RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 MFSD12Q6NUT3 480 aa11.51□□□□□ -0.57
LINC00339-202ENST00000416769 ZNF551Q7Z340 670 aaPredicted RBP11.51□□□□□ -0.57
LINC00339-202ENST00000416769 OR10D3Q8NH80 312 aa11.51□□□□□ -0.57
LINC00339-202ENST00000416769 FBXO30Q8TB52 745 aa11.51□□□□□ -0.57
LINC00339-202ENST00000416769 PIK3R3Q92569 461 aa11.51□□□□□ -0.57
LINC00339-202ENST00000416769 GTF2H4Q92759 462 aa11.51□□□□□ -0.57
LINC00339-202ENST00000416769 OTUB1Q96FW1 271 aaPredicted RBP11.51□□□□□ -0.57
LINC00339-202ENST00000416769 ITCHQ96J02 903 aa11.51□□□□□ -0.57
LINC00339-202ENST00000416769 ADGRG7Q96K78 797 aa11.51□□□□□ -0.57
LINC00339-202ENST00000416769 TAS2R9Q9NYW1 312 aa11.51□□□□□ -0.57
LINC00339-202ENST00000416769 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.51□□□□□ -0.57
LINC00339-202ENST00000416769 NBEAL1Q6ZS30 2694 aa11.51□□□□□ -0.57
LINC00339-202ENST00000416769 PLCE1Q9P212 2302 aa11.51□□□□□ -0.57
LINC00339-202ENST00000416769 A0A087WV62 115 aa11.5□□□□□ -0.57
LINC00339-202ENST00000416769 CCT8L1PA6NM43 557 aa11.5□□□□□ -0.57
LINC00339-202ENST00000416769 RNF212BA8MTL3 300 aa11.5□□□□□ -0.57
LINC00339-202ENST00000416769 TNFSF11O14788 317 aa11.5□□□□□ -0.57
LINC00339-202ENST00000416769 ANGPT2O15123 496 aa11.5□□□□□ -0.57
LINC00339-202ENST00000416769 CLOCKO15516 846 aa11.5□□□□□ -0.57
LINC00339-202ENST00000416769 BCAS2O75934 225 aaPredicted RBP11.5□□□□□ -0.57
LINC00339-202ENST00000416769 PSMG1O95456 288 aa11.5□□□□□ -0.57
LINC00339-202ENST00000416769 CPSF4O95639 269 aaKnown RBP11.5□□□□□ -0.57
LINC00339-202ENST00000416769 ANGPTL1O95841 491 aa11.5□□□□□ -0.57
LINC00339-202ENST00000416769 NPPAP01160 153 aa11.5□□□□□ -0.57
LINC00339-202ENST00000416769 ZCCHC18P0CG32 403 aa11.5□□□□□ -0.57
LINC00339-202ENST00000416769 GPC1P35052 558 aa11.5□□□□□ -0.57
LINC00339-202ENST00000416769 ACVR1BP36896 505 aa11.5□□□□□ -0.57
LINC00339-202ENST00000416769 HBA1P69905 142 aa11.5□□□□□ -0.57
LINC00339-202ENST00000416769 GABPB1Q06547 395 aaPredicted RBP11.5□□□□□ -0.57
LINC00339-202ENST00000416769 DMTNQ08495 405 aa11.5□□□□□ -0.57
LINC00339-202ENST00000416769 MMEL1Q495T6 779 aa11.5□□□□□ -0.57
LINC00339-202ENST00000416769 PAGE3Q5JUK9 113 aa11.5□□□□□ -0.57
LINC00339-202ENST00000416769 C6orf89Q6UWU4 347 aa11.5□□□□□ -0.57
LINC00339-202ENST00000416769 ANKRD46Q86W74 232 aa11.5□□□□□ -0.57
LINC00339-202ENST00000416769 SNX32Q86XE0 403 aa11.5□□□□□ -0.57
LINC00339-202ENST00000416769 CLECL1Q8IZS7 167 aa11.5□□□□□ -0.57
LINC00339-202ENST00000416769 DPP10Q8N608 796 aa11.5□□□□□ -0.57
LINC00339-202ENST00000416769 ZNF611Q8N823 705 aa11.5□□□□□ -0.57
LINC00339-202ENST00000416769 OR4A15Q8NGL6 344 aa11.5□□□□□ -0.57
LINC00339-202ENST00000416769 OR6K3Q8NGY3 331 aa11.5□□□□□ -0.57
LINC00339-202ENST00000416769 ROBO4Q8WZ75 1007 aa11.5□□□□□ -0.57
LINC00339-202ENST00000416769 S100PBPQ96BU1 408 aa11.5□□□□□ -0.57
LINC00339-202ENST00000416769 ELP4Q96EB1 424 aa11.5□□□□□ -0.57
LINC00339-202ENST00000416769 NSL1Q96IY1 281 aa11.5□□□□□ -0.57
LINC00339-202ENST00000416769 PANX1Q96RD7 426 aa11.5□□□□□ -0.57
LINC00339-202ENST00000416769 EFCAB1Q9HAE3 211 aa11.5□□□□□ -0.57
LINC00339-202ENST00000416769 EQTNQ9NQ60 294 aa11.5□□□□□ -0.57
LINC00339-202ENST00000416769 PLSCR4Q9NRQ2 329 aa11.5□□□□□ -0.57
LINC00339-202ENST00000416769 SIRT3Q9NTG7 399 aaPredicted RBP11.5□□□□□ -0.57
LINC00339-202ENST00000416769 FBXO34Q9NWN3 711 aa11.5□□□□□ -0.57
LINC00339-202ENST00000416769 NTMQ9P121 344 aa11.5□□□□□ -0.57
LINC00339-202ENST00000416769 TAGLN3Q9UI15 199 aa11.5□□□□□ -0.57
LINC00339-202ENST00000416769 GDF2Q9UK05 429 aaPredicted RBP11.5□□□□□ -0.57
LINC00339-202ENST00000416769 MAGED1Q9Y5V3 778 aaPredicted RBP11.5□□□□□ -0.57
LINC00339-202ENST00000416769 A0A0J9YW62 118 aa11.49□□□□□ -0.57
LINC00339-202ENST00000416769 FBP2O00757 339 aa11.49□□□□□ -0.57
LINC00339-202ENST00000416769 RFXANKO14593 260 aa11.49□□□□□ -0.57
LINC00339-202ENST00000416769 SS18L1O75177 396 aaPredicted RBP11.49□□□□□ -0.57
LINC00339-202ENST00000416769 KCNH1O95259 989 aa11.49□□□□□ -0.57
LINC00339-202ENST00000416769 IL33O95760 270 aa11.49□□□□□ -0.57
LINC00339-202ENST00000416769 IGHV4-39P01824 125 aa11.49□□□□□ -0.57
LINC00339-202ENST00000416769 EFNA1P20827 205 aaPredicted RBP11.49□□□□□ -0.57
LINC00339-202ENST00000416769 UQCRC2P22695 453 aa11.49□□□□□ -0.57
LINC00339-202ENST00000416769 EDNRAP25101 427 aa11.49□□□□□ -0.57
LINC00339-202ENST00000416769 PSMA4P25789 261 aaKnown RBP11.49□□□□□ -0.57
LINC00339-202ENST00000416769 GABRA3P34903 492 aa11.49□□□□□ -0.57
LINC00339-202ENST00000416769 FAPQ12884 760 aa11.49□□□□□ -0.57
LINC00339-202ENST00000416769 HSPB3Q12988 150 aa11.49□□□□□ -0.57
LINC00339-202ENST00000416769 LRIF1Q5T3J3 769 aa11.49□□□□□ -0.57
LINC00339-202ENST00000416769 HMBOX1Q6NT76 420 aa11.49□□□□□ -0.57
LINC00339-202ENST00000416769 SLC2A7Q6PXP3 512 aa11.49□□□□□ -0.57
LINC00339-202ENST00000416769 SEZ6L2Q6UXD5 910 aa11.49□□□□□ -0.57
LINC00339-202ENST00000416769 NUFIP2Q7Z417 695 aaKnown RBP11.49□□□□□ -0.57
LINC00339-202ENST00000416769 TRIML2Q8N7C3 387 aa11.49□□□□□ -0.57
LINC00339-202ENST00000416769 POU5F2Q8N7G0 328 aa11.49□□□□□ -0.57
LINC00339-202ENST00000416769 PCYOX1LQ8NBM8 494 aa11.49□□□□□ -0.57
LINC00339-202ENST00000416769 KBTBD8Q8NFY9 601 aa11.49□□□□□ -0.57
LINC00339-202ENST00000416769 POC1BQ8TC44 478 aa11.49□□□□□ -0.57
LINC00339-202ENST00000416769 ABHD3Q8WU67 409 aa11.49□□□□□ -0.57
LINC00339-202ENST00000416769 MOAP1Q96BY2 351 aa11.49□□□□□ -0.57
LINC00339-202ENST00000416769 ZNF524Q96C55 264 aa11.49□□□□□ -0.57
LINC00339-202ENST00000416769 REG4Q9BYZ8 158 aa11.49□□□□□ -0.57
LINC00339-202ENST00000416769 PRRG4Q9BZD6 226 aa11.49□□□□□ -0.57
LINC00339-202ENST00000416769 PAIP1Q9H074 479 aaKnown RBP11.49□□□□□ -0.57
LINC00339-202ENST00000416769 CXorf56Q9H5V9 222 aa11.49□□□□□ -0.57
LINC00339-202ENST00000416769 C3orf14Q9HBI5 128 aa11.49□□□□□ -0.57
LINC00339-202ENST00000416769 ARL8BQ9NVJ2 186 aa11.49□□□□□ -0.57
LINC00339-202ENST00000416769 ABCG2Q9UNQ0 655 aa11.49□□□□□ -0.57
LINC00339-202ENST00000416769 C19orf53Q9UNZ5 99 aaPredicted RBP11.49□□□□□ -0.57
LINC00339-202ENST00000416769 EMC9Q9Y3B6 208 aa11.49□□□□□ -0.57
LINC00339-202ENST00000416769 AP4B1Q9Y6B7 739 aa11.49□□□□□ -0.57
LINC00339-202ENST00000416769 A0A096LPI6 279 aa11.48□□□□□ -0.57
LINC00339-202ENST00000416769 OVOL3O00110 214 aa11.48□□□□□ -0.57
LINC00339-202ENST00000416769 MRASO14807 208 aa11.48□□□□□ -0.57
LINC00339-202ENST00000416769 OIP5O43482 229 aa11.48□□□□□ -0.57
LINC00339-202ENST00000416769 GPRIN2O60269 458 aa11.48□□□□□ -0.57
LINC00339-202ENST00000416769 ADAM11O75078 769 aa11.48□□□□□ -0.57
LINC00339-202ENST00000416769 ANP32DO95626 131 aa11.48□□□□□ -0.57
LINC00339-202ENST00000416769 PLGP00747 810 aaPredicted RBP11.48□□□□□ -0.57
LINC00339-202ENST00000416769 DANCRP0C864 163 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms