RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 HHIPQ96QV1 700 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 THAP7Q9BT49 309 aaPredicted RBP7.5□□□□□ -1.21
HPS4-205ENST00000429411 ACTRT3Q9BYD9 372 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 MKRN2Q9H000 416 aaKnown RBP7.5□□□□□ -1.21
HPS4-205ENST00000429411 LRRN3Q9H3W5 708 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 FN3KQ9H479 309 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 EPHX3Q9H6B9 360 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 APOBEC3BQ9UH17 382 aaKnown RBP7.5□□□□□ -1.21
HPS4-205ENST00000429411 NDOR1Q9UHB4 597 aa7.5□□□□□ -1.21
HPS4-205ENST00000429411 ZSCAN5BA6NJL1 495 aa7.49□□□□□ -1.21
HPS4-205ENST00000429411 PAPLNO95428 1278 aa7.49□□□□□ -1.21
HPS4-205ENST00000429411 ARSBP15848 533 aa7.49□□□□□ -1.21
HPS4-205ENST00000429411 EDNRAP25101 427 aa7.49□□□□□ -1.21
HPS4-205ENST00000429411 GIFP27352 417 aa7.49□□□□□ -1.21
HPS4-205ENST00000429411 TEAD1P28347 426 aa7.49□□□□□ -1.21
HPS4-205ENST00000429411 VSX2P58304 361 aaPredicted RBP7.49□□□□□ -1.21
HPS4-205ENST00000429411 RELQ04864 619 aaPredicted RBP7.49□□□□□ -1.21
HPS4-205ENST00000429411 CRMP1Q14194 572 aa7.49□□□□□ -1.21
HPS4-205ENST00000429411 ERV3-1Q14264 604 aa7.49□□□□□ -1.21
HPS4-205ENST00000429411 DUSP5Q16690 384 aa7.49□□□□□ -1.21
HPS4-205ENST00000429411 MRPL2Q5T653 305 aaKnown RBP7.49□□□□□ -1.21
HPS4-205ENST00000429411 HES5Q5TA89 166 aa7.49□□□□□ -1.21
HPS4-205ENST00000429411 BICRALQ6AI39 1079 aa7.49□□□□□ -1.21
HPS4-205ENST00000429411 C11orf88Q6PI97 169 aa7.49□□□□□ -1.21
HPS4-205ENST00000429411 GPR155Q7Z3F1 870 aa7.49□□□□□ -1.21
HPS4-205ENST00000429411 ASPGQ86U10 573 aa7.49□□□□□ -1.21
HPS4-205ENST00000429411 ELMOD2Q8IZ81 293 aa7.49□□□□□ -1.21
HPS4-205ENST00000429411 LINC00471Q8N535 108 aa7.49□□□□□ -1.21
HPS4-205ENST00000429411 SIRT6Q8N6T7 355 aa7.49□□□□□ -1.21
HPS4-205ENST00000429411 OR4M1Q8NGD0 313 aa7.49□□□□□ -1.21
HPS4-205ENST00000429411 OR5W2Q8NH69 310 aa7.49□□□□□ -1.21
HPS4-205ENST00000429411 CHAC2Q8WUX2 184 aa7.49□□□□□ -1.21
HPS4-205ENST00000429411 AKAP1Q92667 903 aaKnown RBP eCLIP7.49□□□□□ -1.21
HPS4-205ENST00000429411 SLC17A9Q9BYT1 436 aa7.49□□□□□ -1.21
HPS4-205ENST00000429411 SLC38A1Q9H2H9 487 aa7.49□□□□□ -1.21
HPS4-205ENST00000429411 UBQLN3Q9H347 655 aa7.49□□□□□ -1.21
HPS4-205ENST00000429411 FBXO34Q9NWN3 711 aa7.49□□□□□ -1.21
HPS4-205ENST00000429411 KCMF1Q9P0J7 381 aa7.49□□□□□ -1.21
HPS4-205ENST00000429411 AP1M2Q9Y6Q5 423 aa7.49□□□□□ -1.21
HPS4-205ENST00000429411 ALPK3Q96L96 1907 aa7.49□□□□□ -1.21
HPS4-205ENST00000429411 SPAG17Q6Q759 2223 aa7.49□□□□□ -1.21
HPS4-205ENST00000429411 CENPVL1A0A0U1RR11 272 aa7.49□□□□□ -1.21
HPS4-205ENST00000429411 I3L521 148 aa7.49□□□□□ -1.21
HPS4-205ENST00000429411 GTPBP1O00178 669 aaKnown RBP7.49□□□□□ -1.21
HPS4-205ENST00000429411 CDC42EP2O14613 210 aa7.49□□□□□ -1.21
HPS4-205ENST00000429411 MBTPS2O43462 519 aa7.49□□□□□ -1.21
HPS4-205ENST00000429411 LILRB5O75023 590 aa7.49□□□□□ -1.21
HPS4-205ENST00000429411 KLHL18O94889 574 aa7.49□□□□□ -1.21
HPS4-205ENST00000429411 MT-ND4P03905 459 aa7.49□□□□□ -1.21
HPS4-205ENST00000429411 MT-ND5P03915 603 aa7.49□□□□□ -1.21
HPS4-205ENST00000429411 RLN1P04808 185 aa7.49□□□□□ -1.21
HPS4-205ENST00000429411 ETV6P41212 452 aa7.49□□□□□ -1.21
HPS4-205ENST00000429411 CCR6P51684 374 aa7.49□□□□□ -1.21
HPS4-205ENST00000429411 PCBP4P57723 403 aaKnown RBP7.49□□□□□ -1.21
HPS4-205ENST00000429411 RAB14P61106 215 aa7.49□□□□□ -1.21
HPS4-205ENST00000429411 RPA4Q13156 261 aa7.49□□□□□ -1.21
HPS4-205ENST00000429411 FCN2Q15485 313 aa7.49□□□□□ -1.21
HPS4-205ENST00000429411 MLF2Q15773 248 aaPredicted RBP7.49□□□□□ -1.21
HPS4-205ENST00000429411 C1orf94Q6P1W5 598 aa7.49□□□□□ -1.21
HPS4-205ENST00000429411 NUP54Q7Z3B4 507 aa7.49□□□□□ -1.21
HPS4-205ENST00000429411 CLDN22Q8N7P3 220 aa7.49□□□□□ -1.21
HPS4-205ENST00000429411 TMEM239Q8WW34 195 aa7.49□□□□□ -1.21
HPS4-205ENST00000429411 SMARCD2Q92925 531 aa7.49□□□□□ -1.21
HPS4-205ENST00000429411 DPCDQ9BVM2 203 aaPredicted RBP7.49□□□□□ -1.21
HPS4-205ENST00000429411 TAPBPLQ9BX59 468 aa7.49□□□□□ -1.21
HPS4-205ENST00000429411 CACNG6Q9BXT2 260 aa7.49□□□□□ -1.21
HPS4-205ENST00000429411 SFXN1Q9H9B4 322 aa7.49□□□□□ -1.21
HPS4-205ENST00000429411 FGF22Q9HCT0 170 aa7.49□□□□□ -1.21
HPS4-205ENST00000429411 LHX9Q9NQ69 397 aa7.49□□□□□ -1.21
HPS4-205ENST00000429411 NANSQ9NR45 359 aa7.49□□□□□ -1.21
HPS4-205ENST00000429411 RYDENQ9NUL5 291 aaKnown RBP7.49□□□□□ -1.21
HPS4-205ENST00000429411 RBFOX1Q9NWB1 397 aaKnown RBP7.49□□□□□ -1.21
HPS4-205ENST00000429411 MARK1Q9P0L2 795 aa7.49□□□□□ -1.21
HPS4-205ENST00000429411 MGAT4AQ9UM21 535 aa7.49□□□□□ -1.21
HPS4-205ENST00000429411 PPIEQ9UNP9 301 aaKnown RBP7.49□□□□□ -1.21
HPS4-205ENST00000429411 ICKQ9UPZ9 632 aa7.49□□□□□ -1.21
HPS4-205ENST00000429411 PLXNA4Q9HCM2 1894 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 IQCMA0A1B0GVH7 501 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 POM121BA6NF01 834 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 TEX46H3BTG2 121 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 PLA2G10O15496 165 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 YKT6O15498 198 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 FABP7O15540 132 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 RAD1O60671 282 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 DPM1O60762 260 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 RGS9O75916 674 aaPredicted RBP7.48□□□□□ -1.21
HPS4-205ENST00000429411 DCNP07585 359 aaKnown RBP7.48□□□□□ -1.21
HPS4-205ENST00000429411 HOXC12P31275 282 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 GJA4P35212 333 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 RUNX3Q13761 415 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 CCDC58Q4VC31 144 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 SLC48A1Q6P1K1 146 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 PARM1Q6UWI2 310 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 LYPD8Q6UX82 237 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 LSMEM1Q8N8F7 131 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 TMIEQ8NEW7 156 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 OR5H6Q8NGV6 325 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 SNX18Q96RF0 628 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 MYADMQ96S97 322 aa7.48□□□□□ -1.21
HPS4-205ENST00000429411 C1QTNF7Q9BXJ2 289 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms