RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 HTR1EP28566 365 aa22.08■■□□□ 1.13
VEGFA-209ENST00000425836 SRYQ05066 204 aa22.08■■□□□ 1.13
VEGFA-209ENST00000425836 LRRC23Q53EV4 343 aaPredicted RBP22.08■■□□□ 1.13
VEGFA-209ENST00000425836 C6orf89Q6UWU4 347 aa22.08■■□□□ 1.13
VEGFA-209ENST00000425836 PLEKHM3Q6ZWE6 761 aa22.08■■□□□ 1.13
VEGFA-209ENST00000425836 ULK2Q8IYT8 1036 aa22.08■■□□□ 1.13
VEGFA-209ENST00000425836 TNIP2Q8NFZ5 429 aa22.08■■□□□ 1.13
VEGFA-209ENST00000425836 RASSF5Q8WWW0 418 aa22.08■■□□□ 1.13
VEGFA-209ENST00000425836 TP63Q9H3D4 680 aaPredicted RBP22.08■■□□□ 1.13
VEGFA-209ENST00000425836 KLHL28Q9NXS3 571 aa22.08■■□□□ 1.13
VEGFA-209ENST00000425836 POLEQ07864 2286 aa22.08■■□□□ 1.13
VEGFA-209ENST00000425836 TMEM229AB2RXF0 380 aa22.08■■□□□ 1.12
VEGFA-209ENST00000425836 LRRTM2O43300 516 aa22.08■■□□□ 1.12
VEGFA-209ENST00000425836 GGT1P19440 569 aa22.08■■□□□ 1.12
VEGFA-209ENST00000425836 TCN1P20061 433 aaPredicted RBP22.08■■□□□ 1.12
VEGFA-209ENST00000425836 ELK4P28324 431 aa22.08■■□□□ 1.12
VEGFA-209ENST00000425836 ZNF136P52737 540 aa22.08■■□□□ 1.12
VEGFA-209ENST00000425836 CLDN15P56746 228 aa22.08■■□□□ 1.12
VEGFA-209ENST00000425836 CLDN20P56880 219 aa22.08■■□□□ 1.12
VEGFA-209ENST00000425836 RAC1P63000 192 aa22.08■■□□□ 1.12
VEGFA-209ENST00000425836 MERTKQ12866 999 aa22.08■■□□□ 1.12
VEGFA-209ENST00000425836 BNIP1Q12981 228 aa22.08■■□□□ 1.12
VEGFA-209ENST00000425836 CEACAM7Q14002 265 aa22.08■■□□□ 1.12
VEGFA-209ENST00000425836 C4orf17Q53FE4 359 aa22.08■■□□□ 1.12
VEGFA-209ENST00000425836 GRINAQ7Z429 371 aa22.08■■□□□ 1.12
VEGFA-209ENST00000425836 SMPDL3BQ92485 455 aa22.08■■□□□ 1.12
VEGFA-209ENST00000425836 ARHGDIGQ99819 225 aa22.08■■□□□ 1.12
VEGFA-209ENST00000425836 EGFL7Q9UHF1 273 aa22.08■■□□□ 1.12
VEGFA-209ENST00000425836 PRDM4Q9UKN5 801 aa22.08■■□□□ 1.12
VEGFA-209ENST00000425836 FIGNL2A6NMB9 653 aa22.07■■□□□ 1.12
VEGFA-209ENST00000425836 AHRRA9YTQ3 701 aa22.07■■□□□ 1.12
VEGFA-209ENST00000425836 H0YC42 278 aa22.07■■□□□ 1.12
VEGFA-209ENST00000425836 WDR1O75083 606 aa22.07■■□□□ 1.12
VEGFA-209ENST00000425836 FESP07332 822 aa22.07■■□□□ 1.12
VEGFA-209ENST00000425836 NCK1P16333 377 aa22.07■■□□□ 1.12
VEGFA-209ENST00000425836 SLC1A3P43003 542 aa22.07■■□□□ 1.12
VEGFA-209ENST00000425836 SUCLG1P53597 346 aaKnown RBP22.07■■□□□ 1.12
VEGFA-209ENST00000425836 TPD52P55327 224 aaPredicted RBP22.07■■□□□ 1.12
VEGFA-209ENST00000425836 CYBRD1Q53TN4 286 aa22.07■■□□□ 1.12
VEGFA-209ENST00000425836 UBQLNLQ8IYU4 475 aa22.07■■□□□ 1.12
VEGFA-209ENST00000425836 TMEM185BQ9H7F4 350 aa22.07■■□□□ 1.12
VEGFA-209ENST00000425836 EVA1AQ9H8M9 152 aa22.07■■□□□ 1.12
VEGFA-209ENST00000425836 A0A1B0GUH1 482 aa22.06■■□□□ 1.12
VEGFA-209ENST00000425836 M0R3H8 397 aa22.06■■□□□ 1.12
VEGFA-209ENST00000425836 CCL21O00585 134 aa22.06■■□□□ 1.12
VEGFA-209ENST00000425836 OPN1LWP04000 364 aa22.06■■□□□ 1.12
VEGFA-209ENST00000425836 GABRA1P14867 456 aa22.06■■□□□ 1.12
VEGFA-209ENST00000425836 ACVR2AP27037 513 aa22.06■■□□□ 1.12
VEGFA-209ENST00000425836 MSX2P35548 267 aaPredicted RBP22.06■■□□□ 1.12
VEGFA-209ENST00000425836 COPZ1P61923 177 aa22.06■■□□□ 1.12
VEGFA-209ENST00000425836 FXNQ16595 210 aa22.06■■□□□ 1.12
VEGFA-209ENST00000425836 NRF1Q16656 503 aa22.06■■□□□ 1.12
VEGFA-209ENST00000425836 SPATS1Q496A3 300 aa22.06■■□□□ 1.12
VEGFA-209ENST00000425836 RTL6Q6ICC9 239 aa22.06■■□□□ 1.12
VEGFA-209ENST00000425836 GGNQ86UU5 652 aa22.06■■□□□ 1.12
VEGFA-209ENST00000425836 FJX1Q86VR8 437 aa22.06■■□□□ 1.12
VEGFA-209ENST00000425836 LILRA2Q8N149 483 aa22.06■■□□□ 1.12
VEGFA-209ENST00000425836 CADM2Q8N3J6 435 aa22.06■■□□□ 1.12
VEGFA-209ENST00000425836 PRR14Q9BWN1 585 aa22.06■■□□□ 1.12
VEGFA-209ENST00000425836 ADAM19Q9H013 955 aa22.06■■□□□ 1.12
VEGFA-209ENST00000425836 CTPS2Q9NRF8 586 aa22.06■■□□□ 1.12
VEGFA-209ENST00000425836 STOML1Q9UBI4 398 aa22.06■■□□□ 1.12
VEGFA-209ENST00000425836 BAG5Q9UL15 447 aa22.06■■□□□ 1.12
VEGFA-209ENST00000425836 ZGRF1Q86YA3 2104 aa22.06■■□□□ 1.12
VEGFA-209ENST00000425836 DNAJC13O75165 2243 aa22.05■■□□□ 1.12
VEGFA-209ENST00000425836 H0Y3Z8 333 aa22.05■■□□□ 1.12
VEGFA-209ENST00000425836 SEC14L5O43304 696 aa22.05■■□□□ 1.12
VEGFA-209ENST00000425836 FREM3P0C091 2139 aa22.05■■□□□ 1.12
VEGFA-209ENST00000425836 ME2P23368 584 aa22.05■■□□□ 1.12
VEGFA-209ENST00000425836 APOBEC1P41238 236 aaKnown RBP22.05■■□□□ 1.12
VEGFA-209ENST00000425836 RGS8P57771 180 aaPredicted RBP22.05■■□□□ 1.12
VEGFA-209ENST00000425836 GLYATQ6IB77 296 aa22.05■■□□□ 1.12
VEGFA-209ENST00000425836 WBP2NLQ6ICG8 309 aa22.05■■□□□ 1.12
VEGFA-209ENST00000425836 POMZP3Q6PJE2 187 aa22.05■■□□□ 1.12
VEGFA-209ENST00000425836 LACC1Q8IV20 430 aa22.05■■□□□ 1.12
VEGFA-209ENST00000425836 RPRMLQ8N4K4 120 aa22.05■■□□□ 1.12
VEGFA-209ENST00000425836 MEIOBQ8N635 442 aa22.05■■□□□ 1.12
VEGFA-209ENST00000425836 SLC7A6OSQ96CW6 309 aaPredicted RBP22.05■■□□□ 1.12
VEGFA-209ENST00000425836 TUBA1CQ9BQE3 449 aa22.05■■□□□ 1.12
VEGFA-209ENST00000425836 MEMO1Q9Y316 297 aa22.05■■□□□ 1.12
VEGFA-209ENST00000425836 FAM215AQ9Y5M1 114 aa22.05■■□□□ 1.12
VEGFA-209ENST00000425836 RP1L1Q8IWN7 2480 aaPredicted RBP22.05■■□□□ 1.12
VEGFA-209ENST00000425836 E9PLN8 166 aa22.04■■□□□ 1.12
VEGFA-209ENST00000425836 TPST2O60704 377 aa22.04■■□□□ 1.12
VEGFA-209ENST00000425836 SEMA7AO75326 666 aa22.04■■□□□ 1.12
VEGFA-209ENST00000425836 HOXD4P09016 255 aaPredicted RBP22.04■■□□□ 1.12
VEGFA-209ENST00000425836 HTR2AP28223 471 aa22.04■■□□□ 1.12
VEGFA-209ENST00000425836 SHC1P29353 583 aa22.04■■□□□ 1.12
VEGFA-209ENST00000425836 TACR3P29371 465 aa22.04■■□□□ 1.12
VEGFA-209ENST00000425836 PTGER4P35408 488 aa22.04■■□□□ 1.12
VEGFA-209ENST00000425836 HTR3AP46098 478 aa22.04■■□□□ 1.12
VEGFA-209ENST00000425836 KCNC4Q03721 635 aa22.04■■□□□ 1.12
VEGFA-209ENST00000425836 SELENBP1Q13228 472 aa22.04■■□□□ 1.12
VEGFA-209ENST00000425836 ADGRG3Q86Y34 549 aa22.04■■□□□ 1.12
VEGFA-209ENST00000425836 ARHGAP24Q8N264 748 aa22.04■■□□□ 1.12
VEGFA-209ENST00000425836 ATP6V1C2Q8NEY4 427 aa22.04■■□□□ 1.12
VEGFA-209ENST00000425836 OR4D11Q8NGI4 311 aa22.04■■□□□ 1.12
VEGFA-209ENST00000425836 OR6T1Q8NGN1 323 aa22.04■■□□□ 1.12
VEGFA-209ENST00000425836 ZPLD1Q8TCW7 415 aa22.04■■□□□ 1.12
VEGFA-209ENST00000425836 VKORC1Q9BQB6 163 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms