RNA–Protein interactions for RNA: ENST00000419981.1

PTCD1-202, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-202ENST00000419981 EMX2Q04743 252 aa15.33■□□□□ 0.04
PTCD1-202ENST00000419981 SKP2Q13309 424 aa15.33■□□□□ 0.04
PTCD1-202ENST00000419981 TNK1Q13470 666 aa15.33■□□□□ 0.04
PTCD1-202ENST00000419981 VEZF1Q14119 521 aa15.33■□□□□ 0.04
PTCD1-202ENST00000419981 ZNF141Q15928 474 aa15.33■□□□□ 0.04
PTCD1-202ENST00000419981 ARHGAP11BQ3KRB8 267 aa15.33■□□□□ 0.04
PTCD1-202ENST00000419981 OR4F3Q6IEY1 312 aa15.33■□□□□ 0.04
PTCD1-202ENST00000419981 C16orf62Q7Z3J2 963 aa15.33■□□□□ 0.04
PTCD1-202ENST00000419981 CLECL1Q8IZS7 167 aa15.33■□□□□ 0.04
PTCD1-202ENST00000419981 TMEM234Q8WY98 164 aa15.33■□□□□ 0.04
PTCD1-202ENST00000419981 ST8SIA1Q92185 356 aa15.33■□□□□ 0.04
PTCD1-202ENST00000419981 THUMPD3Q9BV44 507 aaKnown RBP15.33■□□□□ 0.04
PTCD1-202ENST00000419981 QRSL1Q9H0R6 528 aaKnown RBP15.33■□□□□ 0.04
PTCD1-202ENST00000419981 SERINC1Q9NRX5 453 aa15.33■□□□□ 0.04
PTCD1-202ENST00000419981 ASIC5Q9NY37 505 aa15.33■□□□□ 0.04
PTCD1-202ENST00000419981 PRSS50Q9UI38 385 aa15.33■□□□□ 0.04
PTCD1-202ENST00000419981 ING1Q9UK53 422 aaPredicted RBP15.33■□□□□ 0.04
PTCD1-202ENST00000419981 A0A1W2PP18 115 aa15.32■□□□□ 0.04
PTCD1-202ENST00000419981 OVOL3O00110 214 aa15.32■□□□□ 0.04
PTCD1-202ENST00000419981 SMAD9O15198 467 aaKnown RBP15.32■□□□□ 0.04
PTCD1-202ENST00000419981 LYZL6O75951 148 aa15.32■□□□□ 0.04
PTCD1-202ENST00000419981 H6PDO95479 791 aa15.32■□□□□ 0.04
PTCD1-202ENST00000419981 DANCRP0C864 163 aa15.32■□□□□ 0.04
PTCD1-202ENST00000419981 CREB1P16220 341 aa15.32■□□□□ 0.04
PTCD1-202ENST00000419981 PGCP20142 388 aa15.32■□□□□ 0.04
PTCD1-202ENST00000419981 BSPH1Q075Z2 132 aa15.32■□□□□ 0.04
PTCD1-202ENST00000419981 STK11Q15831 433 aa15.32■□□□□ 0.04
PTCD1-202ENST00000419981 ETFDHQ16134 617 aa15.32■□□□□ 0.04
PTCD1-202ENST00000419981 CLEC12BQ2HXU8 276 aa15.32■□□□□ 0.04
PTCD1-202ENST00000419981 SMU1Q2TAY7 513 aa15.32■□□□□ 0.04
PTCD1-202ENST00000419981 ZNF672Q499Z4 452 aaPredicted RBP15.32■□□□□ 0.04
PTCD1-202ENST00000419981 ATG4DQ86TL0 474 aaPredicted RBP15.32■□□□□ 0.04
PTCD1-202ENST00000419981 CLEC4FQ8N1N0 589 aa15.32■□□□□ 0.04
PTCD1-202ENST00000419981 KBTBD8Q8NFY9 601 aa15.32■□□□□ 0.04
PTCD1-202ENST00000419981 OR4A15Q8NGL6 344 aa15.32■□□□□ 0.04
PTCD1-202ENST00000419981 PIWIL2Q8TC59 973 aaKnown RBP15.32■□□□□ 0.04
PTCD1-202ENST00000419981 SMAP2Q8WU79 429 aaPredicted RBP15.32■□□□□ 0.04
PTCD1-202ENST00000419981 NEUROG1Q92886 237 aa15.32■□□□□ 0.04
PTCD1-202ENST00000419981 GTPBP3Q969Y2 492 aaKnown RBP15.32■□□□□ 0.04
PTCD1-202ENST00000419981 ZIM3Q96PE6 472 aa15.32■□□□□ 0.04
PTCD1-202ENST00000419981 ZNF300Q96RE9 604 aaPredicted RBP15.32■□□□□ 0.04
PTCD1-202ENST00000419981 ZNF350Q9GZX5 532 aa15.32■□□□□ 0.04
PTCD1-202ENST00000419981 EXD2Q9NVH0 621 aa15.32■□□□□ 0.04
PTCD1-202ENST00000419981 KCNE5Q9UJ90 142 aa15.32■□□□□ 0.04
PTCD1-202ENST00000419981 MKLN1Q9UL63 735 aa15.32■□□□□ 0.04
PTCD1-202ENST00000419981 PCDHGB4Q9UN71 923 aa15.32■□□□□ 0.04
PTCD1-202ENST00000419981 PLCE1Q9P212 2302 aa15.31■□□□□ 0.04
PTCD1-202ENST00000419981 CENPVL1A0A0U1RR11 272 aa15.31■□□□□ 0.04
PTCD1-202ENST00000419981 ZNF724A8MTY0 619 aa15.31■□□□□ 0.04
PTCD1-202ENST00000419981 RNASET2O00584 256 aaKnown RBP15.31■□□□□ 0.04
PTCD1-202ENST00000419981 FCMRO60667 390 aa15.31■□□□□ 0.04
PTCD1-202ENST00000419981 DNAJA2O60884 412 aa15.31■□□□□ 0.04
PTCD1-202ENST00000419981 UGT2B17O75795 530 aa15.31■□□□□ 0.04
PTCD1-202ENST00000419981 FESP07332 822 aa15.31■□□□□ 0.04
PTCD1-202ENST00000419981 SOD3P08294 240 aa15.31■□□□□ 0.04
PTCD1-202ENST00000419981 UBTFL6P0CB48 400 aaPredicted RBP15.31■□□□□ 0.04
PTCD1-202ENST00000419981 ETV4P43268 484 aa15.31■□□□□ 0.04
PTCD1-202ENST00000419981 DIO1P49895 249 aa15.31■□□□□ 0.04
PTCD1-202ENST00000419981 SESN3P58005 492 aa15.31■□□□□ 0.04
PTCD1-202ENST00000419981 VSNL1P62760 191 aa15.31■□□□□ 0.04
PTCD1-202ENST00000419981 CSNK2A1P68400 391 aaPredicted RBP15.31■□□□□ 0.04
PTCD1-202ENST00000419981 MERTKQ12866 999 aa15.31■□□□□ 0.04
PTCD1-202ENST00000419981 PDCD2Q16342 344 aaPredicted RBP15.31■□□□□ 0.04
PTCD1-202ENST00000419981 SEZ6L2Q6UXD5 910 aa15.31■□□□□ 0.04
PTCD1-202ENST00000419981 EIF3MQ7L2H7 374 aaKnown RBP15.31■□□□□ 0.04
PTCD1-202ENST00000419981 OLIG3Q7RTU3 272 aa15.31■□□□□ 0.04
PTCD1-202ENST00000419981 NUDCD3Q8IVD9 361 aa15.31■□□□□ 0.04
PTCD1-202ENST00000419981 SLC25A43Q8WUT9 341 aaPredicted RBP15.31■□□□□ 0.04
PTCD1-202ENST00000419981 PPP1R36Q96LQ0 422 aa15.31■□□□□ 0.04
PTCD1-202ENST00000419981 DPY30Q9C005 99 aa15.31■□□□□ 0.04
PTCD1-202ENST00000419981 OR51I1Q9H343 314 aa15.31■□□□□ 0.04
PTCD1-202ENST00000419981 MAGED1Q9Y5V3 778 aaPredicted RBP15.31■□□□□ 0.04
PTCD1-202ENST00000419981 ABCA1O95477 2261 aa15.31■□□□□ 0.04
PTCD1-202ENST00000419981 DPRXA6NFQ7 191 aa15.3■□□□□ 0.04
PTCD1-202ENST00000419981 KIAA1324LA8MWY0 1029 aaPredicted RBP15.3■□□□□ 0.04
PTCD1-202ENST00000419981 C9JVG2 144 aa15.3■□□□□ 0.04
PTCD1-202ENST00000419981 SULT2B1O00204 365 aa15.3■□□□□ 0.04
PTCD1-202ENST00000419981 TYROBPO43914 113 aa15.3■□□□□ 0.04
PTCD1-202ENST00000419981 AGR2O95994 175 aa15.3■□□□□ 0.04
PTCD1-202ENST00000419981 COX5AP20674 150 aa15.3■□□□□ 0.04
PTCD1-202ENST00000419981 IDUAP35475 653 aa15.3■□□□□ 0.04
PTCD1-202ENST00000419981 CDKN1AP38936 164 aa15.3■□□□□ 0.04
PTCD1-202ENST00000419981 CASP9P55211 416 aa15.3■□□□□ 0.04
PTCD1-202ENST00000419981 PPA1Q15181 289 aa15.3■□□□□ 0.04
PTCD1-202ENST00000419981 JMJD1CQ15652 2540 aa15.3■□□□□ 0.04
PTCD1-202ENST00000419981 SYT14P1Q58G82 188 aa15.3■□□□□ 0.04
PTCD1-202ENST00000419981 ATAD3BQ5T9A4 648 aa15.3■□□□□ 0.04
PTCD1-202ENST00000419981 TMPPEQ6ZT21 453 aa15.3■□□□□ 0.04
PTCD1-202ENST00000419981 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.3■□□□□ 0.04
PTCD1-202ENST00000419981 GALNT5Q7Z7M9 940 aa15.3■□□□□ 0.04
PTCD1-202ENST00000419981 ZNF100Q8IYN0 542 aa15.3■□□□□ 0.04
PTCD1-202ENST00000419981 OR8J2Q8NGG1 315 aa15.3■□□□□ 0.04
PTCD1-202ENST00000419981 MIPOL1Q8TD10 442 aa15.3■□□□□ 0.04
PTCD1-202ENST00000419981 ZNF775Q96BV0 537 aaPredicted RBP15.3■□□□□ 0.04
PTCD1-202ENST00000419981 MUCL1Q96DR8 90 aa15.3■□□□□ 0.04
PTCD1-202ENST00000419981 PKNOX2Q96KN3 472 aa15.3■□□□□ 0.04
PTCD1-202ENST00000419981 TRIM2Q9C040 744 aa15.3■□□□□ 0.04
PTCD1-202ENST00000419981 ACER3Q9NUN7 267 aa15.3■□□□□ 0.04
PTCD1-202ENST00000419981 LIPT1Q9Y234 373 aa15.3■□□□□ 0.04
PTCD1-202ENST00000419981 SLC35A3Q9Y2D2 325 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms