RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 NKAIN4Q8IVV8 208 aa15.28■□□□□ 0.04
CMTM3-202ENST00000424011 FAM26EQ8N5C1 309 aa15.28■□□□□ 0.04
CMTM3-202ENST00000424011 OSTF1Q92882 214 aa15.28■□□□□ 0.04
CMTM3-202ENST00000424011 TMEM80Q96HE8 168 aa15.28■□□□□ 0.04
CMTM3-202ENST00000424011 ZNF559Q9BR84 538 aa15.28■□□□□ 0.04
CMTM3-202ENST00000424011 CHCHD6Q9BRQ6 235 aa15.28■□□□□ 0.04
CMTM3-202ENST00000424011 OR10A5Q9H207 317 aa15.28■□□□□ 0.04
CMTM3-202ENST00000424011 CNIH4Q9P003 139 aa15.28■□□□□ 0.04
CMTM3-202ENST00000424011 NUP50Q9UKX7 468 aa15.28■□□□□ 0.04
CMTM3-202ENST00000424011 PCDHGB6Q9Y5F9 930 aa15.28■□□□□ 0.04
CMTM3-202ENST00000424011 DRD5P21918 477 aa15.28■□□□□ 0.04
CMTM3-202ENST00000424011 EPHA8P29322 1005 aaPredicted RBP15.28■□□□□ 0.04
CMTM3-202ENST00000424011 CSF2RBP32927 897 aa15.28■□□□□ 0.04
CMTM3-202ENST00000424011 CSTF2P33240 577 aaKnown RBP eCLIP15.28■□□□□ 0.04
CMTM3-202ENST00000424011 EFNB1P98172 346 aa15.28■□□□□ 0.04
CMTM3-202ENST00000424011 PLK5Q496M5 336 aa15.28■□□□□ 0.04
CMTM3-202ENST00000424011 FGF11Q92914 225 aa15.28■□□□□ 0.04
CMTM3-202ENST00000424011 FAM46AQ96IP4 442 aaKnown RBP15.28■□□□□ 0.04
CMTM3-202ENST00000424011 PTCHD1Q96NR3 888 aa15.28■□□□□ 0.04
CMTM3-202ENST00000424011 SLC38A2Q96QD8 506 aa15.28■□□□□ 0.04
CMTM3-202ENST00000424011 NXF2Q9GZY0 626 aaKnown RBP15.28■□□□□ 0.04
CMTM3-202ENST00000424011 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.28■□□□□ 0.04
CMTM3-202ENST00000424011 ERVK-19Q9WJR5 959 aa15.28■□□□□ 0.04
CMTM3-202ENST00000424011 HMX3A6NHT5 357 aa15.27■□□□□ 0.04
CMTM3-202ENST00000424011 CTDSP2O14595 271 aa15.27■□□□□ 0.04
CMTM3-202ENST00000424011 RFX3P48380 749 aa15.27■□□□□ 0.04
CMTM3-202ENST00000424011 DSG2Q14126 1118 aa15.27■□□□□ 0.04
CMTM3-202ENST00000424011 NCF4Q15080 339 aa15.27■□□□□ 0.04
CMTM3-202ENST00000424011 OR1Q1Q15612 314 aa15.27■□□□□ 0.04
CMTM3-202ENST00000424011 SSX1Q16384 188 aa15.27■□□□□ 0.04
CMTM3-202ENST00000424011 ZNF613Q6PF04 617 aa15.27■□□□□ 0.04
CMTM3-202ENST00000424011 C19orf48Q6RUI8 117 aa15.27■□□□□ 0.04
CMTM3-202ENST00000424011 ATCAYQ86WG3 371 aa15.27■□□□□ 0.04
CMTM3-202ENST00000424011 OR8D4Q8NGM9 314 aa15.27■□□□□ 0.04
CMTM3-202ENST00000424011 OPALINQ96PE5 141 aa15.27■□□□□ 0.04
CMTM3-202ENST00000424011 NUAK2Q9H093 628 aa15.27■□□□□ 0.04
CMTM3-202ENST00000424011 TMEM27Q9HBJ8 222 aa15.27■□□□□ 0.04
CMTM3-202ENST00000424011 LSM2Q9Y333 95 aaKnown RBP15.27■□□□□ 0.04
CMTM3-202ENST00000424011 ZDBF2Q9HCK1 2354 aa15.27■□□□□ 0.03
CMTM3-202ENST00000424011 NPIPA5A0A0B4J1W7 369 aa15.27■□□□□ 0.03
CMTM3-202ENST00000424011 NPIPA7E9PJI5 369 aa15.27■□□□□ 0.03
CMTM3-202ENST00000424011 DSCR3O14972 297 aa15.27■□□□□ 0.03
CMTM3-202ENST00000424011 CSO75390 466 aaKnown RBP15.27■□□□□ 0.03
CMTM3-202ENST00000424011 NPIPA8P0DM63 369 aa15.27■□□□□ 0.03
CMTM3-202ENST00000424011 IL7P13232 177 aa15.27■□□□□ 0.03
CMTM3-202ENST00000424011 BNC1Q01954 994 aa15.27■□□□□ 0.03
CMTM3-202ENST00000424011 ESCO2Q56NI9 601 aa15.27■□□□□ 0.03
CMTM3-202ENST00000424011 SYT14P1Q58G82 188 aa15.27■□□□□ 0.03
CMTM3-202ENST00000424011 ZNF517Q6ZMY9 492 aaPredicted RBP15.27■□□□□ 0.03
CMTM3-202ENST00000424011 QSOX2Q6ZRP7 698 aa15.27■□□□□ 0.03
CMTM3-202ENST00000424011 NRMQ8IXM6 262 aa15.27■□□□□ 0.03
CMTM3-202ENST00000424011 SLC34A3Q8N130 599 aa15.27■□□□□ 0.03
CMTM3-202ENST00000424011 OR1L3Q8NH93 324 aa15.27■□□□□ 0.03
CMTM3-202ENST00000424011 C16orf52Q8NHV5 167 aa15.27■□□□□ 0.03
CMTM3-202ENST00000424011 TMEM255BQ8WV15 326 aa15.27■□□□□ 0.03
CMTM3-202ENST00000424011 SNAPC3Q92966 411 aa15.27■□□□□ 0.03
CMTM3-202ENST00000424011 MARVELD3Q96A59 401 aa15.27■□□□□ 0.03
CMTM3-202ENST00000424011 CCDC74AQ96AQ1 378 aa15.27■□□□□ 0.03
CMTM3-202ENST00000424011 LRR1Q96L50 414 aa15.27■□□□□ 0.03
CMTM3-202ENST00000424011 PHOX2BQ99453 314 aa15.27■□□□□ 0.03
CMTM3-202ENST00000424011 ZNF768Q9H5H4 540 aaKnown RBP15.27■□□□□ 0.03
CMTM3-202ENST00000424011 LANCL2Q9NS86 450 aa15.27■□□□□ 0.03
CMTM3-202ENST00000424011 PILRBQ9UKJ0 227 aa15.27■□□□□ 0.03
CMTM3-202ENST00000424011 POLHQ9Y253 713 aa15.27■□□□□ 0.03
CMTM3-202ENST00000424011 OR10H1Q9Y4A9 318 aa15.27■□□□□ 0.03
CMTM3-202ENST00000424011 NCOR1O75376 2440 aa15.27■□□□□ 0.03
CMTM3-202ENST00000424011 A0A1B0GTQ1 180 aa15.26■□□□□ 0.03
CMTM3-202ENST00000424011 HRKO00198 91 aa15.26■□□□□ 0.03
CMTM3-202ENST00000424011 MEN1O00255 615 aa15.26■□□□□ 0.03
CMTM3-202ENST00000424011 YKT6O15498 198 aa15.26■□□□□ 0.03
CMTM3-202ENST00000424011 FOLR1P15328 257 aa15.26■□□□□ 0.03
CMTM3-202ENST00000424011 NR0B2Q15466 257 aa15.26■□□□□ 0.03
CMTM3-202ENST00000424011 ZNF141Q15928 474 aa15.26■□□□□ 0.03
CMTM3-202ENST00000424011 SNAPC1Q16533 368 aa15.26■□□□□ 0.03
CMTM3-202ENST00000424011 PDZK1Q5T2W1 519 aa15.26■□□□□ 0.03
CMTM3-202ENST00000424011 MRGPREQ86SM8 312 aa15.26■□□□□ 0.03
CMTM3-202ENST00000424011 CMIPQ8IY22 773 aa15.26■□□□□ 0.03
CMTM3-202ENST00000424011 CLDN22Q8N7P3 220 aa15.26■□□□□ 0.03
CMTM3-202ENST00000424011 ZNF615Q8N8J6 731 aa15.26■□□□□ 0.03
CMTM3-202ENST00000424011 DTWD2Q8NBA8 298 aa15.26■□□□□ 0.03
CMTM3-202ENST00000424011 ZNF582Q96NG8 517 aaPredicted RBP15.26■□□□□ 0.03
CMTM3-202ENST00000424011 TAPBPLQ9BX59 468 aa15.26■□□□□ 0.03
CMTM3-202ENST00000424011 FBXO4Q9UKT5 387 aa15.26■□□□□ 0.03
CMTM3-202ENST00000424011 CBLCQ9ULV8 474 aa15.26■□□□□ 0.03
CMTM3-202ENST00000424011 CFL2Q9Y281 166 aa15.26■□□□□ 0.03
CMTM3-202ENST00000424011 C17orf105B2RV13 164 aa15.26■□□□□ 0.03
CMTM3-202ENST00000424011 ZNF780AO75290 641 aaPredicted RBP15.26■□□□□ 0.03
CMTM3-202ENST00000424011 GKN3PP0CG01 181 aa15.26■□□□□ 0.03
CMTM3-202ENST00000424011 PRG2P13727 222 aa15.26■□□□□ 0.03
CMTM3-202ENST00000424011 HTR2AP28223 471 aa15.26■□□□□ 0.03
CMTM3-202ENST00000424011 GCGRP47871 477 aa15.26■□□□□ 0.03
CMTM3-202ENST00000424011 OR1D4P47884 311 aa15.26■□□□□ 0.03
CMTM3-202ENST00000424011 RHAGQ02094 409 aa15.26■□□□□ 0.03
CMTM3-202ENST00000424011 SQSTM1Q13501 440 aa15.26■□□□□ 0.03
CMTM3-202ENST00000424011 PXDC1Q5TGL8 231 aa15.26■□□□□ 0.03
CMTM3-202ENST00000424011 FAM122CQ6P4D5 195 aa15.26■□□□□ 0.03
CMTM3-202ENST00000424011 TMEM71Q6P5X7 295 aa15.26■□□□□ 0.03
CMTM3-202ENST00000424011 ZC3H14Q6PJT7 736 aaKnown RBP15.26■□□□□ 0.03
CMTM3-202ENST00000424011 PAQR6Q6TCH4 344 aa15.26■□□□□ 0.03
CMTM3-202ENST00000424011 KCTD20Q7Z5Y7 419 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms