RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 INPP5KQ9BT40 448 aa13.57□□□□□ -0.24
USB1-202ENST00000423271 NMUR2Q9GZQ4 415 aa13.57□□□□□ -0.24
USB1-202ENST00000423271 COQ10BQ9H8M1 238 aa13.57□□□□□ -0.24
USB1-202ENST00000423271 BTNL2Q9UIR0 455 aa13.57□□□□□ -0.24
USB1-202ENST00000423271 PCDHGB4Q9UN71 923 aa13.57□□□□□ -0.24
USB1-202ENST00000423271 SERINC4A6NH21 518 aa13.56□□□□□ -0.24
USB1-202ENST00000423271 SOX30O94993 753 aa13.56□□□□□ -0.24
USB1-202ENST00000423271 NTN1O95631 604 aa13.56□□□□□ -0.24
USB1-202ENST00000423271 KLK2P20151 261 aa13.56□□□□□ -0.24
USB1-202ENST00000423271 ADH6P28332 368 aa13.56□□□□□ -0.24
USB1-202ENST00000423271 AGTR1P30556 359 aa13.56□□□□□ -0.24
USB1-202ENST00000423271 CDKN2CP42773 168 aa13.56□□□□□ -0.24
USB1-202ENST00000423271 CARD18P57730 90 aa13.56□□□□□ -0.24
USB1-202ENST00000423271 FUT5Q11128 374 aa13.56□□□□□ -0.24
USB1-202ENST00000423271 FOXD4Q12950 439 aaPredicted RBP13.56□□□□□ -0.24
USB1-202ENST00000423271 SKP2Q13309 424 aa13.56□□□□□ -0.24
USB1-202ENST00000423271 QPRTQ15274 297 aa13.56□□□□□ -0.24
USB1-202ENST00000423271 PDSS1Q5T2R2 415 aa13.56□□□□□ -0.24
USB1-202ENST00000423271 TNFAIP8L2Q6P589 184 aaPredicted RBP13.56□□□□□ -0.24
USB1-202ENST00000423271 ATP6V1C2Q8NEY4 427 aa13.56□□□□□ -0.24
USB1-202ENST00000423271 MIPOL1Q8TD10 442 aa13.56□□□□□ -0.24
USB1-202ENST00000423271 ABHD3Q8WU67 409 aa13.56□□□□□ -0.24
USB1-202ENST00000423271 RAB8BQ92930 207 aa13.56□□□□□ -0.24
USB1-202ENST00000423271 VPS33AQ96AX1 596 aa13.56□□□□□ -0.24
USB1-202ENST00000423271 HS3ST6Q96QI5 342 aa13.56□□□□□ -0.24
USB1-202ENST00000423271 ZNF350Q9GZX5 532 aa13.56□□□□□ -0.24
USB1-202ENST00000423271 ZNF385DQ9H6B1 395 aa13.56□□□□□ -0.24
USB1-202ENST00000423271 C12orf49Q9H741 205 aa13.56□□□□□ -0.24
USB1-202ENST00000423271 PLSCR4Q9NRQ2 329 aa13.56□□□□□ -0.24
USB1-202ENST00000423271 ZNF226Q9NYT6 803 aa13.56□□□□□ -0.24
USB1-202ENST00000423271 KLHL14Q9P2G3 628 aa13.56□□□□□ -0.24
USB1-202ENST00000423271 MKLN1Q9UL63 735 aa13.56□□□□□ -0.24
USB1-202ENST00000423271 TRIM33Q9UPN9 1127 aa13.56□□□□□ -0.24
USB1-202ENST00000423271 GPC6Q9Y625 555 aaPredicted RBP13.56□□□□□ -0.24
USB1-202ENST00000423271 FREM1Q5H8C1 2179 aa13.56□□□□□ -0.24
USB1-202ENST00000423271 DUXAA6NLW8 204 aa13.55□□□□□ -0.24
USB1-202ENST00000423271 ZNF264O43296 627 aa13.55□□□□□ -0.24
USB1-202ENST00000423271 EIF4E2O60573 245 aaKnown RBP13.55□□□□□ -0.24
USB1-202ENST00000423271 BCAS1O75363 584 aaPredicted RBP13.55□□□□□ -0.24
USB1-202ENST00000423271 STX11O75558 287 aa13.55□□□□□ -0.24
USB1-202ENST00000423271 UGT2B17O75795 530 aa13.55□□□□□ -0.24
USB1-202ENST00000423271 CYP7B1O75881 506 aa13.55□□□□□ -0.24
USB1-202ENST00000423271 AK1P00568 194 aa13.55□□□□□ -0.24
USB1-202ENST00000423271 THBDP07204 575 aa13.55□□□□□ -0.24
USB1-202ENST00000423271 OR12D1P0DN82 309 aa13.55□□□□□ -0.24
USB1-202ENST00000423271 UQCRC2P22695 453 aa13.55□□□□□ -0.24
USB1-202ENST00000423271 LOXP28300 417 aaPredicted RBP13.55□□□□□ -0.24
USB1-202ENST00000423271 LSP1P33241 339 aa13.55□□□□□ -0.24
USB1-202ENST00000423271 SEC24CP53992 1094 aa13.55□□□□□ -0.24
USB1-202ENST00000423271 GNGT1P63211 74 aa13.55□□□□□ -0.24
USB1-202ENST00000423271 ADAM8P78325 824 aa13.55□□□□□ -0.24
USB1-202ENST00000423271 IRX1P78414 480 aaPredicted RBP13.55□□□□□ -0.24
USB1-202ENST00000423271 ZNF141Q15928 474 aa13.55□□□□□ -0.24
USB1-202ENST00000423271 MAPK14Q16539 360 aa13.55□□□□□ -0.24
USB1-202ENST00000423271 ARHGAP11BQ3KRB8 267 aa13.55□□□□□ -0.24
USB1-202ENST00000423271 TMEM176BQ3YBM2 270 aaPredicted RBP13.55□□□□□ -0.24
USB1-202ENST00000423271 AGKQ53H12 422 aa13.55□□□□□ -0.24
USB1-202ENST00000423271 SAXO2Q658L1 398 aa13.55□□□□□ -0.24
USB1-202ENST00000423271 HEPHL1Q6MZM0 1159 aa13.55□□□□□ -0.24
USB1-202ENST00000423271 STAC2Q6ZMT1 411 aa13.55□□□□□ -0.24
USB1-202ENST00000423271 C16orf62Q7Z3J2 963 aa13.55□□□□□ -0.24
USB1-202ENST00000423271 TOR1AIP2Q8NFQ8 470 aa13.55□□□□□ -0.24
USB1-202ENST00000423271 OR5W2Q8NH69 310 aa13.55□□□□□ -0.24
USB1-202ENST00000423271 RNF128Q8TEB7 428 aa13.55□□□□□ -0.24
USB1-202ENST00000423271 ZFP90Q8TF47 636 aa13.55□□□□□ -0.24
USB1-202ENST00000423271 MRGPRX4Q96LA9 322 aa13.55□□□□□ -0.24
USB1-202ENST00000423271 PANX1Q96RD7 426 aa13.55□□□□□ -0.24
USB1-202ENST00000423271 QRSL1Q9H0R6 528 aaKnown RBP13.55□□□□□ -0.24
USB1-202ENST00000423271 GLRX2Q9NS18 164 aa13.55□□□□□ -0.24
USB1-202ENST00000423271 CCDC167Q9P0B6 97 aa13.55□□□□□ -0.24
USB1-202ENST00000423271 ARID1AO14497 2285 aa13.54□□□□□ -0.24
USB1-202ENST00000423271 A0A1W2PNR3 127 aa13.54□□□□□ -0.24
USB1-202ENST00000423271 CCDC154A6NI56 674 aa13.54□□□□□ -0.24
USB1-202ENST00000423271 ETV2O00321 342 aaPredicted RBP13.54□□□□□ -0.24
USB1-202ENST00000423271 NR5A2O00482 541 aa13.54□□□□□ -0.24
USB1-202ENST00000423271 RFXANKO14593 260 aa13.54□□□□□ -0.24
USB1-202ENST00000423271 KIAA0513O60268 411 aa13.54□□□□□ -0.24
USB1-202ENST00000423271 H6PDO95479 791 aa13.54□□□□□ -0.24
USB1-202ENST00000423271 GSNP06396 782 aa13.54□□□□□ -0.24
USB1-202ENST00000423271 LRRC74AQ0VAA2 488 aa13.54□□□□□ -0.24
USB1-202ENST00000423271 SELENBP1Q13228 472 aa13.54□□□□□ -0.24
USB1-202ENST00000423271 CBFBQ13951 182 aa13.54□□□□□ -0.24
USB1-202ENST00000423271 SLC25A53Q5H9E4 307 aa13.54□□□□□ -0.24
USB1-202ENST00000423271 METTL21CQ5VZV1 264 aa13.54□□□□□ -0.24
USB1-202ENST00000423271 TYW3Q6IPR3 259 aaKnown RBP13.54□□□□□ -0.24
USB1-202ENST00000423271 BLOC1S3Q6QNY0 202 aa13.54□□□□□ -0.24
USB1-202ENST00000423271 DNAJC14Q6Y2X3 702 aaPredicted RBP13.54□□□□□ -0.24
USB1-202ENST00000423271 MSANTD1Q6ZTZ1 278 aa13.54□□□□□ -0.24
USB1-202ENST00000423271 HMGN2P46Q86SG4 172 aa13.54□□□□□ -0.24
USB1-202ENST00000423271 LSRQ86X29 649 aaPredicted RBP13.54□□□□□ -0.24
USB1-202ENST00000423271 KRTAP1-3Q8IUG1 177 aa13.54□□□□□ -0.24
USB1-202ENST00000423271 WFDC11Q8NEX6 87 aa13.54□□□□□ -0.24
USB1-202ENST00000423271 C10orf82Q8WW14 230 aa13.54□□□□□ -0.24
USB1-202ENST00000423271 XAGE5Q8WWM1 108 aa13.54□□□□□ -0.24
USB1-202ENST00000423271 CPNE4Q96A23 557 aaPredicted RBP13.54□□□□□ -0.24
USB1-202ENST00000423271 THUMPD3Q9BV44 507 aaKnown RBP13.54□□□□□ -0.24
USB1-202ENST00000423271 LAT2Q9GZY6 243 aa13.54□□□□□ -0.24
USB1-202ENST00000423271 SLC6A13Q9NSD5 602 aa13.54□□□□□ -0.24
USB1-202ENST00000423271 EXD2Q9NVH0 621 aa13.54□□□□□ -0.24
USB1-202ENST00000423271 FAM53CQ9NYF3 392 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 122.9 ms