RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 H0YC42 278 aa16.79■□□□□ 0.28
PTCD3-204ENST00000418628 AP3D1O14617 1153 aa16.79■□□□□ 0.28
PTCD3-204ENST00000418628 CLDN1O95832 211 aa16.79■□□□□ 0.28
PTCD3-204ENST00000418628 NUDT14O95848 222 aa16.79■□□□□ 0.28
PTCD3-204ENST00000418628 PRKAR1BP31321 381 aa16.79■□□□□ 0.28
PTCD3-204ENST00000418628 ACAA2P42765 397 aaKnown RBP16.79■□□□□ 0.28
PTCD3-204ENST00000418628 TPD52P55327 224 aaPredicted RBP16.79■□□□□ 0.28
PTCD3-204ENST00000418628 SESN3P58005 492 aa16.79■□□□□ 0.28
PTCD3-204ENST00000418628 LARS2Q15031 903 aaKnown RBP16.79■□□□□ 0.28
PTCD3-204ENST00000418628 MRGPRGQ86SM5 289 aa16.79■□□□□ 0.28
PTCD3-204ENST00000418628 SLC30A8Q8IWU4 369 aa16.79■□□□□ 0.28
PTCD3-204ENST00000418628 ZNF440Q8IYI8 595 aa16.79■□□□□ 0.28
PTCD3-204ENST00000418628 CLIP4Q8N3C7 705 aa16.79■□□□□ 0.28
PTCD3-204ENST00000418628 ZNF583Q96ND8 569 aa16.79■□□□□ 0.28
PTCD3-204ENST00000418628 RLIMQ9NVW2 624 aa16.79■□□□□ 0.28
PTCD3-204ENST00000418628 ANGPT4Q9Y264 503 aa16.79■□□□□ 0.28
PTCD3-204ENST00000418628 ADGRG4Q8IZF6 3080 aa16.79■□□□□ 0.28
PTCD3-204ENST00000418628 A0A0G2JNJ9 132 aa16.78■□□□□ 0.28
PTCD3-204ENST00000418628 ADAMDEC1O15204 470 aa16.78■□□□□ 0.28
PTCD3-204ENST00000418628 DCTN3O75935 186 aa16.78■□□□□ 0.28
PTCD3-204ENST00000418628 SHC1P29353 583 aa16.78■□□□□ 0.28
PTCD3-204ENST00000418628 CRYBA2P53672 197 aa16.78■□□□□ 0.28
PTCD3-204ENST00000418628 PMPCAQ10713 525 aa16.78■□□□□ 0.28
PTCD3-204ENST00000418628 SELENBP1Q13228 472 aa16.78■□□□□ 0.28
PTCD3-204ENST00000418628 VMACQ2NL98 169 aa16.78■□□□□ 0.28
PTCD3-204ENST00000418628 XKRXQ6PP77 449 aa16.78■□□□□ 0.28
PTCD3-204ENST00000418628 ARPINQ7Z6K5 226 aa16.78■□□□□ 0.28
PTCD3-204ENST00000418628 MEIOBQ8N635 442 aa16.78■□□□□ 0.28
PTCD3-204ENST00000418628 NAXEQ8NCW5 288 aa16.78■□□□□ 0.28
PTCD3-204ENST00000418628 TMEM234Q8WY98 164 aa16.78■□□□□ 0.28
PTCD3-204ENST00000418628 RND1Q92730 232 aa16.78■□□□□ 0.28
PTCD3-204ENST00000418628 CMTM5Q96DZ9 223 aa16.78■□□□□ 0.28
PTCD3-204ENST00000418628 REXO5Q96IC2 774 aaKnown RBP16.78■□□□□ 0.28
PTCD3-204ENST00000418628 Q9UFV3 132 aa16.78■□□□□ 0.28
PTCD3-204ENST00000418628 RNF6Q9Y252 685 aa16.78■□□□□ 0.28
PTCD3-204ENST00000418628 ANKHD1Q8IWZ3 2542 aaKnown RBP16.78■□□□□ 0.28
PTCD3-204ENST00000418628 CFAP73A6NFT4 308 aa16.77■□□□□ 0.28
PTCD3-204ENST00000418628 FAM220BPB1ANY3 271 aa16.77■□□□□ 0.28
PTCD3-204ENST00000418628 CYP7B1O75881 506 aa16.77■□□□□ 0.28
PTCD3-204ENST00000418628 MFN2O95140 757 aa16.77■□□□□ 0.28
PTCD3-204ENST00000418628 SMSP52788 366 aa16.77■□□□□ 0.28
PTCD3-204ENST00000418628 SRYQ05066 204 aa16.77■□□□□ 0.28
PTCD3-204ENST00000418628 DMTNQ08495 405 aa16.77■□□□□ 0.28
PTCD3-204ENST00000418628 ZNF311Q5JNZ3 666 aa16.77■□□□□ 0.28
PTCD3-204ENST00000418628 POMZP3Q6PJE2 187 aa16.77■□□□□ 0.28
PTCD3-204ENST00000418628 ESPNLQ6ZVH7 1005 aa16.77■□□□□ 0.28
PTCD3-204ENST00000418628 PLEKHM3Q6ZWE6 761 aa16.77■□□□□ 0.28
PTCD3-204ENST00000418628 CCDC80Q76M96 950 aa16.77■□□□□ 0.28
PTCD3-204ENST00000418628 GRINAQ7Z429 371 aa16.77■□□□□ 0.28
PTCD3-204ENST00000418628 KRT73Q86Y46 540 aa16.77■□□□□ 0.28
PTCD3-204ENST00000418628 SLC15A3Q8IY34 581 aa16.77■□□□□ 0.28
PTCD3-204ENST00000418628 UBQLNLQ8IYU4 475 aa16.77■□□□□ 0.28
PTCD3-204ENST00000418628 C9orf106Q8NAJ2 232 aa16.77■□□□□ 0.28
PTCD3-204ENST00000418628 TNIP2Q8NFZ5 429 aa16.77■□□□□ 0.28
PTCD3-204ENST00000418628 LRRC37BQ96QE4 947 aa16.77■□□□□ 0.28
PTCD3-204ENST00000418628 COQ10BQ9H8M1 238 aa16.77■□□□□ 0.28
PTCD3-204ENST00000418628 EFCAB1Q9HAE3 211 aa16.77■□□□□ 0.28
PTCD3-204ENST00000418628 CMTM6Q9NX76 183 aa16.77■□□□□ 0.28
PTCD3-204ENST00000418628 ALKBH4Q9NXW9 302 aa16.77■□□□□ 0.28
PTCD3-204ENST00000418628 ABCD2Q9UBJ2 740 aa16.77■□□□□ 0.28
PTCD3-204ENST00000418628 SETXQ7Z333 2677 aaKnown RBP16.77■□□□□ 0.27
PTCD3-204ENST00000418628 A0A0J9YW62 118 aa16.76■□□□□ 0.27
PTCD3-204ENST00000418628 AIM2O14862 343 aa16.76■□□□□ 0.27
PTCD3-204ENST00000418628 SEC14L5O43304 696 aa16.76■□□□□ 0.27
PTCD3-204ENST00000418628 TPST1O60507 370 aa16.76■□□□□ 0.27
PTCD3-204ENST00000418628 EEFSECP57772 596 aaKnown RBP16.76■□□□□ 0.27
PTCD3-204ENST00000418628 ART3Q13508 389 aa16.76■□□□□ 0.27
PTCD3-204ENST00000418628 VEZF1Q14119 521 aa16.76■□□□□ 0.27
PTCD3-204ENST00000418628 GLIPR1L2Q4G1C9 344 aa16.76■□□□□ 0.27
PTCD3-204ENST00000418628 GKAP1Q5VSY0 366 aaPredicted RBP16.76■□□□□ 0.27
PTCD3-204ENST00000418628 C3orf33Q6P1S2 294 aa16.76■□□□□ 0.27
PTCD3-204ENST00000418628 ERICH5Q6P6B1 374 aa16.76■□□□□ 0.27
PTCD3-204ENST00000418628 WNT2BQ93097 391 aa16.76■□□□□ 0.27
PTCD3-204ENST00000418628 KLHL15Q96M94 604 aa16.76■□□□□ 0.27
PTCD3-204ENST00000418628 ZFP3Q96NJ6 502 aa16.76■□□□□ 0.27
PTCD3-204ENST00000418628 TRIB1Q96RU8 372 aa16.76■□□□□ 0.27
PTCD3-204ENST00000418628 ZNF607Q96SK3 696 aa16.76■□□□□ 0.27
PTCD3-204ENST00000418628 SPATA5L1Q9BVQ7 753 aa16.76■□□□□ 0.27
PTCD3-204ENST00000418628 PINK1Q9BXM7 581 aa16.76■□□□□ 0.27
PTCD3-204ENST00000418628 ZNF232Q9UNY5 417 aa16.76■□□□□ 0.27
PTCD3-204ENST00000418628 USP22Q9UPT9 525 aa16.76■□□□□ 0.27
PTCD3-204ENST00000418628 ZNF175Q9Y473 711 aa16.76■□□□□ 0.27
PTCD3-204ENST00000418628 NME4O00746 187 aa16.75■□□□□ 0.27
PTCD3-204ENST00000418628 TGM6O95932 706 aa16.75■□□□□ 0.27
PTCD3-204ENST00000418628 GKN3PP0CG01 181 aa16.75■□□□□ 0.27
PTCD3-204ENST00000418628 PRG2P13727 222 aa16.75■□□□□ 0.27
PTCD3-204ENST00000418628 AQP1P29972 269 aa16.75■□□□□ 0.27
PTCD3-204ENST00000418628 CHRNB4P30926 498 aa16.75■□□□□ 0.27
PTCD3-204ENST00000418628 RYKP34925 604 aa16.75■□□□□ 0.27
PTCD3-204ENST00000418628 NUDT2P50583 147 aa16.75■□□□□ 0.27
PTCD3-204ENST00000418628 ZNF136P52737 540 aa16.75■□□□□ 0.27
PTCD3-204ENST00000418628 PLXDC2Q6UX71 529 aa16.75■□□□□ 0.27
PTCD3-204ENST00000418628 ZNF550Q7Z398 422 aa16.75■□□□□ 0.27
PTCD3-204ENST00000418628 LILRA2Q8N149 483 aa16.75■□□□□ 0.27
PTCD3-204ENST00000418628 FITM2Q8N6M3 262 aa16.75■□□□□ 0.27
PTCD3-204ENST00000418628 BHLHE22Q8NFJ8 381 aaPredicted RBP16.75■□□□□ 0.27
PTCD3-204ENST00000418628 OR10D3Q8NH80 312 aa16.75■□□□□ 0.27
PTCD3-204ENST00000418628 OR2V1Q8NHB1 315 aa16.75■□□□□ 0.27
PTCD3-204ENST00000418628 ASB5Q8WWX0 329 aa16.75■□□□□ 0.27
PTCD3-204ENST00000418628 SMPDL3BQ92485 455 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms