RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 SLCO2B1O94956 709 aa7.45□□□□□ -1.22
HMGXB4-202ENST00000418170 FPR3P25089 353 aa7.45□□□□□ -1.22
HMGXB4-202ENST00000418170 AHRP35869 848 aa7.45□□□□□ -1.22
HMGXB4-202ENST00000418170 ACVR1BP36896 505 aa7.45□□□□□ -1.22
HMGXB4-202ENST00000418170 UBE2IP63279 158 aaKnown RBP7.45□□□□□ -1.22
HMGXB4-202ENST00000418170 SNTB1Q13884 538 aaKnown RBP7.45□□□□□ -1.22
HMGXB4-202ENST00000418170 NIPAL3Q6P499 406 aa7.45□□□□□ -1.22
HMGXB4-202ENST00000418170 CRTC1Q6UUV9 634 aa7.45□□□□□ -1.22
HMGXB4-202ENST00000418170 C12orf40Q86WS4 652 aa7.45□□□□□ -1.22
HMGXB4-202ENST00000418170 SMPDL3AQ92484 453 aa7.45□□□□□ -1.22
HMGXB4-202ENST00000418170 SCLYQ96I15 445 aa7.45□□□□□ -1.22
HMGXB4-202ENST00000418170 LYSMD1Q96S90 227 aa7.45□□□□□ -1.22
HMGXB4-202ENST00000418170 ADAT1Q9BUB4 502 aaKnown RBP7.45□□□□□ -1.22
HMGXB4-202ENST00000418170 NIT2Q9NQR4 276 aa7.45□□□□□ -1.22
HMGXB4-202ENST00000418170 INPP5EQ9NRR6 644 aa7.45□□□□□ -1.22
HMGXB4-202ENST00000418170 PCOLCE2Q9UKZ9 415 aa7.45□□□□□ -1.22
HMGXB4-202ENST00000418170 TRPV2Q9Y5S1 764 aa7.45□□□□□ -1.22
HMGXB4-202ENST00000418170 MEX3AA1L020 520 aaKnown RBP7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 PYCARD-AS1I3L0S3 204 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 SOCS5O75159 536 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 ACHEP22303 614 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 XPAP23025 273 aaPredicted RBP7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 HOXC8P31273 242 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 ATP5C1P36542 298 aaKnown RBP7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 PTGFRP43088 359 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 NRG3P56975 720 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 TAS2R41P59536 307 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 STX4Q12846 297 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 SLBPQ14493 270 aaKnown RBP eCLIP7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 TRAM2Q15035 370 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 DMKNQ6E0U4 476 aaPredicted RBP7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 FAM199XQ6PEV8 388 aaPredicted RBP7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 ZNF620Q6ZNG0 422 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 OR2T33Q8NG76 320 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 OR13C5Q8NGS8 318 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 THAP6Q8TBB0 222 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 PIGXQ8TBF5 258 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 ASB13Q8WXK3 278 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 GHSRQ92847 366 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 CAMK1GQ96NX5 476 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 PRDM9Q9NQV7 894 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 MBD2Q9UBB5 411 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 DPP7Q9UHL4 492 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 RFPL4AA6NLU0 287 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 RFPL4AL1F8VTS6 287 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 GOSR2O14653 212 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 SCAMP1O15126 338 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 ZNF821O75541 412 aaPredicted RBP7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 HEXAP06865 529 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 NR2F1P10589 423 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 S100PP25815 95 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 PPP2R1BP30154 601 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 TLE2Q04725 743 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 HSPB3Q12988 150 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 C10orf91Q5T1B1 145 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 PLBD1Q6P4A8 553 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 RFLNAQ6ZTI6 216 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 NUDT18Q6ZVK8 323 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 MEPCEQ7L2J0 689 aaKnown RBP7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 ZFP82Q8N141 532 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 GPRC5AQ8NFJ5 357 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 OR10H4Q8NGA5 316 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 RXFP4Q8TDU9 374 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 BRI3BPQ8WY22 251 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 WDR34Q96EX3 536 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 EFCAB11Q9BUY7 163 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 FAM117AQ9C073 453 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 TAS2R10Q9NYW0 307 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 CARHSP1Q9Y2V2 147 aaKnown RBP7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 ZC3H12DA2A288 527 aaKnown RBP7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 PMS2P1A4D2B8 440 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 ANTXRLA6NF34 631 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 LCMT2O60294 686 aaKnown RBP7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 NTN1O95631 604 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 SPI1P17947 270 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 BUD31P41223 144 aaPredicted RBP7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 SORDQ00796 357 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 TSSK4Q6SA08 328 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 RBMS3Q6XE24 437 aaKnown RBP7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 RPTNQ6XPR3 784 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 ZFPM2Q8WW38 1151 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 PHYHIPLQ96FC7 376 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 C4orf36Q96KX1 117 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 SLC38A1Q9H2H9 487 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 KCNK12Q9HB15 430 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 ZNF334Q9HCZ1 680 aaPredicted RBP7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 IL20RAQ9UHF4 553 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 VWA8A3KMH1 1905 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 TRANK1O15050 2925 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 A0A0D9SG52 128 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 NPC1O15118 1278 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 KLF4O43474 513 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 ARL6IP5O75915 188 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 IGHV2-70P01814 119 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 CORO1AP31146 461 aaKnown RBP7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 DCTDP32321 178 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 PTH2RP49190 550 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 SSTP61278 116 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 PPIAP62937 165 aaKnown RBP7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 GPNMBQ14956 572 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms