RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 PGM1P36871 562 aa13.44□□□□□ -0.26
UBXN4-203ENST00000416538 TIGD2Q4W5G0 525 aa13.44□□□□□ -0.26
UBXN4-203ENST00000416538 BHLHB9Q6PI77 547 aa13.44□□□□□ -0.26
UBXN4-203ENST00000416538 SEZ6L2Q6UXD5 910 aa13.44□□□□□ -0.26
UBXN4-203ENST00000416538 FCRLAQ7L513 359 aa13.44□□□□□ -0.26
UBXN4-203ENST00000416538 C16orf62Q7Z3J2 963 aa13.44□□□□□ -0.26
UBXN4-203ENST00000416538 TUSC5Q8IXB3 177 aa13.44□□□□□ -0.26
UBXN4-203ENST00000416538 GABRG1Q8N1C3 465 aa13.44□□□□□ -0.26
UBXN4-203ENST00000416538 MGARPQ8TDB4 240 aa13.44□□□□□ -0.26
UBXN4-203ENST00000416538 IGFBPL1Q8WX77 278 aa13.44□□□□□ -0.26
UBXN4-203ENST00000416538 CPNE4Q96A23 557 aaPredicted RBP13.44□□□□□ -0.26
UBXN4-203ENST00000416538 ROPN1LQ96C74 230 aa13.44□□□□□ -0.26
UBXN4-203ENST00000416538 CCDC115Q96NT0 180 aa13.44□□□□□ -0.26
UBXN4-203ENST00000416538 SMR3AQ99954 134 aa13.44□□□□□ -0.26
UBXN4-203ENST00000416538 SLC35A5Q9BS91 424 aa13.44□□□□□ -0.26
UBXN4-203ENST00000416538 THUMPD3Q9BV44 507 aaKnown RBP13.44□□□□□ -0.26
UBXN4-203ENST00000416538 LAT2Q9GZY6 243 aa13.44□□□□□ -0.26
UBXN4-203ENST00000416538 GPR45Q9Y5Y3 372 aa13.44□□□□□ -0.26
UBXN4-203ENST00000416538 DUXAA6NLW8 204 aa13.43□□□□□ -0.26
UBXN4-203ENST00000416538 HMGN4O00479 90 aa13.43□□□□□ -0.26
UBXN4-203ENST00000416538 CYP7B1O75881 506 aa13.43□□□□□ -0.26
UBXN4-203ENST00000416538 CSTAP01040 98 aa13.43□□□□□ -0.26
UBXN4-203ENST00000416538 SESN3P58005 492 aa13.43□□□□□ -0.26
UBXN4-203ENST00000416538 PPP2R2AP63151 447 aa13.43□□□□□ -0.26
UBXN4-203ENST00000416538 CBFBQ13951 182 aa13.43□□□□□ -0.26
UBXN4-203ENST00000416538 DPY19L1Q2PZI1 675 aa13.43□□□□□ -0.26
UBXN4-203ENST00000416538 ATG4DQ86TL0 474 aaPredicted RBP13.43□□□□□ -0.26
UBXN4-203ENST00000416538 RNF130Q86XS8 419 aa13.43□□□□□ -0.26
UBXN4-203ENST00000416538 LRRC34Q8IZ02 419 aa13.43□□□□□ -0.26
UBXN4-203ENST00000416538 ANKFN1Q8N957 763 aa13.43□□□□□ -0.26
UBXN4-203ENST00000416538 TOR1AIP2Q8NFQ8 470 aa13.43□□□□□ -0.26
UBXN4-203ENST00000416538 XAGE5Q8WWM1 108 aa13.43□□□□□ -0.26
UBXN4-203ENST00000416538 ZNF300Q96RE9 604 aaPredicted RBP13.43□□□□□ -0.26
UBXN4-203ENST00000416538 PSD2Q9BQI7 771 aa13.43□□□□□ -0.26
UBXN4-203ENST00000416538 ACTR6Q9GZN1 396 aa13.43□□□□□ -0.26
UBXN4-203ENST00000416538 SAP130Q9H0E3 1048 aa13.43□□□□□ -0.26
UBXN4-203ENST00000416538 GLRX2Q9NS18 164 aa13.43□□□□□ -0.26
UBXN4-203ENST00000416538 BEX4Q9NWD9 120 aaPredicted RBP13.43□□□□□ -0.26
UBXN4-203ENST00000416538 WDR45Q9Y484 360 aa13.43□□□□□ -0.26
UBXN4-203ENST00000416538 SOX30O94993 753 aa13.42□□□□□ -0.26
UBXN4-203ENST00000416538 SNUPNO95149 360 aaKnown RBP13.42□□□□□ -0.26
UBXN4-203ENST00000416538 GSNP06396 782 aa13.42□□□□□ -0.26
UBXN4-203ENST00000416538 CHRM4P08173 479 aa13.42□□□□□ -0.26
UBXN4-203ENST00000416538 PSMB1P20618 241 aaKnown RBP13.42□□□□□ -0.26
UBXN4-203ENST00000416538 S100A3P33764 101 aa13.42□□□□□ -0.26
UBXN4-203ENST00000416538 KHKP50053 298 aa13.42□□□□□ -0.26
UBXN4-203ENST00000416538 CLNS1AP54105 237 aaKnown RBP13.42□□□□□ -0.26
UBXN4-203ENST00000416538 CHRNEQ04844 493 aa13.42□□□□□ -0.26
UBXN4-203ENST00000416538 MAPK11Q15759 364 aa13.42□□□□□ -0.26
UBXN4-203ENST00000416538 COX20Q5RI15 118 aa13.42□□□□□ -0.26
UBXN4-203ENST00000416538 PDSS1Q5T2R2 415 aa13.42□□□□□ -0.26
UBXN4-203ENST00000416538 ANXA8L1Q5VT79 327 aa13.42□□□□□ -0.26
UBXN4-203ENST00000416538 HHATQ5VTY9 493 aa13.42□□□□□ -0.26
UBXN4-203ENST00000416538 C3orf33Q6P1S2 294 aa13.42□□□□□ -0.26
UBXN4-203ENST00000416538 DNAJC14Q6Y2X3 702 aaPredicted RBP13.42□□□□□ -0.26
UBXN4-203ENST00000416538 PLEKHM3Q6ZWE6 761 aa13.42□□□□□ -0.26
UBXN4-203ENST00000416538 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.42□□□□□ -0.26
UBXN4-203ENST00000416538 WFDC8Q8IUA0 241 aa13.42□□□□□ -0.26
UBXN4-203ENST00000416538 ZNF619Q8N2I2 560 aa13.42□□□□□ -0.26
UBXN4-203ENST00000416538 ST8SIA1Q92185 356 aa13.42□□□□□ -0.26
UBXN4-203ENST00000416538 S100PBPQ96BU1 408 aa13.42□□□□□ -0.26
UBXN4-203ENST00000416538 TLCD1Q96CP7 247 aa13.42□□□□□ -0.26
UBXN4-203ENST00000416538 DNAJA3Q96EY1 480 aa13.42□□□□□ -0.26
UBXN4-203ENST00000416538 POM121Q96HA1 1249 aa13.42□□□□□ -0.26
UBXN4-203ENST00000416538 SLC38A1Q9H2H9 487 aa13.42□□□□□ -0.26
UBXN4-203ENST00000416538 EXD2Q9NVH0 621 aa13.42□□□□□ -0.26
UBXN4-203ENST00000416538 BTNL2Q9UIR0 455 aa13.42□□□□□ -0.26
UBXN4-203ENST00000416538 EDARQ9UNE0 448 aa13.42□□□□□ -0.26
UBXN4-203ENST00000416538 CR1P17927 2039 aa13.41□□□□□ -0.26
UBXN4-203ENST00000416538 UQCRHLA0A096LP55 91 aa13.41□□□□□ -0.26
UBXN4-203ENST00000416538 ZNF814B7Z6K7 855 aa13.41□□□□□ -0.26
UBXN4-203ENST00000416538 AP3D1O14617 1153 aa13.41□□□□□ -0.26
UBXN4-203ENST00000416538 HDAC3O15379 428 aa13.41□□□□□ -0.26
UBXN4-203ENST00000416538 GUSBP08236 651 aa13.41□□□□□ -0.26
UBXN4-203ENST00000416538 KITP10721 976 aa13.41□□□□□ -0.26
UBXN4-203ENST00000416538 HOXB4P17483 251 aaPredicted RBP13.41□□□□□ -0.26
UBXN4-203ENST00000416538 CHI3L1P36222 383 aaPredicted RBP13.41□□□□□ -0.26
UBXN4-203ENST00000416538 MVDP53602 400 aa13.41□□□□□ -0.26
UBXN4-203ENST00000416538 RAC3P60763 192 aa13.41□□□□□ -0.26
UBXN4-203ENST00000416538 RNPS1Q15287 305 aaKnown RBP13.41□□□□□ -0.26
UBXN4-203ENST00000416538 SYPL1Q16563 259 aa13.41□□□□□ -0.26
UBXN4-203ENST00000416538 ACKR1Q16570 336 aa13.41□□□□□ -0.26
UBXN4-203ENST00000416538 GTDC1Q4AE62 458 aa13.41□□□□□ -0.26
UBXN4-203ENST00000416538 SLC9B1Q4ZJI4 515 aa13.41□□□□□ -0.26
UBXN4-203ENST00000416538 Q5PR19 223 aa13.41□□□□□ -0.26
UBXN4-203ENST00000416538 AP1ARQ63HQ0 302 aa13.41□□□□□ -0.26
UBXN4-203ENST00000416538 ABLIM2Q6H8Q1 611 aa13.41□□□□□ -0.26
UBXN4-203ENST00000416538 BEND4Q6ZU67 534 aa13.41□□□□□ -0.26
UBXN4-203ENST00000416538 ZNF454Q8N9F8 522 aa13.41□□□□□ -0.26
UBXN4-203ENST00000416538 PNPT1Q8TCS8 783 aaKnown RBP13.41□□□□□ -0.26
UBXN4-203ENST00000416538 CNOT9Q92600 299 aaKnown RBP13.41□□□□□ -0.26
UBXN4-203ENST00000416538 ZNF75CPQ92670 426 aaPredicted RBP13.41□□□□□ -0.26
UBXN4-203ENST00000416538 MAELQ96JY0 434 aaKnown RBP13.41□□□□□ -0.26
UBXN4-203ENST00000416538 OR5B2Q96R09 309 aa13.41□□□□□ -0.26
UBXN4-203ENST00000416538 KCNK17Q96T54 332 aa13.41□□□□□ -0.26
UBXN4-203ENST00000416538 TMEM204Q9BSN7 226 aa13.41□□□□□ -0.26
UBXN4-203ENST00000416538 CCDC106Q9BWC9 280 aa13.41□□□□□ -0.26
UBXN4-203ENST00000416538 BCO1Q9HAY6 547 aa13.41□□□□□ -0.26
UBXN4-203ENST00000416538 ACER3Q9NUN7 267 aa13.41□□□□□ -0.26
UBXN4-203ENST00000416538 PRSS50Q9UI38 385 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms