa13.49□□□□□ -0.25
GARNL3-204ENST00000429629 POLR2J2Q9GZM3 115 aaKnown RBP13.49□□□□□ -0.25
GARNL3-204ENST00000429629 POLR2J3Q9H1A7 115 aaKnown RBP13.49□□□□□ -0.25
GARNL3-204ENST00000429629 MUC13Q9H3R2 512 aa13.49□□□□□ -0.25
GARNL3-204ENST00000429629 PNPLA3Q9NST1 481 aa13.49□□□□□ -0.25
GARNL3-204ENST00000429629 ADPRHL2Q9NX46 363 aa13.49□□□□□ -0.25
GARNL3-204ENST00000429629 TESQ9UGI8 421 aaKnown RBP13.49□□□□□ -0.25
GARNL3-204ENST00000429629 MAGEL2Q9UJ55 1249 aa13.49□□□□□ -0.25
GARNL3-204ENST00000429629 USP22Q9UPT9 525 aa13.49□□□□□ -0.25
GARNL3-204ENST00000429629 SLC5A6Q9Y289 635 aa13.49□□□□□ -0.25
GARNL3-204ENST00000429629 SLC9A8Q9Y2E8 581 aa13.49□□□□□ -0.25
GARNL3-204ENST00000429629 SPIN1Q9Y657 262 aaPredicted RBP13.49□□□□□ -0.25
GARNL3-204ENST00000429629 SHANK1Q9Y566 2161 aa13.48□□□□□ -0.25
GARNL3-204ENST00000429629 NBASA2RRP1 2371 aa13.48□□□□□ -0.25
GARNL3-204ENST00000429629 TRGV8A0A0C4DH27 118 aa13.48□□□□□ -0.25
GARNL3-204ENST00000429629 CLEC18AA5D8T8 446 aa13.48□□□□□ -0.25
GARNL3-204ENST00000429629 CD8B2A6NJW9 211 aa13.48□□□□□ -0.25
GARNL3-204ENST00000429629 AP3D1O14617 1153 aa13.48□□□□□ -0.25
GARNL3-204ENST00000429629 EFNA2O43921 213 aa13.48□□□□□ -0.25
GARNL3-204ENST00000429629 UQCRFS1P47985 274 aa13.48□□□□□ -0.25
GARNL3-204ENST00000429629 RNF144AP50876 292 aaPredicted RBP13.48□□□□□ -0.25
GARNL3-204ENST00000429629 POLR2HP52434 150 aaKnown RBP13.48□□□□□ -0.25
GARNL3-204ENST00000429629 RPS3AP61247 264 aaKnown RBP13.48□□□□□ -0.25
GARNL3-204ENST00000429629 KCNC4Q03721 635 aa13.48□□□□□ -0.25
GARNL3-204ENST00000429629 FOXF1Q12946 379 aa13.48□□□□□ -0.25
GARNL3-204ENST00000429629 CEACAM7Q14002 265 aa13.48□□□□□ -0.25
GARNL3-204ENST00000429629 GLIPR1L2Q4G1C9 344 aa13.48□□□□□ -0.25
GARNL3-204ENST00000429629 CYBRD1Q53TN4 286 aa13.48□□□□□ -0.25
GARNL3-204ENST00000429629 PDSS1Q5T2R2 415 aa13.48□□□□□ -0.25
GARNL3-204ENST00000429629 NSUN5P2Q63ZY6 315 aa13.48□□□□□ -0.25
GARNL3-204ENST00000429629 GLYATQ6IB77 296 aa13.48□□□□□ -0.25
GARNL3-204ENST00000429629 C3orf33Q6P1S2 294 aa13.48□□□□□ -0.25
GARNL3-204ENST00000429629 CLEC18BQ6UXF7 455 aa13.48□□□□□ -0.25
GARNL3-204ENST00000429629 CD163Q86VB7 1156 aa13.48□□□□□ -0.25
GARNL3-204ENST00000429629 RANBP3LQ86VV4 465 aaPredicted RBP13.48□□□□□ -0.25
GARNL3-204ENST00000429629 ADGRG3Q86Y34 549 aa13.48□□□□□ -0.25
GARNL3-204ENST00000429629 LILRA2Q8N149 483 aa13.48□□□□□ -0.25
GARNL3-204ENST00000429629 SMYD1Q8NB12 490 aa13.48□□□□□ -0.25
GARNL3-204ENST00000429629 CLEC18CQ8NCF0 446 aa13.48□□□□□ -0.25
GARNL3-204ENST00000429629 SLC7A6OSQ96CW6 309 aaPredicted RBP13.48□□□□□ -0.25
GARNL3-204ENST00000429629 ADGRG7Q96K78 797 aa13.48□□□□□ -0.25
GARNL3-204ENST00000429629 DMRTA2Q96SC8 542 aa13.48□□□□□ -0.25
GARNL3-204ENST00000429629 DCAF13Q9NV06 445 aaKnown RBP13.48□□□□□ -0.25
GARNL3-204ENST00000429629 RPS6KA6Q9UK32 745 aa13.48□□□□□ -0.25
GARNL3-204ENST00000429629 MEMO1Q9Y316 297 aa13.48□□□□□ -0.25
GARNL3-204ENST00000429629 UBR5O95071 2799 aaPredicted RBP13.48□□□□□ -0.25
GARNL3-204ENST00000429629 NINQ8N4C6 2090 aa13.48□□□□□ -0.25
GARNL3-204ENST00000429629 WIPF3A6NGB9 483 aa13.47□□□□□ -0.25
GARNL3-204ENST00000429629 GYG2O15488 501 aa13.47□□□□□ -0.25
GARNL3-204ENST00000429629 GMFGO60234 142 aa13.47□□□□□ -0.25
GARNL3-204ENST00000429629 GKN3PP0CG01 181 aa13.47□□□□□ -0.25
GARNL3-204ENST00000429629 PNMTP11086 282 aa13.47□□□□□ -0.25
GARNL3-204ENST00000429629 PRG2P13727 222 aa13.47□□□□□ -0.25
GARNL3-204ENST00000429629 STARP49675 285 aa13.47□□□□□ -0.25
GARNL3-204ENST00000429629 PER3P56645 1201 aa13.47□□□□□ -0.25
GARNL3-204ENST00000429629 CLDN15P56746 228 aa13.47□□□□□ -0.25
GARNL3-204ENST00000429629 RGS8P57771 180 aaPredicted RBP13.47□□□□□ -0.25
GARNL3-204ENST00000429629 MERTKQ12866 999 aa13.47□□□□□ -0.25
GARNL3-204ENST00000429629 DCST1Q5T197 706 aa13.47□□□□□ -0.25
GARNL3-204ENST00000429629 ZNF613Q6PF04 617 aa13.47□□□□□ -0.25
GARNL3-204ENST00000429629 ULK3Q6PHR2 472 aa13.47□□□□□ -0.25
GARNL3-204ENST00000429629 GGNQ86UU5 652 aa13.47□□□□□ -0.25
GARNL3-204ENST00000429629 COMTD1Q86VU5 262 aa13.47□□□□□ -0.25
GARNL3-204ENST00000429629 FIG4Q92562 907 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms