RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 PCED1AQ9H1Q7 454 aa12.62□□□□□ -0.39
THBS3-202ENST00000428962 MKKSQ9NPJ1 570 aaPredicted RBP12.62□□□□□ -0.39
THBS3-202ENST00000428962 SOHLH2Q9NX45 425 aa12.62□□□□□ -0.39
THBS3-202ENST00000428962 BABAM2Q9NXR7 383 aa12.62□□□□□ -0.39
THBS3-202ENST00000428962 PRODH2Q9UF12 536 aa12.62□□□□□ -0.39
THBS3-202ENST00000428962 ADAM30Q9UKF2 790 aa12.62□□□□□ -0.39
THBS3-202ENST00000428962 TBC1D24Q9ULP9 559 aa12.62□□□□□ -0.39
THBS3-202ENST00000428962 GRIP1Q9Y3R0 1128 aa12.62□□□□□ -0.39
THBS3-202ENST00000428962 OR10H1Q9Y4A9 318 aa12.62□□□□□ -0.39
THBS3-202ENST00000428962 SPTBN5Q9NRC6 3674 aaKnown RBP12.62□□□□□ -0.39
THBS3-202ENST00000428962 CACNA1IQ9P0X4 2223 aa12.62□□□□□ -0.39
THBS3-202ENST00000428962 VCANP13611 3396 aa12.62□□□□□ -0.39
THBS3-202ENST00000428962 TRAV27A0A087WT01 109 aa12.62□□□□□ -0.39
THBS3-202ENST00000428962 TLCD2A6NGC4 264 aa12.62□□□□□ -0.39
THBS3-202ENST00000428962 NPIPB9F8W1W9 429 aa12.62□□□□□ -0.39
THBS3-202ENST00000428962 TGFBR3LH3BV60 316 aa12.62□□□□□ -0.39
THBS3-202ENST00000428962 TNFRSF10AO00220 468 aa12.62□□□□□ -0.39
THBS3-202ENST00000428962 RNF13O43567 381 aa12.62□□□□□ -0.39
THBS3-202ENST00000428962 CDC123O75794 336 aaPredicted RBP12.62□□□□□ -0.39
THBS3-202ENST00000428962 MT-ND5P03915 603 aa12.62□□□□□ -0.39
THBS3-202ENST00000428962 PEPDP12955 493 aa12.62□□□□□ -0.39
THBS3-202ENST00000428962 IL7P13232 177 aa12.62□□□□□ -0.39
THBS3-202ENST00000428962 NOS3P29474 1203 aa12.62□□□□□ -0.39
THBS3-202ENST00000428962 GPR3P46089 330 aa12.62□□□□□ -0.39
THBS3-202ENST00000428962 FUT7Q11130 342 aa12.62□□□□□ -0.39
THBS3-202ENST00000428962 PTCRAQ6ISU1 281 aaPredicted RBP12.62□□□□□ -0.39
THBS3-202ENST00000428962 NPSR1Q6W5P4 371 aa12.62□□□□□ -0.39
THBS3-202ENST00000428962 CAMKK1Q8N5S9 505 aa12.62□□□□□ -0.39
THBS3-202ENST00000428962 RCBTB1Q8NDN9 531 aa12.62□□□□□ -0.39
THBS3-202ENST00000428962 OR10H4Q8NGA5 316 aa12.62□□□□□ -0.39
THBS3-202ENST00000428962 OR4N2Q8NGD1 307 aa12.62□□□□□ -0.39
THBS3-202ENST00000428962 OR51A7Q8NH64 312 aa12.62□□□□□ -0.39
THBS3-202ENST00000428962 MMABQ96EY8 250 aaPredicted RBP12.62□□□□□ -0.39
THBS3-202ENST00000428962 PTCHD1Q96NR3 888 aa12.62□□□□□ -0.39
THBS3-202ENST00000428962 NDC1Q9BTX1 674 aa12.62□□□□□ -0.39
THBS3-202ENST00000428962 TPSD1Q9BZJ3 242 aa12.62□□□□□ -0.39
THBS3-202ENST00000428962 CHRNA10Q9GZZ6 450 aa12.62□□□□□ -0.39
THBS3-202ENST00000428962 MIR1-1HGQ9H1L0 117 aa12.62□□□□□ -0.39
THBS3-202ENST00000428962 MIXL1Q9H2W2 232 aa12.62□□□□□ -0.39
THBS3-202ENST00000428962 MED20Q9H944 212 aa12.62□□□□□ -0.39
THBS3-202ENST00000428962 PDE7BQ9NP56 450 aa12.62□□□□□ -0.39
THBS3-202ENST00000428962 HAO2Q9NYQ3 351 aa12.62□□□□□ -0.39
THBS3-202ENST00000428962 NPAP1Q9NZP6 1156 aa12.62□□□□□ -0.39
THBS3-202ENST00000428962 SLCO1B1Q9Y6L6 691 aa12.62□□□□□ -0.39
THBS3-202ENST00000428962 CCDC182A6NF36 153 aa12.61□□□□□ -0.39
THBS3-202ENST00000428962 H0YIG0 161 aa12.61□□□□□ -0.39
THBS3-202ENST00000428962 TMCC2O75069 709 aa12.61□□□□□ -0.39
THBS3-202ENST00000428962 PPM1BO75688 479 aa12.61□□□□□ -0.39
THBS3-202ENST00000428962 PPP1R3DO95685 299 aa12.61□□□□□ -0.39
THBS3-202ENST00000428962 F8A1P23610 371 aa12.61□□□□□ -0.39
THBS3-202ENST00000428962 AZGP1P25311 298 aaKnown RBP12.61□□□□□ -0.39
THBS3-202ENST00000428962 SLC16A1P53985 500 aa12.61□□□□□ -0.39
THBS3-202ENST00000428962 MAT1AQ00266 395 aaKnown RBP12.61□□□□□ -0.39
THBS3-202ENST00000428962 CRYZQ08257 329 aaKnown RBP12.61□□□□□ -0.39
THBS3-202ENST00000428962 TDGQ13569 410 aa12.61□□□□□ -0.39
THBS3-202ENST00000428962 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.61□□□□□ -0.39
THBS3-202ENST00000428962 METAP1DQ6UB28 335 aaPredicted RBP12.61□□□□□ -0.39
THBS3-202ENST00000428962 CADM2Q8N3J6 435 aa12.61□□□□□ -0.39
THBS3-202ENST00000428962 FAM160A2Q8N612 972 aaPredicted RBP12.61□□□□□ -0.39
THBS3-202ENST00000428962 TMEM99Q8N816 258 aa12.61□□□□□ -0.39
THBS3-202ENST00000428962 TEAD3Q99594 435 aa12.61□□□□□ -0.39
THBS3-202ENST00000428962 PHF7Q9BWX1 381 aaPredicted RBP12.61□□□□□ -0.39
THBS3-202ENST00000428962 HDHD5Q9BXW7 423 aa12.61□□□□□ -0.39
THBS3-202ENST00000428962 ENKD1Q9H0I2 346 aa12.61□□□□□ -0.39
THBS3-202ENST00000428962 OR10A5Q9H207 317 aa12.61□□□□□ -0.39
THBS3-202ENST00000428962 LMAN1LQ9HAT1 526 aa12.61□□□□□ -0.39
THBS3-202ENST00000428962 MUTYHQ9UIF7 546 aa12.61□□□□□ -0.39
THBS3-202ENST00000428962 ERVK-19Q9WJR5 959 aa12.61□□□□□ -0.39
THBS3-202ENST00000428962 XIRP2A4UGR9 3374 aa12.61□□□□□ -0.39
THBS3-202ENST00000428962 A0A1W2PR77 199 aa12.6□□□□□ -0.39
THBS3-202ENST00000428962 HTR3EA5X5Y0 456 aa12.6□□□□□ -0.39
THBS3-202ENST00000428962 SYNDIG1LA6NDD5 238 aa12.6□□□□□ -0.39
THBS3-202ENST00000428962 SERINC4A6NH21 518 aa12.6□□□□□ -0.39
THBS3-202ENST00000428962 METTL12A8MUP2 240 aa12.6□□□□□ -0.39
THBS3-202ENST00000428962 GTPBP1O00178 669 aaKnown RBP12.6□□□□□ -0.39
THBS3-202ENST00000428962 MBTPS2O43462 519 aa12.6□□□□□ -0.39
THBS3-202ENST00000428962 RFPL3O75679 317 aa12.6□□□□□ -0.39
THBS3-202ENST00000428962 NDUFB2O95178 105 aa12.6□□□□□ -0.39
THBS3-202ENST00000428962 CSTAP01040 98 aa12.6□□□□□ -0.39
THBS3-202ENST00000428962 WNT1P04628 370 aa12.6□□□□□ -0.39
THBS3-202ENST00000428962 IFNA16P05015 189 aa12.6□□□□□ -0.39
THBS3-202ENST00000428962 PTBP1P26599 531 aaKnown RBP eCLIP12.6□□□□□ -0.39
THBS3-202ENST00000428962 GABRA4P48169 554 aa12.6□□□□□ -0.39
THBS3-202ENST00000428962 MTNR1BP49286 362 aa12.6□□□□□ -0.39
THBS3-202ENST00000428962 TMED10P49755 219 aaKnown RBP12.6□□□□□ -0.39
THBS3-202ENST00000428962 PGDP52209 483 aa12.6□□□□□ -0.39
THBS3-202ENST00000428962 TPTEP56180 551 aa12.6□□□□□ -0.39
THBS3-202ENST00000428962 CD300CQ08708 224 aa12.6□□□□□ -0.39
THBS3-202ENST00000428962 ASAH1Q13510 395 aa12.6□□□□□ -0.39
THBS3-202ENST00000428962 GRM7Q14831 915 aa12.6□□□□□ -0.39
THBS3-202ENST00000428962 ZMAT1Q5H9K5 638 aa12.6□□□□□ -0.39
THBS3-202ENST00000428962 LINC00114Q6XXX2 140 aa12.6□□□□□ -0.39
THBS3-202ENST00000428962 SDR16C5Q8N3Y7 309 aa12.6□□□□□ -0.39
THBS3-202ENST00000428962 OR7G1Q8NGA0 311 aa12.6□□□□□ -0.39
THBS3-202ENST00000428962 C16orf52Q8NHV5 167 aa12.6□□□□□ -0.39
THBS3-202ENST00000428962 SGTBQ96EQ0 304 aa12.6□□□□□ -0.39
THBS3-202ENST00000428962 SPACA7Q96KW9 195 aa12.6□□□□□ -0.39
THBS3-202ENST00000428962 NECAB3Q96P71 396 aaPredicted RBP12.6□□□□□ -0.39
THBS3-202ENST00000428962 CCNL2Q96S94 520 aaPredicted RBP12.6□□□□□ -0.39
THBS3-202ENST00000428962 HCAR1Q9BXC0 346 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms