RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 NOS3P29474 1203 aa13.29□□□□□ -0.28
MSH5-206ENST00000423982 OR12D2P58182 307 aa13.29□□□□□ -0.28
MSH5-206ENST00000423982 RPS7P62081 194 aaKnown RBP13.29□□□□□ -0.28
MSH5-206ENST00000423982 GRK1Q15835 563 aa13.29□□□□□ -0.28
MSH5-206ENST00000423982 TMEM255AQ5JRV8 349 aa13.29□□□□□ -0.28
MSH5-206ENST00000423982 FAM46CQ5VWP2 391 aa13.29□□□□□ -0.28
MSH5-206ENST00000423982 BHLHB9Q6PI77 547 aa13.29□□□□□ -0.28
MSH5-206ENST00000423982 DGLUCYQ7Z3D6 616 aa13.29□□□□□ -0.28
MSH5-206ENST00000423982 SLC51BQ86UW2 128 aa13.29□□□□□ -0.28
MSH5-206ENST00000423982 MS4A15Q8N5U1 240 aa13.29□□□□□ -0.28
MSH5-206ENST00000423982 TMIEQ8NEW7 156 aa13.29□□□□□ -0.28
MSH5-206ENST00000423982 ABHD4Q8TB40 342 aa13.29□□□□□ -0.28
MSH5-206ENST00000423982 ACOT11Q8WXI4 607 aaPredicted RBP13.29□□□□□ -0.28
MSH5-206ENST00000423982 SLC41A3Q96GZ6 507 aa13.29□□□□□ -0.28
MSH5-206ENST00000423982 ARHGDIGQ99819 225 aa13.29□□□□□ -0.28
MSH5-206ENST00000423982 SYNPO2LQ9H987 977 aa13.29□□□□□ -0.28
MSH5-206ENST00000423982 NUBP2Q9Y5Y2 271 aa13.29□□□□□ -0.28
MSH5-206ENST00000423982 A0A0G2JPF8 293 aa13.29□□□□□ -0.28
MSH5-206ENST00000423982 HNRNPCL2B2RXH8 293 aa13.29□□□□□ -0.28
MSH5-206ENST00000423982 HNRNPCL3B7ZW38 293 aa13.29□□□□□ -0.28
MSH5-206ENST00000423982 TRIM77I1YAP6 450 aa13.29□□□□□ -0.28
MSH5-206ENST00000423982 CASC3O15234 703 aaKnown RBP13.29□□□□□ -0.28
MSH5-206ENST00000423982 H2AFB2P0C5Z0 115 aa13.29□□□□□ -0.28
MSH5-206ENST00000423982 HNRNPCL4P0DMR1 293 aa13.29□□□□□ -0.28
MSH5-206ENST00000423982 GAAP10253 952 aa13.29□□□□□ -0.28
MSH5-206ENST00000423982 ATF1P18846 271 aa13.29□□□□□ -0.28
MSH5-206ENST00000423982 TGM3Q08188 693 aa13.29□□□□□ -0.28
MSH5-206ENST00000423982 COL28A1Q2UY09 1125 aa13.29□□□□□ -0.28
MSH5-206ENST00000423982 NIPAL3Q6P499 406 aa13.29□□□□□ -0.28
MSH5-206ENST00000423982 RTL4Q6ZR62 310 aa13.29□□□□□ -0.28
MSH5-206ENST00000423982 CYB561A3Q8NBI2 242 aa13.29□□□□□ -0.28
MSH5-206ENST00000423982 MARVELD3Q96A59 401 aa13.29□□□□□ -0.28
MSH5-206ENST00000423982 LRIG1Q96JA1 1093 aa13.29□□□□□ -0.28
MSH5-206ENST00000423982 OR2M2Q96R28 347 aa13.29□□□□□ -0.28
MSH5-206ENST00000423982 CLEC4MQ9H2X3 399 aaPredicted RBP13.29□□□□□ -0.28
MSH5-206ENST00000423982 EPHX3Q9H6B9 360 aa13.29□□□□□ -0.28
MSH5-206ENST00000423982 C8orf33Q9H7E9 229 aaPredicted RBP13.29□□□□□ -0.28
MSH5-206ENST00000423982 C20orf141Q9NUB4 165 aa13.29□□□□□ -0.28
MSH5-206ENST00000423982 TP53BP1Q12888 1972 aaPredicted RBP13.28□□□□□ -0.28
MSH5-206ENST00000423982 KLF4O43474 513 aa13.28□□□□□ -0.28
MSH5-206ENST00000423982 RGS11O94810 467 aa13.28□□□□□ -0.28
MSH5-206ENST00000423982 PRG2P13727 222 aa13.28□□□□□ -0.28
MSH5-206ENST00000423982 NDUFV2P19404 249 aa13.28□□□□□ -0.28
MSH5-206ENST00000423982 DRD1P21728 446 aa13.28□□□□□ -0.28
MSH5-206ENST00000423982 NTSP30990 170 aa13.28□□□□□ -0.28
MSH5-206ENST00000423982 SIM1P81133 766 aaPredicted RBP13.28□□□□□ -0.28
MSH5-206ENST00000423982 REEP5Q00765 189 aa13.28□□□□□ -0.28
MSH5-206ENST00000423982 SUZ12Q15022 739 aaKnown RBP13.28□□□□□ -0.28
MSH5-206ENST00000423982 PYHIN1Q6K0P9 492 aa13.28□□□□□ -0.28
MSH5-206ENST00000423982 Q6ZTK2 550 aa13.28□□□□□ -0.28
MSH5-206ENST00000423982 SSX6Q7RTT6 188 aa13.28□□□□□ -0.28
MSH5-206ENST00000423982 DCUN1D3Q8IWE4 304 aa13.28□□□□□ -0.28
MSH5-206ENST00000423982 FTMTQ8N4E7 242 aa13.28□□□□□ -0.28
MSH5-206ENST00000423982 OR5J2Q8NH18 312 aa13.28□□□□□ -0.28
MSH5-206ENST00000423982 OR14C36Q8NHC7 312 aa13.28□□□□□ -0.28
MSH5-206ENST00000423982 PFN4Q8NHR9 129 aa13.28□□□□□ -0.28
MSH5-206ENST00000423982 KISS1RQ969F8 398 aaPredicted RBP13.28□□□□□ -0.28
MSH5-206ENST00000423982 NXPE2Q96DL1 559 aa13.28□□□□□ -0.28
MSH5-206ENST00000423982 C4orf36Q96KX1 117 aa13.28□□□□□ -0.28
MSH5-206ENST00000423982 UBQLN2Q9UHD9 624 aa13.28□□□□□ -0.28
MSH5-206ENST00000423982 MDC1Q14676 2089 aaKnown RBP13.28□□□□□ -0.28
MSH5-206ENST00000423982 MEIKINA0A087WXM9 373 aa13.28□□□□□ -0.28
MSH5-206ENST00000423982 TCRBV21S2A2A0A5A6 115 aa13.28□□□□□ -0.28
MSH5-206ENST00000423982 LRIT2A6NDA9 550 aa13.28□□□□□ -0.28
MSH5-206ENST00000423982 GMDSO60547 372 aa13.28□□□□□ -0.28
MSH5-206ENST00000423982 SULT1A3P0DMM9 295 aa13.28□□□□□ -0.28
MSH5-206ENST00000423982 SULT1A4P0DMN0 295 aa13.28□□□□□ -0.28
MSH5-206ENST00000423982 STAT5AP42229 794 aa13.28□□□□□ -0.28
MSH5-206ENST00000423982 CSNK1G2P78368 415 aa13.28□□□□□ -0.28
MSH5-206ENST00000423982 HSF2Q03933 536 aa13.28□□□□□ -0.28
MSH5-206ENST00000423982 CCINQ13939 588 aa13.28□□□□□ -0.28
MSH5-206ENST00000423982 WDR88Q6ZMY6 472 aa13.28□□□□□ -0.28
MSH5-206ENST00000423982 DDOQ99489 341 aa13.28□□□□□ -0.28
MSH5-206ENST00000423982 MENTQ9BUN1 341 aa13.28□□□□□ -0.28
MSH5-206ENST00000423982 LGR4Q9BXB1 951 aa13.28□□□□□ -0.28
MSH5-206ENST00000423982 SPRTNQ9H040 489 aaPredicted RBP13.28□□□□□ -0.28
MSH5-206ENST00000423982 RSPH9Q9H1X1 276 aaPredicted RBP13.28□□□□□ -0.28
MSH5-206ENST00000423982 OR52D1Q9H346 318 aa13.28□□□□□ -0.28
MSH5-206ENST00000423982 DPEP2Q9H4A9 486 aa13.28□□□□□ -0.28
MSH5-206ENST00000423982 ZDBF2Q9HCK1 2354 aa13.28□□□□□ -0.28
MSH5-206ENST00000423982 TRPM6Q9BX84 2022 aa13.27□□□□□ -0.28
MSH5-206ENST00000423982 IGLON5A6NGN9 336 aa13.27□□□□□ -0.28
MSH5-206ENST00000423982 ERI3O43414 337 aaKnown RBP13.27□□□□□ -0.28
MSH5-206ENST00000423982 DRD2P14416 443 aa13.27□□□□□ -0.28
MSH5-206ENST00000423982 MAP2K6P52564 334 aa13.27□□□□□ -0.28
MSH5-206ENST00000423982 SNRPNP63162 240 aaKnown RBP13.27□□□□□ -0.28
MSH5-206ENST00000423982 ZP2Q05996 745 aa13.27□□□□□ -0.28
MSH5-206ENST00000423982 GNA13Q14344 377 aa13.27□□□□□ -0.28
MSH5-206ENST00000423982 MLF2Q15773 248 aaPredicted RBP13.27□□□□□ -0.28
MSH5-206ENST00000423982 CLLU1Q5K131 121 aa13.27□□□□□ -0.28
MSH5-206ENST00000423982 AGBL4Q5VU57 503 aa13.27□□□□□ -0.28
MSH5-206ENST00000423982 THSD4Q6ZMP0 1018 aa13.27□□□□□ -0.28
MSH5-206ENST00000423982 NLRC3Q7RTR2 1065 aa13.27□□□□□ -0.28
MSH5-206ENST00000423982 RIT1Q92963 219 aa13.27□□□□□ -0.28
MSH5-206ENST00000423982 PTP4A1Q93096 173 aa13.27□□□□□ -0.28
MSH5-206ENST00000423982 TRIM36Q9NQ86 728 aa13.27□□□□□ -0.28
MSH5-206ENST00000423982 C12orf4Q9NQ89 552 aa13.27□□□□□ -0.28
MSH5-206ENST00000423982 MRPL39Q9NYK5 338 aaKnown RBP13.27□□□□□ -0.28
MSH5-206ENST00000423982 AIFM1O95831 613 aa13.27□□□□□ -0.29
MSH5-206ENST00000423982 GKN3PP0CG01 181 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms