RNA–Protein interactions for RNA: ENST00000423327.2

SPC24-201, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

TSL 2

Gene SPC24, Length 840 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-201ENST00000423327 ZBTB18Q99592 522 aa13.81□□□□□ -0.2
SPC24-201ENST00000423327 EBF4Q9BQW3 602 aa13.81□□□□□ -0.2
SPC24-201ENST00000423327 PRRG4Q9BZD6 226 aa13.81□□□□□ -0.2
SPC24-201ENST00000423327 PLSCR4Q9NRQ2 329 aa13.81□□□□□ -0.2
SPC24-201ENST00000423327 ING1Q9UK53 422 aaPredicted RBP13.81□□□□□ -0.2
SPC24-201ENST00000423327 PLEKHA6Q9Y2H5 1048 aa13.81□□□□□ -0.2
SPC24-201ENST00000423327 IGHV3-15A0A0B4J1V0 119 aa13.8□□□□□ -0.2
SPC24-201ENST00000423327 DEFB108AA8MXU0 73 aa13.8□□□□□ -0.2
SPC24-201ENST00000423327 RFXANKO14593 260 aa13.8□□□□□ -0.2
SPC24-201ENST00000423327 IL6P05231 212 aa13.8□□□□□ -0.2
SPC24-201ENST00000423327 H2AFXP16104 143 aaPredicted RBP13.8□□□□□ -0.2
SPC24-201ENST00000423327 ENPP1P22413 925 aa13.8□□□□□ -0.2
SPC24-201ENST00000423327 LOXP28300 417 aaPredicted RBP13.8□□□□□ -0.2
SPC24-201ENST00000423327 ART1P52961 327 aa13.8□□□□□ -0.2
SPC24-201ENST00000423327 GPAT3Q53EU6 434 aa13.8□□□□□ -0.2
SPC24-201ENST00000423327 PAMR1Q6UXH9 720 aa13.8□□□□□ -0.2
SPC24-201ENST00000423327 PLEKHM3Q6ZWE6 761 aa13.8□□□□□ -0.2
SPC24-201ENST00000423327 EIF3MQ7L2H7 374 aaKnown RBP13.8□□□□□ -0.2
SPC24-201ENST00000423327 TRIML2Q8N7C3 387 aa13.8□□□□□ -0.2
SPC24-201ENST00000423327 OIT3Q8WWZ8 545 aa13.8□□□□□ -0.2
SPC24-201ENST00000423327 CNOT9Q92600 299 aaKnown RBP13.8□□□□□ -0.2
SPC24-201ENST00000423327 NINJ1Q92982 152 aa13.8□□□□□ -0.2
SPC24-201ENST00000423327 CPNE4Q96A23 557 aaPredicted RBP13.8□□□□□ -0.2
SPC24-201ENST00000423327 AURKBQ96GD4 344 aaPredicted RBP13.8□□□□□ -0.2
SPC24-201ENST00000423327 TRNT1Q96Q11 434 aaKnown RBP13.8□□□□□ -0.2
SPC24-201ENST00000423327 CXXC4Q9H2H0 198 aa13.8□□□□□ -0.2
SPC24-201ENST00000423327 ELOVL5Q9NYP7 299 aa13.8□□□□□ -0.2
SPC24-201ENST00000423327 EMC9Q9Y3B6 208 aa13.8□□□□□ -0.2
SPC24-201ENST00000423327 ITPR3Q14573 2671 aa13.79□□□□□ -0.2
SPC24-201ENST00000423327 AGAP5A6NIR3 686 aa13.79□□□□□ -0.2
SPC24-201ENST00000423327 GOSR1O95249 250 aa13.79□□□□□ -0.2
SPC24-201ENST00000423327 PLGP00747 810 aaPredicted RBP13.79□□□□□ -0.2
SPC24-201ENST00000423327 ZCCHC18P0CG32 403 aa13.79□□□□□ -0.2
SPC24-201ENST00000423327 CD1EP15812 388 aa13.79□□□□□ -0.2
SPC24-201ENST00000423327 MRPL19P49406 292 aaKnown RBP13.79□□□□□ -0.2
SPC24-201ENST00000423327 KCNJ10P78508 379 aa13.79□□□□□ -0.2
SPC24-201ENST00000423327 LRRC74AQ0VAA2 488 aa13.79□□□□□ -0.2
SPC24-201ENST00000423327 EXOC3L2Q2M3D2 409 aa13.79□□□□□ -0.2
SPC24-201ENST00000423327 PDSS1Q5T2R2 415 aa13.79□□□□□ -0.2
SPC24-201ENST00000423327 C3orf33Q6P1S2 294 aa13.79□□□□□ -0.2
SPC24-201ENST00000423327 STAC2Q6ZMT1 411 aa13.79□□□□□ -0.2
SPC24-201ENST00000423327 LRRC74BQ6ZQY2 392 aa13.79□□□□□ -0.2
SPC24-201ENST00000423327 NUFIP2Q7Z417 695 aaKnown RBP13.79□□□□□ -0.2
SPC24-201ENST00000423327 TUSC5Q8IXB3 177 aa13.79□□□□□ -0.2
SPC24-201ENST00000423327 ST8SIA1Q92185 356 aa13.79□□□□□ -0.2
SPC24-201ENST00000423327 CCDC106Q9BWC9 280 aa13.79□□□□□ -0.2
SPC24-201ENST00000423327 EXOSC3Q9NQT5 275 aaKnown RBP13.79□□□□□ -0.2
SPC24-201ENST00000423327 CTPS2Q9NRF8 586 aa13.79□□□□□ -0.2
SPC24-201ENST00000423327 ACER3Q9NUN7 267 aa13.79□□□□□ -0.2
SPC24-201ENST00000423327 C6orf203Q9P0P8 240 aaPredicted RBP13.79□□□□□ -0.2
SPC24-201ENST00000423327 SLC35A3Q9Y2D2 325 aa13.79□□□□□ -0.2
SPC24-201ENST00000423327 RAI1Q7Z5J4 1906 aaPredicted RBP13.79□□□□□ -0.2
SPC24-201ENST00000423327 DSPPQ9NZW4 1301 aa13.79□□□□□ -0.2
SPC24-201ENST00000423327 ROS1P08922 2347 aa13.78□□□□□ -0.2
SPC24-201ENST00000423327 C16orf97H3BN30 126 aa13.78□□□□□ -0.2
SPC24-201ENST00000423327 AP3D1O14617 1153 aa13.78□□□□□ -0.2
SPC24-201ENST00000423327 SMAD9O15198 467 aaKnown RBP13.78□□□□□ -0.2
SPC24-201ENST00000423327 SASH3O75995 380 aa13.78□□□□□ -0.2
SPC24-201ENST00000423327 ATE1O95260 518 aa13.78□□□□□ -0.2
SPC24-201ENST00000423327 THBDP07204 575 aa13.78□□□□□ -0.2
SPC24-201ENST00000423327 ETFAP13804 333 aa13.78□□□□□ -0.2
SPC24-201ENST00000423327 PGCP20142 388 aa13.78□□□□□ -0.2
SPC24-201ENST00000423327 CRYGSP22914 178 aa13.78□□□□□ -0.2
SPC24-201ENST00000423327 EDNRAP25101 427 aa13.78□□□□□ -0.2
SPC24-201ENST00000423327 RYKP34925 604 aa13.78□□□□□ -0.2
SPC24-201ENST00000423327 KCNJ5P48544 419 aa13.78□□□□□ -0.2
SPC24-201ENST00000423327 IDH3AP50213 366 aa13.78□□□□□ -0.2
SPC24-201ENST00000423327 POLR2JP52435 117 aaKnown RBP13.78□□□□□ -0.2
SPC24-201ENST00000423327 CTBP2P56545 445 aa13.78□□□□□ -0.2
SPC24-201ENST00000423327 HPCAP84074 193 aa13.78□□□□□ -0.2
SPC24-201ENST00000423327 MERTKQ12866 999 aa13.78□□□□□ -0.2
SPC24-201ENST00000423327 ANKRD34AQ69YU3 496 aa13.78□□□□□ -0.2
SPC24-201ENST00000423327 SLC2A7Q6PXP3 512 aa13.78□□□□□ -0.2
SPC24-201ENST00000423327 TFAP2EQ6VUC0 442 aa13.78□□□□□ -0.2
SPC24-201ENST00000423327 MSANTD1Q6ZTZ1 278 aa13.78□□□□□ -0.2
SPC24-201ENST00000423327 FCRLAQ7L513 359 aa13.78□□□□□ -0.2
SPC24-201ENST00000423327 FUNDC1Q8IVP5 155 aa13.78□□□□□ -0.2
SPC24-201ENST00000423327 MIER2Q8N344 545 aa13.78□□□□□ -0.2
SPC24-201ENST00000423327 LRRC8CQ8TDW0 803 aa13.78□□□□□ -0.2
SPC24-201ENST00000423327 GTF2H4Q92759 462 aa13.78□□□□□ -0.2
SPC24-201ENST00000423327 HS3ST6Q96QI5 342 aa13.78□□□□□ -0.2
SPC24-201ENST00000423327 PSD2Q9BQI7 771 aa13.78□□□□□ -0.2
SPC24-201ENST00000423327 SLC39A3Q9BRY0 314 aa13.78□□□□□ -0.2
SPC24-201ENST00000423327 PAIP1Q9H074 479 aaKnown RBP13.78□□□□□ -0.2
SPC24-201ENST00000423327 C12orf49Q9H741 205 aa13.78□□□□□ -0.2
SPC24-201ENST00000423327 SLC52A3Q9NQ40 469 aa13.78□□□□□ -0.2
SPC24-201ENST00000423327 TCF7L2Q9NQB0 619 aa13.78□□□□□ -0.2
SPC24-201ENST00000423327 GLRX2Q9NS18 164 aa13.78□□□□□ -0.2
SPC24-201ENST00000423327 KLHL13Q9P2N7 655 aa13.78□□□□□ -0.2
SPC24-201ENST00000423327 NDRG3Q9UGV2 375 aa13.78□□□□□ -0.2
SPC24-201ENST00000423327 FAM234BA2RU67 622 aa13.77□□□□□ -0.21
SPC24-201ENST00000423327 GJE1A6NN92 205 aa13.77□□□□□ -0.21
SPC24-201ENST00000423327 GCM2O75603 506 aaPredicted RBP13.77□□□□□ -0.21
SPC24-201ENST00000423327 RAC3P60763 192 aa13.77□□□□□ -0.21
SPC24-201ENST00000423327 TXNL4AP83876 142 aaKnown RBP13.77□□□□□ -0.21
SPC24-201ENST00000423327 SYT14P1Q58G82 188 aa13.77□□□□□ -0.21
SPC24-201ENST00000423327 RPS26P11Q5JNZ5 115 aaPredicted RBP13.77□□□□□ -0.21
SPC24-201ENST00000423327 MSRB3Q8IXL7 192 aa13.77□□□□□ -0.21
SPC24-201ENST00000423327 DNAJA3Q96EY1 480 aa13.77□□□□□ -0.21
SPC24-201ENST00000423327 ZC3HAV1LQ96H79 300 aaKnown RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms