RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 ZNF469Q96JG9 3925 aaPredicted RBP17.12■□□□□ 0.33
COL9A2-204ENST00000427563 PRR14LQ5THK1 2151 aa17.12■□□□□ 0.33
COL9A2-204ENST00000427563 HIVEP1P15822 2718 aa17.12■□□□□ 0.33
COL9A2-204ENST00000427563 F8P00451 2351 aa17.11■□□□□ 0.33
COL9A2-204ENST00000427563 A0A1W2PNR3 127 aa17.11■□□□□ 0.33
COL9A2-204ENST00000427563 HRGP04196 525 aa17.11■□□□□ 0.33
COL9A2-204ENST00000427563 ZCCHC18P0CG32 403 aa17.11■□□□□ 0.33
COL9A2-204ENST00000427563 ETFAP13804 333 aa17.11■□□□□ 0.33
COL9A2-204ENST00000427563 PCYT1AP49585 367 aa17.11■□□□□ 0.33
COL9A2-204ENST00000427563 CARD18P57730 90 aa17.11■□□□□ 0.33
COL9A2-204ENST00000427563 LRRC74AQ0VAA2 488 aa17.11■□□□□ 0.33
COL9A2-204ENST00000427563 SELENBP1Q13228 472 aa17.11■□□□□ 0.33
COL9A2-204ENST00000427563 EIF3MQ7L2H7 374 aaKnown RBP17.11■□□□□ 0.33
COL9A2-204ENST00000427563 MIER2Q8N344 545 aa17.11■□□□□ 0.33
COL9A2-204ENST00000427563 TRIML2Q8N7C3 387 aa17.11■□□□□ 0.33
COL9A2-204ENST00000427563 RNF128Q8TEB7 428 aa17.11■□□□□ 0.33
COL9A2-204ENST00000427563 ABHD3Q8WU67 409 aa17.11■□□□□ 0.33
COL9A2-204ENST00000427563 OIT3Q8WWZ8 545 aa17.11■□□□□ 0.33
COL9A2-204ENST00000427563 CNOT9Q92600 299 aaKnown RBP17.11■□□□□ 0.33
COL9A2-204ENST00000427563 GMPPAQ96IJ6 420 aaPredicted RBP17.11■□□□□ 0.33
COL9A2-204ENST00000427563 DACH2Q96NX9 599 aa17.11■□□□□ 0.33
COL9A2-204ENST00000427563 WFIKKN1Q96NZ8 548 aa17.11■□□□□ 0.33
COL9A2-204ENST00000427563 TRNT1Q96Q11 434 aaKnown RBP17.11■□□□□ 0.33
COL9A2-204ENST00000427563 PRRG4Q9BZD6 226 aa17.11■□□□□ 0.33
COL9A2-204ENST00000427563 PAIP1Q9H074 479 aaKnown RBP17.11■□□□□ 0.33
COL9A2-204ENST00000427563 SLC52A3Q9NQ40 469 aa17.11■□□□□ 0.33
COL9A2-204ENST00000427563 PLSCR4Q9NRQ2 329 aa17.11■□□□□ 0.33
COL9A2-204ENST00000427563 ING1Q9UK53 422 aaPredicted RBP17.11■□□□□ 0.33
COL9A2-204ENST00000427563 MCTS1Q9ULC4 181 aaKnown RBP17.11■□□□□ 0.33
COL9A2-204ENST00000427563 PROCRQ9UNN8 238 aa17.11■□□□□ 0.33
COL9A2-204ENST00000427563 FAM234BA2RU67 622 aa17.1■□□□□ 0.33
COL9A2-204ENST00000427563 AGAP5A6NIR3 686 aa17.1■□□□□ 0.33
COL9A2-204ENST00000427563 AP3D1O14617 1153 aa17.1■□□□□ 0.33
COL9A2-204ENST00000427563 SYNGR4O95473 234 aa17.1■□□□□ 0.33
COL9A2-204ENST00000427563 AGTR1P30556 359 aa17.1■□□□□ 0.33
COL9A2-204ENST00000427563 UGT2B10P36537 528 aa17.1■□□□□ 0.33
COL9A2-204ENST00000427563 MDH1P40925 334 aaKnown RBP17.1■□□□□ 0.33
COL9A2-204ENST00000427563 IST1P53990 364 aa17.1■□□□□ 0.33
COL9A2-204ENST00000427563 KCNJ10P78508 379 aa17.1■□□□□ 0.33
COL9A2-204ENST00000427563 GUCY1A3Q02108 690 aa17.1■□□□□ 0.33
COL9A2-204ENST00000427563 POU4F3Q15319 338 aa17.1■□□□□ 0.33
COL9A2-204ENST00000427563 SLC2A7Q6PXP3 512 aa17.1■□□□□ 0.33
COL9A2-204ENST00000427563 LRRC74BQ6ZQY2 392 aa17.1■□□□□ 0.33
COL9A2-204ENST00000427563 MSANTD1Q6ZTZ1 278 aa17.1■□□□□ 0.33
COL9A2-204ENST00000427563 PLEKHM3Q6ZWE6 761 aa17.1■□□□□ 0.33
COL9A2-204ENST00000427563 OR6K3Q8NGY3 331 aa17.1■□□□□ 0.33
COL9A2-204ENST00000427563 ST8SIA1Q92185 356 aa17.1■□□□□ 0.33
COL9A2-204ENST00000427563 GTF2H4Q92759 462 aa17.1■□□□□ 0.33
COL9A2-204ENST00000427563 PLEKHF2Q9H8W4 249 aa17.1■□□□□ 0.33
COL9A2-204ENST00000427563 TCF7L2Q9NQB0 619 aa17.1■□□□□ 0.33
COL9A2-204ENST00000427563 ACER3Q9NUN7 267 aa17.1■□□□□ 0.33
COL9A2-204ENST00000427563 SLC35A3Q9Y2D2 325 aa17.1■□□□□ 0.33
COL9A2-204ENST00000427563 IGHV3-15A0A0B4J1V0 119 aa17.09■□□□□ 0.33
COL9A2-204ENST00000427563 TGDSO95455 350 aa17.09■□□□□ 0.33
COL9A2-204ENST00000427563 POU2F1P14859 743 aa17.09■□□□□ 0.33
COL9A2-204ENST00000427563 ENPP1P22413 925 aa17.09■□□□□ 0.33
COL9A2-204ENST00000427563 PDSS1Q5T2R2 415 aa17.09■□□□□ 0.33
COL9A2-204ENST00000427563 ZNF550Q7Z398 422 aa17.09■□□□□ 0.33
COL9A2-204ENST00000427563 MSRB3Q8IXL7 192 aa17.09■□□□□ 0.33
COL9A2-204ENST00000427563 CCDC106Q9BWC9 280 aa17.09■□□□□ 0.33
COL9A2-204ENST00000427563 CCDC134Q9H6E4 229 aa17.09■□□□□ 0.33
COL9A2-204ENST00000427563 TPT1P8Q9HAU6 139 aa17.09■□□□□ 0.33
COL9A2-204ENST00000427563 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.09■□□□□ 0.33
COL9A2-204ENST00000427563 KLHL28Q9NXS3 571 aa17.09■□□□□ 0.33
COL9A2-204ENST00000427563 ELOVL5Q9NYP7 299 aa17.09■□□□□ 0.33
COL9A2-204ENST00000427563 LIPT1Q9Y234 373 aa17.09■□□□□ 0.33
COL9A2-204ENST00000427563 EMC9Q9Y3B6 208 aa17.09■□□□□ 0.33
COL9A2-204ENST00000427563 PCDHB14Q9Y5E9 798 aa17.09■□□□□ 0.33
COL9A2-204ENST00000427563 DSPPQ9NZW4 1301 aa17.09■□□□□ 0.33
COL9A2-204ENST00000427563 PRRC2AP48634 2157 aaKnown RBP17.08■□□□□ 0.33
COL9A2-204ENST00000427563 KRT75O95678 551 aa17.08■□□□□ 0.32
COL9A2-204ENST00000427563 PGCP20142 388 aa17.08■□□□□ 0.32
COL9A2-204ENST00000427563 AQP5P55064 265 aa17.08■□□□□ 0.32
COL9A2-204ENST00000427563 TXNL4AP83876 142 aaKnown RBP17.08■□□□□ 0.32
COL9A2-204ENST00000427563 MERTKQ12866 999 aa17.08■□□□□ 0.32
COL9A2-204ENST00000427563 NUFIP2Q7Z417 695 aaKnown RBP17.08■□□□□ 0.32
COL9A2-204ENST00000427563 CPNE4Q96A23 557 aaPredicted RBP17.08■□□□□ 0.32
COL9A2-204ENST00000427563 ITCHQ96J02 903 aa17.08■□□□□ 0.32
COL9A2-204ENST00000427563 CCDC28BQ9BUN5 200 aa17.08■□□□□ 0.32
COL9A2-204ENST00000427563 EXOSC3Q9NQT5 275 aaKnown RBP17.08■□□□□ 0.32
COL9A2-204ENST00000427563 CTPS2Q9NRF8 586 aa17.08■□□□□ 0.32
COL9A2-204ENST00000427563 SLC25A37Q9NYZ2 338 aa17.08■□□□□ 0.32
COL9A2-204ENST00000427563 SLAMF8Q9P0V8 285 aa17.08■□□□□ 0.32
COL9A2-204ENST00000427563 ST6GALNAC2Q9UJ37 374 aa17.08■□□□□ 0.32
COL9A2-204ENST00000427563 VPS13CQ709C8 3753 aa17.08■□□□□ 0.32
COL9A2-204ENST00000427563 GJE1A6NN92 205 aa17.07■□□□□ 0.32
COL9A2-204ENST00000427563 DEFB108AA8MXU0 73 aa17.07■□□□□ 0.32
COL9A2-204ENST00000427563 SMAD9O15198 467 aaKnown RBP17.07■□□□□ 0.32
COL9A2-204ENST00000427563 POLR3GO15318 223 aaPredicted RBP17.07■□□□□ 0.32
COL9A2-204ENST00000427563 PLGP00747 810 aaPredicted RBP17.07■□□□□ 0.32
COL9A2-204ENST00000427563 NUDT7P0C024 238 aa17.07■□□□□ 0.32
COL9A2-204ENST00000427563 TFPTP0C1Z6 253 aa17.07■□□□□ 0.32
COL9A2-204ENST00000427563 NR2F1P10589 423 aa17.07■□□□□ 0.32
COL9A2-204ENST00000427563 LOXP28300 417 aaPredicted RBP17.07■□□□□ 0.32
COL9A2-204ENST00000427563 RYKP34925 604 aa17.07■□□□□ 0.32
COL9A2-204ENST00000427563 CTBP2P56545 445 aa17.07■□□□□ 0.32
COL9A2-204ENST00000427563 HPCAP84074 193 aa17.07■□□□□ 0.32
COL9A2-204ENST00000427563 EXOC3L2Q2M3D2 409 aa17.07■□□□□ 0.32
COL9A2-204ENST00000427563 RPS26P11Q5JNZ5 115 aaPredicted RBP17.07■□□□□ 0.32
COL9A2-204ENST00000427563 C3orf33Q6P1S2 294 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms