RNA–Protein interactions for RNA: ENST00000420058.1

NFE4-201, Transcript of nuclear factor, erythroid 4, humanhuman

TSL 1 (best)

Gene NFE4, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4-201ENST00000420058 TMEM108Q6UXF1 575 aa12.5□□□□□ -0.41
NFE4-201ENST00000420058 ZYG11AQ6WRX3 759 aa12.5□□□□□ -0.41
NFE4-201ENST00000420058 SZRD1Q7Z422 152 aa12.5□□□□□ -0.41
NFE4-201ENST00000420058 FBXL14Q8N1E6 418 aa12.5□□□□□ -0.41
NFE4-201ENST00000420058 OR5W2Q8NH69 310 aa12.5□□□□□ -0.41
NFE4-201ENST00000420058 ZFP28Q8NHY6 868 aa12.5□□□□□ -0.41
NFE4-201ENST00000420058 MSI2Q96DH6 328 aaKnown RBP12.5□□□□□ -0.41
NFE4-201ENST00000420058 MUS81Q96NY9 551 aa12.5□□□□□ -0.41
NFE4-201ENST00000420058 FMO2Q99518 471 aa12.5□□□□□ -0.41
NFE4-201ENST00000420058 CCT7Q99832 543 aa12.5□□□□□ -0.41
NFE4-201ENST00000420058 PRR14Q9BWN1 585 aa12.5□□□□□ -0.41
NFE4-201ENST00000420058 AMBRA1Q9C0C7 1298 aa12.5□□□□□ -0.41
NFE4-201ENST00000420058 QRSL1Q9H0R6 528 aaKnown RBP12.5□□□□□ -0.41
NFE4-201ENST00000420058 GPATCH2Q9NW75 528 aa12.5□□□□□ -0.41
NFE4-201ENST00000420058 KCNE5Q9UJ90 142 aa12.5□□□□□ -0.41
NFE4-201ENST00000420058 MGAT4BQ9UQ53 548 aa12.5□□□□□ -0.41
NFE4-201ENST00000420058 EXOC1LA0A1B0GW35 172 aa12.49□□□□□ -0.41
NFE4-201ENST00000420058 ZNF716A6NP11 495 aa12.49□□□□□ -0.41
NFE4-201ENST00000420058 PDLIM1O00151 329 aa12.49□□□□□ -0.41
NFE4-201ENST00000420058 RAD51DO75771 328 aa12.49□□□□□ -0.41
NFE4-201ENST00000420058 GSTA1P08263 222 aa12.49□□□□□ -0.41
NFE4-201ENST00000420058 DHRS4L1P0CG22 281 aa12.49□□□□□ -0.41
NFE4-201ENST00000420058 UROSP10746 265 aa12.49□□□□□ -0.41
NFE4-201ENST00000420058 SRD5A1P18405 259 aa12.49□□□□□ -0.41
NFE4-201ENST00000420058 SLC7A1P30825 629 aa12.49□□□□□ -0.41
NFE4-201ENST00000420058 CHRNEQ04844 493 aa12.49□□□□□ -0.41
NFE4-201ENST00000420058 GABRA6Q16445 453 aa12.49□□□□□ -0.41
NFE4-201ENST00000420058 TIGD2Q4W5G0 525 aa12.49□□□□□ -0.41
NFE4-201ENST00000420058 ABLIM2Q6H8Q1 611 aa12.49□□□□□ -0.41
NFE4-201ENST00000420058 ZNF544Q6NX49 715 aa12.49□□□□□ -0.41
NFE4-201ENST00000420058 CDC73Q6P1J9 531 aa12.49□□□□□ -0.41
NFE4-201ENST00000420058 TMPPEQ6ZT21 453 aa12.49□□□□□ -0.41
NFE4-201ENST00000420058 LSRQ86X29 649 aaPredicted RBP12.49□□□□□ -0.41
NFE4-201ENST00000420058 ZNF100Q8IYN0 542 aa12.49□□□□□ -0.41
NFE4-201ENST00000420058 PSMA8Q8TAA3 256 aa12.49□□□□□ -0.41
NFE4-201ENST00000420058 IFT81Q8WYA0 676 aa12.49□□□□□ -0.41
NFE4-201ENST00000420058 JADE3Q92613 823 aa12.49□□□□□ -0.41
NFE4-201ENST00000420058 OR5B2Q96R09 309 aa12.49□□□□□ -0.41
NFE4-201ENST00000420058 INPP5KQ9BT40 448 aa12.49□□□□□ -0.41
NFE4-201ENST00000420058 C1QTNF6Q9BXI9 259 aa12.49□□□□□ -0.41
NFE4-201ENST00000420058 HOXD1Q9GZZ0 328 aa12.49□□□□□ -0.41
NFE4-201ENST00000420058 TSPYL1Q9H0U9 437 aa12.49□□□□□ -0.41
NFE4-201ENST00000420058 ZCCHC3Q9NUD5 404 aaKnown RBP12.49□□□□□ -0.41
NFE4-201ENST00000420058 DTNAQ9Y4J8 743 aa12.49□□□□□ -0.41
NFE4-201ENST00000420058 CENPVL1A0A0U1RR11 272 aa12.48□□□□□ -0.41
NFE4-201ENST00000420058 A0A1W2PPM1 405 aa12.48□□□□□ -0.41
NFE4-201ENST00000420058 GTPBP1O00178 669 aaKnown RBP12.48□□□□□ -0.41
NFE4-201ENST00000420058 EIF4E2O60573 245 aaKnown RBP12.48□□□□□ -0.41
NFE4-201ENST00000420058 PROCP04070 461 aa12.48□□□□□ -0.41
NFE4-201ENST00000420058 LAMP1P11279 417 aa12.48□□□□□ -0.41
NFE4-201ENST00000420058 BCKDHAP12694 445 aa12.48□□□□□ -0.41
NFE4-201ENST00000420058 DIO1P49895 249 aa12.48□□□□□ -0.41
NFE4-201ENST00000420058 DNAJB13P59910 316 aa12.48□□□□□ -0.41
NFE4-201ENST00000420058 PDK3Q15120 406 aa12.48□□□□□ -0.41
NFE4-201ENST00000420058 SWI5Q1ZZU3 235 aa12.48□□□□□ -0.41
NFE4-201ENST00000420058 DCST2Q5T1A1 773 aa12.48□□□□□ -0.41
NFE4-201ENST00000420058 NOA1Q8NC60 698 aaKnown RBP12.48□□□□□ -0.41
NFE4-201ENST00000420058 ACMSDQ8TDX5 336 aa12.48□□□□□ -0.41
NFE4-201ENST00000420058 IQCGQ9H095 443 aaKnown RBP12.48□□□□□ -0.41
NFE4-201ENST00000420058 C12orf65Q9H3J6 166 aaKnown RBP12.48□□□□□ -0.41
NFE4-201ENST00000420058 ATP6V1HQ9UI12 483 aa12.48□□□□□ -0.41
NFE4-201ENST00000420058 IGHV4-61A0A0C4DH41 118 aa12.47□□□□□ -0.41
NFE4-201ENST00000420058 LOC100289279A0A1B0GTE1 492 aa12.47□□□□□ -0.41
NFE4-201ENST00000420058 H3BQF6 201 aa12.47□□□□□ -0.41
NFE4-201ENST00000420058 M0R1B8 84 aa12.47□□□□□ -0.41
NFE4-201ENST00000420058 SLC28A1O00337 649 aa12.47□□□□□ -0.41
NFE4-201ENST00000420058 LSM1O15116 133 aaKnown RBP12.47□□□□□ -0.41
NFE4-201ENST00000420058 ZNF264O43296 627 aa12.47□□□□□ -0.41
NFE4-201ENST00000420058 ITGA5P08648 1049 aa12.47□□□□□ -0.41
NFE4-201ENST00000420058 ABHD2P08910 425 aa12.47□□□□□ -0.41
NFE4-201ENST00000420058 CCT3P49368 545 aaKnown RBP12.47□□□□□ -0.41
NFE4-201ENST00000420058 GZMKP49863 264 aa12.47□□□□□ -0.41
NFE4-201ENST00000420058 SESN3P58005 492 aa12.47□□□□□ -0.41
NFE4-201ENST00000420058 SLC25A3Q00325 362 aa12.47□□□□□ -0.41
NFE4-201ENST00000420058 SKP2Q13309 424 aa12.47□□□□□ -0.41
NFE4-201ENST00000420058 RNF165Q6ZSG1 346 aa12.47□□□□□ -0.41
NFE4-201ENST00000420058 MTDHQ86UE4 582 aaKnown RBP12.47□□□□□ -0.41
NFE4-201ENST00000420058 ZNF527Q8NB42 609 aa12.47□□□□□ -0.41
NFE4-201ENST00000420058 OR7A2PQ8NGA2 310 aa12.47□□□□□ -0.41
NFE4-201ENST00000420058 RFWD2Q8NHY2 731 aa12.47□□□□□ -0.41
NFE4-201ENST00000420058 MTERF3Q96E29 417 aa12.47□□□□□ -0.41
NFE4-201ENST00000420058 CCDC126Q96EE4 140 aa12.47□□□□□ -0.41
NFE4-201ENST00000420058 C1orf159Q96HA4 380 aa12.47□□□□□ -0.41
NFE4-201ENST00000420058 FOXN4Q96NZ1 517 aa12.47□□□□□ -0.41
NFE4-201ENST00000420058 SDF2Q99470 211 aa12.47□□□□□ -0.41
NFE4-201ENST00000420058 SOX7Q9BT81 388 aa12.47□□□□□ -0.41
NFE4-201ENST00000420058 THUMPD3Q9BV44 507 aaKnown RBP12.47□□□□□ -0.41
NFE4-201ENST00000420058 ACTRT3Q9BYD9 372 aa12.47□□□□□ -0.41
NFE4-201ENST00000420058 LAT2Q9GZY6 243 aa12.47□□□□□ -0.41
NFE4-201ENST00000420058 OXSMQ9NWU1 459 aa12.47□□□□□ -0.41
NFE4-201ENST00000420058 MALT1Q9UDY8 824 aa12.47□□□□□ -0.41
NFE4-201ENST00000420058 DCDC2Q9UHG0 476 aa12.47□□□□□ -0.41
NFE4-201ENST00000420058 POU2F3Q9UKI9 436 aa12.47□□□□□ -0.41
NFE4-201ENST00000420058 CIB4A0PJX0 185 aa12.46□□□□□ -0.41
NFE4-201ENST00000420058 SERINC4A6NH21 518 aa12.46□□□□□ -0.41
NFE4-201ENST00000420058 H3BNH8 94 aa12.46□□□□□ -0.41
NFE4-201ENST00000420058 WIPF1O43516 503 aa12.46□□□□□ -0.41
NFE4-201ENST00000420058 PLIN3O60664 434 aa12.46□□□□□ -0.41
NFE4-201ENST00000420058 FCMRO60667 390 aa12.46□□□□□ -0.41
NFE4-201ENST00000420058 BCAS1O75363 584 aaPredicted RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms