RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 CXADRP78310 365 aa12.95□□□□□ -0.34
SF3B1-204ENST00000414963 QPRTQ15274 297 aa12.95□□□□□ -0.34
SF3B1-204ENST00000414963 TOMM34Q15785 309 aaPredicted RBP12.95□□□□□ -0.34
SF3B1-204ENST00000414963 HYAL4Q2M3T9 481 aa12.95□□□□□ -0.34
SF3B1-204ENST00000414963 GLYR1Q49A26 553 aaPredicted RBP12.95□□□□□ -0.34
SF3B1-204ENST00000414963 ZNF766Q5HY98 468 aa12.95□□□□□ -0.34
SF3B1-204ENST00000414963 TMEM179BQ7Z7N9 219 aa12.95□□□□□ -0.34
SF3B1-204ENST00000414963 ATG4DQ86TL0 474 aaPredicted RBP12.95□□□□□ -0.34
SF3B1-204ENST00000414963 HIPK1Q86Z02 1210 aa12.95□□□□□ -0.34
SF3B1-204ENST00000414963 ZDHHC13Q8IUH4 622 aa12.95□□□□□ -0.34
SF3B1-204ENST00000414963 SULF2Q8IWU5 870 aa12.95□□□□□ -0.34
SF3B1-204ENST00000414963 CADM2Q8N3J6 435 aa12.95□□□□□ -0.34
SF3B1-204ENST00000414963 LINC00471Q8N535 108 aa12.95□□□□□ -0.34
SF3B1-204ENST00000414963 CATSPER1Q8NEC5 780 aa12.95□□□□□ -0.34
SF3B1-204ENST00000414963 OR4K17Q8NGC6 315 aa12.95□□□□□ -0.34
SF3B1-204ENST00000414963 ZNF563Q8TA94 476 aa12.95□□□□□ -0.34
SF3B1-204ENST00000414963 SLC7A13Q8TCU3 470 aa12.95□□□□□ -0.34
SF3B1-204ENST00000414963 C3orf49Q96BT1 292 aa12.95□□□□□ -0.34
SF3B1-204ENST00000414963 DTNBP1Q96EV8 351 aa12.95□□□□□ -0.34
SF3B1-204ENST00000414963 PSD2Q9BQI7 771 aa12.95□□□□□ -0.34
SF3B1-204ENST00000414963 ZNF426Q9BUY5 554 aa12.95□□□□□ -0.34
SF3B1-204ENST00000414963 OSBPL10Q9BXB5 764 aa12.95□□□□□ -0.34
SF3B1-204ENST00000414963 MED17Q9NVC6 651 aa12.95□□□□□ -0.34
SF3B1-204ENST00000414963 TUBA8Q9NY65 449 aaPredicted RBP12.95□□□□□ -0.34
SF3B1-204ENST00000414963 TAS2R10Q9NYW0 307 aa12.95□□□□□ -0.34
SF3B1-204ENST00000414963 RPS6KB2Q9UBS0 482 aa12.95□□□□□ -0.34
SF3B1-204ENST00000414963 FBXL2Q9UKC9 423 aa12.95□□□□□ -0.34
SF3B1-204ENST00000414963 SLC7A7Q9UM01 511 aa12.95□□□□□ -0.34
SF3B1-204ENST00000414963 BOKQ9UMX3 212 aaPredicted RBP12.95□□□□□ -0.34
SF3B1-204ENST00000414963 C15orf41Q9Y2V0 281 aa12.95□□□□□ -0.34
SF3B1-204ENST00000414963 ZFHX4Q86UP3 3567 aa12.95□□□□□ -0.34
SF3B1-204ENST00000414963 A0A087WUJ7 227 aa12.94□□□□□ -0.34
SF3B1-204ENST00000414963 TRBV4-1A0A0J9YWV2 114 aa12.94□□□□□ -0.34
SF3B1-204ENST00000414963 SH3PXD2BA1X283 911 aa12.94□□□□□ -0.34
SF3B1-204ENST00000414963 PINLYPA6NC86 204 aa12.94□□□□□ -0.34
SF3B1-204ENST00000414963 ARRDC5A6NEK1 342 aa12.94□□□□□ -0.34
SF3B1-204ENST00000414963 G3V2T6 193 aa12.94□□□□□ -0.34
SF3B1-204ENST00000414963 GNB5O14775 395 aa12.94□□□□□ -0.34
SF3B1-204ENST00000414963 E2F6O75461 281 aa12.94□□□□□ -0.34
SF3B1-204ENST00000414963 GLSO94925 669 aaPredicted RBP12.94□□□□□ -0.34
SF3B1-204ENST00000414963 NUDT14O95848 222 aa12.94□□□□□ -0.34
SF3B1-204ENST00000414963 PRKCAP17252 672 aa12.94□□□□□ -0.34
SF3B1-204ENST00000414963 ADH6P28332 368 aa12.94□□□□□ -0.34
SF3B1-204ENST00000414963 RBM34P42696 430 aaKnown RBP12.94□□□□□ -0.34
SF3B1-204ENST00000414963 MAP2K6P52564 334 aa12.94□□□□□ -0.34
SF3B1-204ENST00000414963 ARHGDIAP52565 204 aa12.94□□□□□ -0.34
SF3B1-204ENST00000414963 IST1P53990 364 aa12.94□□□□□ -0.34
SF3B1-204ENST00000414963 TRIP10Q15642 601 aa12.94□□□□□ -0.34
SF3B1-204ENST00000414963 SNCBQ16143 134 aa12.94□□□□□ -0.34
SF3B1-204ENST00000414963 MICAQ29983 383 aa12.94□□□□□ -0.34
SF3B1-204ENST00000414963 EXOC3L2Q2M3D2 409 aa12.94□□□□□ -0.34
SF3B1-204ENST00000414963 TMEM44Q2T9K0 475 aa12.94□□□□□ -0.34
SF3B1-204ENST00000414963 PLPPR5Q32ZL2 321 aa12.94□□□□□ -0.34
SF3B1-204ENST00000414963 ALG10BQ5I7T1 473 aa12.94□□□□□ -0.34
SF3B1-204ENST00000414963 DCST1Q5T197 706 aa12.94□□□□□ -0.34
SF3B1-204ENST00000414963 OGFRL1Q5TC84 451 aaPredicted RBP12.94□□□□□ -0.34
SF3B1-204ENST00000414963 PODNL1Q6PEZ8 512 aa12.94□□□□□ -0.34
SF3B1-204ENST00000414963 ARSKQ6UWY0 536 aa12.94□□□□□ -0.34
SF3B1-204ENST00000414963 GRINAQ7Z429 371 aa12.94□□□□□ -0.34
SF3B1-204ENST00000414963 RNF113BQ8IZP6 322 aaKnown RBP12.94□□□□□ -0.34
SF3B1-204ENST00000414963 ZFP62Q8NB50 900 aaPredicted RBP12.94□□□□□ -0.34
SF3B1-204ENST00000414963 OR52J3Q8NH60 311 aa12.94□□□□□ -0.34
SF3B1-204ENST00000414963 NRG4Q8WWG1 115 aa12.94□□□□□ -0.34
SF3B1-204ENST00000414963 ACOT11Q8WXI4 607 aaPredicted RBP12.94□□□□□ -0.34
SF3B1-204ENST00000414963 ZBTB8AQ96BR9 441 aa12.94□□□□□ -0.34
SF3B1-204ENST00000414963 MRGPRX4Q96LA9 322 aa12.94□□□□□ -0.34
SF3B1-204ENST00000414963 HS6ST2Q96MM7 605 aa12.94□□□□□ -0.34
SF3B1-204ENST00000414963 GNRHR2Q96P88 292 aa12.94□□□□□ -0.34
SF3B1-204ENST00000414963 ALPK1Q96QP1 1244 aa12.94□□□□□ -0.34
SF3B1-204ENST00000414963 C9orf16Q9BUW7 83 aa12.94□□□□□ -0.34
SF3B1-204ENST00000414963 HES7Q9BYE0 225 aa12.94□□□□□ -0.34
SF3B1-204ENST00000414963 UBQLN3Q9H347 655 aa12.94□□□□□ -0.34
SF3B1-204ENST00000414963 C8orf4Q9NR00 106 aa12.94□□□□□ -0.34
SF3B1-204ENST00000414963 CTPS2Q9NRF8 586 aa12.94□□□□□ -0.34
SF3B1-204ENST00000414963 SELENONQ9NZV5 590 aa12.94□□□□□ -0.34
SF3B1-204ENST00000414963 TUBD1Q9UJT1 453 aa12.94□□□□□ -0.34
SF3B1-204ENST00000414963 TMCC3Q9ULS5 477 aa12.94□□□□□ -0.34
SF3B1-204ENST00000414963 OAZ3Q9UMX2 235 aa12.94□□□□□ -0.34
SF3B1-204ENST00000414963 U3KQV3 271 aa12.94□□□□□ -0.34
SF3B1-204ENST00000414963 NINQ8N4C6 2090 aa12.93□□□□□ -0.34
SF3B1-204ENST00000414963 A0A087WUU8 490 aa12.93□□□□□ -0.34
SF3B1-204ENST00000414963 HTR3EA5X5Y0 456 aa12.93□□□□□ -0.34
SF3B1-204ENST00000414963 FAM47E-STBD1D6RA91 191 aa12.93□□□□□ -0.34
SF3B1-204ENST00000414963 ZIC3O60481 467 aa12.93□□□□□ -0.34
SF3B1-204ENST00000414963 DPP4P27487 766 aa12.93□□□□□ -0.34
SF3B1-204ENST00000414963 TACR3P29371 465 aa12.93□□□□□ -0.34
SF3B1-204ENST00000414963 SRD5A2P31213 254 aa12.93□□□□□ -0.34
SF3B1-204ENST00000414963 APOBEC1P41238 236 aaKnown RBP12.93□□□□□ -0.34
SF3B1-204ENST00000414963 EIF1P41567 113 aaKnown RBP12.93□□□□□ -0.34
SF3B1-204ENST00000414963 ZNF41P51814 821 aaPredicted RBP12.93□□□□□ -0.34
SF3B1-204ENST00000414963 POLR2HP52434 150 aaKnown RBP12.93□□□□□ -0.34
SF3B1-204ENST00000414963 GPR85P60893 370 aa12.93□□□□□ -0.34
SF3B1-204ENST00000414963 SEC23BQ15437 767 aa12.93□□□□□ -0.34
SF3B1-204ENST00000414963 FGD3Q5JSP0 725 aa12.93□□□□□ -0.34
SF3B1-204ENST00000414963 ZNF770Q6IQ21 691 aaPredicted RBP12.93□□□□□ -0.34
SF3B1-204ENST00000414963 PPP4R4Q6NUP7 873 aa12.93□□□□□ -0.34
SF3B1-204ENST00000414963 WDR88Q6ZMY6 472 aa12.93□□□□□ -0.34
SF3B1-204ENST00000414963 Q6ZS92 163 aa12.93□□□□□ -0.34
SF3B1-204ENST00000414963 GALNTL5Q7Z4T8 443 aa12.93□□□□□ -0.34
SF3B1-204ENST00000414963 EPHX4Q8IUS5 362 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms