RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 OR10H1Q9Y4A9 318 aa1.79□□□□□ -2.12
PTPRC-208ENST00000427110 SMG6Q86US8 1419 aaKnown RBP1.79□□□□□ -2.12
PTPRC-208ENST00000427110 TRAPPC8Q9Y2L5 1435 aa1.79□□□□□ -2.12
PTPRC-208ENST00000427110 MYOM2P54296 1465 aa1.79□□□□□ -2.12
PTPRC-208ENST00000427110 NRXN1Q9ULB1 1477 aa1.79□□□□□ -2.12
PTPRC-208ENST00000427110 EFCAB6Q5THR3 1501 aa1.79□□□□□ -2.12
PTPRC-208ENST00000427110 SETBP1Q9Y6X0 1596 aa1.79□□□□□ -2.12
PTPRC-208ENST00000427110 PIK3C2BO00750 1634 aa1.79□□□□□ -2.12
PTPRC-208ENST00000427110 ABCA6Q8N139 1617 aa1.79□□□□□ -2.12
PTPRC-208ENST00000427110 USP32Q8NFA0 1604 aa1.79□□□□□ -2.12
PTPRC-208ENST00000427110 PPRC1Q5VV67 1664 aaKnown RBP1.79□□□□□ -2.12
PTPRC-208ENST00000427110 RICTORQ6R327 1708 aa1.79□□□□□ -2.12
PTPRC-208ENST00000427110 MYO5BQ9ULV0 1848 aa1.79□□□□□ -2.12
PTPRC-208ENST00000427110 VIRMAQ69YN4 1812 aaKnown RBP1.78□□□□□ -2.12
PTPRC-208ENST00000427110 SIGLEC1Q9BZZ2 1709 aa1.78□□□□□ -2.12
PTPRC-208ENST00000427110 ANKRD26Q9UPS8 1709 aa1.78□□□□□ -2.12
PTPRC-208ENST00000427110 CAMSAP1Q5T5Y3 1602 aa1.78□□□□□ -2.12
PTPRC-208ENST00000427110 GLI2P10070 1586 aa1.78□□□□□ -2.12
PTPRC-208ENST00000427110 HECW2Q9P2P5 1572 aa1.78□□□□□ -2.12
PTPRC-208ENST00000427110 FANCAO15360 1455 aa1.78□□□□□ -2.12
PTPRC-208ENST00000427110 ZNF518AQ6AHZ1 1483 aa1.78□□□□□ -2.12
PTPRC-208ENST00000427110 SCAF11Q99590 1463 aaKnown RBP1.78□□□□□ -2.12
PTPRC-208ENST00000427110 MLH3Q9UHC1 1453 aa1.78□□□□□ -2.12
PTPRC-208ENST00000427110 ZFP92A6NM28 416 aa1.78□□□□□ -2.12
PTPRC-208ENST00000427110 E7ENQ6 273 aa1.78□□□□□ -2.12
PTPRC-208ENST00000427110 PPIAL4DF5H284 164 aa1.78□□□□□ -2.12
PTPRC-208ENST00000427110 G3V4G9 280 aa1.78□□□□□ -2.12
PTPRC-208ENST00000427110 NDC80O14777 642 aa1.78□□□□□ -2.12
PTPRC-208ENST00000427110 CTAGE5O15320 804 aa1.78□□□□□ -2.12
PTPRC-208ENST00000427110 HDAC3O15379 428 aa1.78□□□□□ -2.12
PTPRC-208ENST00000427110 LATO43561 262 aa1.78□□□□□ -2.12
PTPRC-208ENST00000427110 GMFGO60234 142 aa1.78□□□□□ -2.12
PTPRC-208ENST00000427110 TPST2O60704 377 aa1.78□□□□□ -2.12
PTPRC-208ENST00000427110 N4BP1O75113 896 aaKnown RBP1.78□□□□□ -2.12
PTPRC-208ENST00000427110 BCAS1O75363 584 aaPredicted RBP1.78□□□□□ -2.12
PTPRC-208ENST00000427110 GPX5O75715 221 aa1.78□□□□□ -2.12
PTPRC-208ENST00000427110 SERF1AO75920 110 aa1.78□□□□□ -2.12
PTPRC-208ENST00000427110 LRATO95237 230 aa1.78□□□□□ -2.12
PTPRC-208ENST00000427110 OPN1LWP04000 364 aa1.78□□□□□ -2.12
PTPRC-208ENST00000427110 IGF1P05019 195 aa1.78□□□□□ -2.12
PTPRC-208ENST00000427110 UGT2B4P06133 528 aa1.78□□□□□ -2.12
PTPRC-208ENST00000427110 STSP08842 583 aa1.78□□□□□ -2.12
PTPRC-208ENST00000427110 P0C879 139 aa1.78□□□□□ -2.12
PTPRC-208ENST00000427110 RPA2P15927 270 aa1.78□□□□□ -2.12
PTPRC-208ENST00000427110 PGCP20142 388 aa1.78□□□□□ -2.12
PTPRC-208ENST00000427110 ZP3P21754 424 aa1.78□□□□□ -2.12
PTPRC-208ENST00000427110 HNRNPA2B1P22626 353 aaKnown RBP1.78□□□□□ -2.12
PTPRC-208ENST00000427110 PSMA5P28066 241 aa1.78□□□□□ -2.12
PTPRC-208ENST00000427110 HOXD10P28358 340 aa1.78□□□□□ -2.12
PTPRC-208ENST00000427110 NTSP30990 170 aa1.78□□□□□ -2.12
PTPRC-208ENST00000427110 CA8P35219 290 aa1.78□□□□□ -2.12
PTPRC-208ENST00000427110 HPCAL1P37235 193 aa1.78□□□□□ -2.12
PTPRC-208ENST00000427110 STARP49675 285 aa1.78□□□□□ -2.12
PTPRC-208ENST00000427110 ACADVLP49748 655 aa1.78□□□□□ -2.12
PTPRC-208ENST00000427110 PLA2G16P53816 162 aa1.78□□□□□ -2.12
PTPRC-208ENST00000427110 DIO3P55073 304 aa1.78□□□□□ -2.12
PTPRC-208ENST00000427110 MRPS11P82912 194 aaKnown RBP1.78□□□□□ -2.12
PTPRC-208ENST00000427110 RIPPLY1Q0D2K3 151 aa1.78□□□□□ -2.12
PTPRC-208ENST00000427110 SNTB2Q13425 540 aaKnown RBP1.78□□□□□ -2.12
PTPRC-208ENST00000427110 DPYSL3Q14195 570 aa1.78□□□□□ -2.12
PTPRC-208ENST00000427110 PRR4Q16378 134 aa1.78□□□□□ -2.12
PTPRC-208ENST00000427110 KYAT1Q16773 422 aa1.78□□□□□ -2.12
PTPRC-208ENST00000427110 ISXQ2M1V0 245 aa1.78□□□□□ -2.12
PTPRC-208ENST00000427110 NADK2Q4G0N4 442 aa1.78□□□□□ -2.12
PTPRC-208ENST00000427110 SBK1Q52WX2 424 aa1.78□□□□□ -2.12
PTPRC-208ENST00000427110 PRR30Q53SZ7 412 aaPredicted RBP1.78□□□□□ -2.12
PTPRC-208ENST00000427110 RABGAP1LQ5R372 815 aa1.78□□□□□ -2.12
PTPRC-208ENST00000427110 FAM120AOSQ5T036 256 aa1.78□□□□□ -2.12
PTPRC-208ENST00000427110 FAHD2BQ6P2I3 314 aaPredicted RBP1.78□□□□□ -2.12
PTPRC-208ENST00000427110 TRPM8Q7Z2W7 1104 aa1.78□□□□□ -2.12
PTPRC-208ENST00000427110 LINC01561Q8N1V8 128 aa1.78□□□□□ -2.12
PTPRC-208ENST00000427110 C11orf42Q8N5U0 333 aa1.78□□□□□ -2.12
PTPRC-208ENST00000427110 OR10H4Q8NGA5 316 aa1.78□□□□□ -2.12
PTPRC-208ENST00000427110 OR51G2Q8NGK0 314 aa1.78□□□□□ -2.12
PTPRC-208ENST00000427110 AENQ8WTP8 325 aaKnown RBP1.78□□□□□ -2.12
PTPRC-208ENST00000427110 NEIL2Q969S2 332 aa1.78□□□□□ -2.12
PTPRC-208ENST00000427110 FGGYQ96C11 551 aa1.78□□□□□ -2.12
PTPRC-208ENST00000427110 HAVCR1Q96D42 359 aa1.78□□□□□ -2.12
PTPRC-208ENST00000427110 DTNBP1Q96EV8 351 aa1.78□□□□□ -2.12
PTPRC-208ENST00000427110 FAHD2AQ96GK7 314 aa1.78□□□□□ -2.12
PTPRC-208ENST00000427110 ZIM3Q96PE6 472 aa1.78□□□□□ -2.12
PTPRC-208ENST00000427110 CYP2S1Q96SQ9 504 aa1.78□□□□□ -2.12
PTPRC-208ENST00000427110 RIT2Q99578 217 aa1.78□□□□□ -2.12
PTPRC-208ENST00000427110 Q9H3A6 140 aa1.78□□□□□ -2.12
PTPRC-208ENST00000427110 PPDPFQ9H3Y8 114 aa1.78□□□□□ -2.12
PTPRC-208ENST00000427110 FANCFQ9NPI8 374 aa1.78□□□□□ -2.12
PTPRC-208ENST00000427110 AIPL1Q9NZN9 384 aa1.78□□□□□ -2.12
PTPRC-208ENST00000427110 ABCG2Q9UNQ0 655 aa1.78□□□□□ -2.12
PTPRC-208ENST00000427110 GSTK1Q9Y2Q3 226 aa1.78□□□□□ -2.12
PTPRC-208ENST00000427110 PLLPQ9Y342 182 aa1.78□□□□□ -2.12
PTPRC-208ENST00000427110 WDR45Q9Y484 360 aa1.78□□□□□ -2.12
PTPRC-208ENST00000427110 ARHGEF28Q8N1W1 1705 aaKnown RBP1.77□□□□□ -2.13
PTPRC-208ENST00000427110 SHPRHQ149N8 1683 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 QRICH2Q9H0J4 1663 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 FRMPD1Q5SYB0 1578 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 REREQ9P2R6 1566 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 ADGRB3O60242 1522 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 ADGRL1O94910 1474 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 NEO1Q92859 1461 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 BLMP54132 1417 aaPredicted RBP1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms