RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 RAC3P60763 192 aa13.76□□□□□ -0.21
SEC13-210ENST00000428626 KRTAP1-1Q07627 177 aa13.76□□□□□ -0.21
SEC13-210ENST00000428626 ARHGAP11BQ3KRB8 267 aa13.76□□□□□ -0.21
SEC13-210ENST00000428626 NCMAPQ5T1S8 102 aa13.76□□□□□ -0.21
SEC13-210ENST00000428626 HEPHL1Q6MZM0 1159 aa13.76□□□□□ -0.21
SEC13-210ENST00000428626 HMGN2P46Q86SG4 172 aa13.76□□□□□ -0.21
SEC13-210ENST00000428626 ANKRD46Q86W74 232 aa13.76□□□□□ -0.21
SEC13-210ENST00000428626 NUDCD3Q8IVD9 361 aa13.76□□□□□ -0.21
SEC13-210ENST00000428626 TMEM171Q8WVE6 324 aa13.76□□□□□ -0.21
SEC13-210ENST00000428626 ZBTB9Q96C00 473 aa13.76□□□□□ -0.21
SEC13-210ENST00000428626 ZG16BQ96DA0 208 aa13.76□□□□□ -0.21
SEC13-210ENST00000428626 SLC35G5Q96KT7 338 aa13.76□□□□□ -0.21
SEC13-210ENST00000428626 SORT1Q99523 831 aa13.76□□□□□ -0.21
SEC13-210ENST00000428626 TMEM109Q9BVC6 243 aa13.76□□□□□ -0.21
SEC13-210ENST00000428626 LAT2Q9GZY6 243 aa13.76□□□□□ -0.21
SEC13-210ENST00000428626 OR51I1Q9H343 314 aa13.76□□□□□ -0.21
SEC13-210ENST00000428626 GP6Q9HCN6 339 aa13.76□□□□□ -0.21
SEC13-210ENST00000428626 NOP53Q9NZM5 478 aaKnown RBP13.76□□□□□ -0.21
SEC13-210ENST00000428626 LAMP3Q9UQV4 416 aa13.76□□□□□ -0.21
SEC13-210ENST00000428626 ALPK2Q86TB3 2170 aa13.76□□□□□ -0.21
SEC13-210ENST00000428626 DPRXA6NFQ7 191 aa13.75□□□□□ -0.21
SEC13-210ENST00000428626 GJE1A6NN92 205 aa13.75□□□□□ -0.21
SEC13-210ENST00000428626 KIAA1324LA8MWY0 1029 aaPredicted RBP13.75□□□□□ -0.21
SEC13-210ENST00000428626 RNASET2O00584 256 aaKnown RBP13.75□□□□□ -0.21
SEC13-210ENST00000428626 ADAM11O75078 769 aa13.75□□□□□ -0.21
SEC13-210ENST00000428626 CYP7B1O75881 506 aa13.75□□□□□ -0.21
SEC13-210ENST00000428626 DANCRP0C864 163 aa13.75□□□□□ -0.21
SEC13-210ENST00000428626 UBTFL6P0CB48 400 aaPredicted RBP13.75□□□□□ -0.21
SEC13-210ENST00000428626 OR12D1P0DN82 309 aa13.75□□□□□ -0.21
SEC13-210ENST00000428626 OR3A2P47893 321 aa13.75□□□□□ -0.21
SEC13-210ENST00000428626 CBFBQ13951 182 aa13.75□□□□□ -0.21
SEC13-210ENST00000428626 MPP2Q14168 576 aa13.75□□□□□ -0.21
SEC13-210ENST00000428626 CHI3L2Q15782 390 aa13.75□□□□□ -0.21
SEC13-210ENST00000428626 TYW3Q6IPR3 259 aaKnown RBP13.75□□□□□ -0.21
SEC13-210ENST00000428626 ADAM5Q6NVV9 412 aa13.75□□□□□ -0.21
SEC13-210ENST00000428626 TNFAIP8L2Q6P589 184 aaPredicted RBP13.75□□□□□ -0.21
SEC13-210ENST00000428626 FAM71CQ8NEG0 241 aa13.75□□□□□ -0.21
SEC13-210ENST00000428626 TOR1AIP2Q8NFQ8 470 aa13.75□□□□□ -0.21
SEC13-210ENST00000428626 OR8J2Q8NGG1 315 aa13.75□□□□□ -0.21
SEC13-210ENST00000428626 MIPOL1Q8TD10 442 aa13.75□□□□□ -0.21
SEC13-210ENST00000428626 RAB8BQ92930 207 aa13.75□□□□□ -0.21
SEC13-210ENST00000428626 KISS1RQ969F8 398 aaPredicted RBP13.75□□□□□ -0.21
SEC13-210ENST00000428626 TRIM44Q96DX7 344 aaPredicted RBP13.75□□□□□ -0.21
SEC13-210ENST00000428626 DNAJA3Q96EY1 480 aa13.75□□□□□ -0.21
SEC13-210ENST00000428626 OR5B2Q96R09 309 aa13.75□□□□□ -0.21
SEC13-210ENST00000428626 HDHD5Q9BXW7 423 aa13.75□□□□□ -0.21
SEC13-210ENST00000428626 FANCFQ9NPI8 374 aa13.75□□□□□ -0.21
SEC13-210ENST00000428626 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.75□□□□□ -0.21
SEC13-210ENST00000428626 V9GYY5 206 aaPredicted RBP13.75□□□□□ -0.21
SEC13-210ENST00000428626 ABCA1O95477 2261 aa13.74□□□□□ -0.21
SEC13-210ENST00000428626 CLDN24A6NM45 220 aa13.74□□□□□ -0.21
SEC13-210ENST00000428626 FAM171A2A8MVW0 826 aa13.74□□□□□ -0.21
SEC13-210ENST00000428626 INAFM1C9JVW0 142 aa13.74□□□□□ -0.21
SEC13-210ENST00000428626 OVOL3O00110 214 aa13.74□□□□□ -0.21
SEC13-210ENST00000428626 CLOCKO15516 846 aa13.74□□□□□ -0.21
SEC13-210ENST00000428626 KIAA0513O60268 411 aa13.74□□□□□ -0.21
SEC13-210ENST00000428626 CYTIPO60759 359 aa13.74□□□□□ -0.21
SEC13-210ENST00000428626 STX11O75558 287 aa13.74□□□□□ -0.21
SEC13-210ENST00000428626 LYZL6O75951 148 aa13.74□□□□□ -0.21
SEC13-210ENST00000428626 SOX30O94993 753 aa13.74□□□□□ -0.21
SEC13-210ENST00000428626 CSTAP01040 98 aa13.74□□□□□ -0.21
SEC13-210ENST00000428626 SERPINE1P05121 402 aa13.74□□□□□ -0.21
SEC13-210ENST00000428626 DHRS4L1P0CG22 281 aa13.74□□□□□ -0.21
SEC13-210ENST00000428626 IL32P24001 234 aa13.74□□□□□ -0.21
SEC13-210ENST00000428626 SLC7A1P30825 629 aa13.74□□□□□ -0.21
SEC13-210ENST00000428626 NTF4P34130 210 aa13.74□□□□□ -0.21
SEC13-210ENST00000428626 PGM1P36871 562 aa13.74□□□□□ -0.21
SEC13-210ENST00000428626 ATP5J2P56134 94 aa13.74□□□□□ -0.21
SEC13-210ENST00000428626 ABCE1P61221 599 aaKnown RBP13.74□□□□□ -0.21
SEC13-210ENST00000428626 BSPH1Q075Z2 132 aa13.74□□□□□ -0.21
SEC13-210ENST00000428626 RASGEF1BQ0VAM2 473 aa13.74□□□□□ -0.21
SEC13-210ENST00000428626 MAD2L1Q13257 205 aaPredicted RBP13.74□□□□□ -0.21
SEC13-210ENST00000428626 ITGADQ13349 1161 aa13.74□□□□□ -0.21
SEC13-210ENST00000428626 TNK1Q13470 666 aa13.74□□□□□ -0.21
SEC13-210ENST00000428626 SMU1Q2TAY7 513 aa13.74□□□□□ -0.21
SEC13-210ENST00000428626 EMBQ6PCB8 327 aa13.74□□□□□ -0.21
SEC13-210ENST00000428626 SLC43A2Q8N370 569 aa13.74□□□□□ -0.21
SEC13-210ENST00000428626 KBTBD8Q8NFY9 601 aa13.74□□□□□ -0.21
SEC13-210ENST00000428626 OR4A15Q8NGL6 344 aa13.74□□□□□ -0.21
SEC13-210ENST00000428626 PIWIL2Q8TC59 973 aaKnown RBP13.74□□□□□ -0.21
SEC13-210ENST00000428626 TEX37Q96LM6 180 aa13.74□□□□□ -0.21
SEC13-210ENST00000428626 TACO1Q9BSH4 297 aaKnown RBP13.74□□□□□ -0.21
SEC13-210ENST00000428626 CXorf56Q9H5V9 222 aa13.74□□□□□ -0.21
SEC13-210ENST00000428626 RNF115Q9Y4L5 304 aa13.74□□□□□ -0.21
SEC13-210ENST00000428626 CR1P17927 2039 aa13.73□□□□□ -0.21
SEC13-210ENST00000428626 DUXAA6NLW8 204 aa13.73□□□□□ -0.21
SEC13-210ENST00000428626 CPSF4O95639 269 aaKnown RBP13.73□□□□□ -0.21
SEC13-210ENST00000428626 AK1P00568 194 aa13.73□□□□□ -0.21
SEC13-210ENST00000428626 FESP07332 822 aa13.73□□□□□ -0.21
SEC13-210ENST00000428626 IGHV1-2P23083 117 aa13.73□□□□□ -0.21
SEC13-210ENST00000428626 DIO1P49895 249 aa13.73□□□□□ -0.21
SEC13-210ENST00000428626 MERTKQ12866 999 aa13.73□□□□□ -0.21
SEC13-210ENST00000428626 CASP8Q14790 479 aa13.73□□□□□ -0.21
SEC13-210ENST00000428626 P2RY6Q15077 328 aa13.73□□□□□ -0.21
SEC13-210ENST00000428626 PGGHGQ32M88 737 aa13.73□□□□□ -0.21
SEC13-210ENST00000428626 SPANXN4Q5MJ08 99 aa13.73□□□□□ -0.21
SEC13-210ENST00000428626 AP1ARQ63HQ0 302 aa13.73□□□□□ -0.21
SEC13-210ENST00000428626 SAXO2Q658L1 398 aa13.73□□□□□ -0.21
SEC13-210ENST00000428626 ABLIM2Q6H8Q1 611 aa13.73□□□□□ -0.21
SEC13-210ENST00000428626 C3orf33Q6P1S2 294 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms