RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 A4GALTQ9NPC4 353 aa12.21□□□□□ -0.45
RAPGEF1-204ENST00000414781 CD300AQ9UGN4 299 aa12.21□□□□□ -0.45
RAPGEF1-204ENST00000414781 OR10H1Q9Y4A9 318 aa12.21□□□□□ -0.45
RAPGEF1-204ENST00000414781 DSCAMO60469 2012 aa12.21□□□□□ -0.46
RAPGEF1-204ENST00000414781 PRORSD1PA6NEY8 169 aa12.2□□□□□ -0.46
RAPGEF1-204ENST00000414781 FRG2CA6NGY1 282 aa12.2□□□□□ -0.46
RAPGEF1-204ENST00000414781 HMGN4O00479 90 aa12.2□□□□□ -0.46
RAPGEF1-204ENST00000414781 TNFRSF21O75509 655 aa12.2□□□□□ -0.46
RAPGEF1-204ENST00000414781 CIB2O75838 187 aa12.2□□□□□ -0.46
RAPGEF1-204ENST00000414781 IFNA14P01570 189 aa12.2□□□□□ -0.46
RAPGEF1-204ENST00000414781 GUSBP08236 651 aa12.2□□□□□ -0.46
RAPGEF1-204ENST00000414781 RFPL3SP0C7P2 107 aa12.2□□□□□ -0.46
RAPGEF1-204ENST00000414781 OR12D1P0DN82 309 aa12.2□□□□□ -0.46
RAPGEF1-204ENST00000414781 NR2F1P10589 423 aa12.2□□□□□ -0.46
RAPGEF1-204ENST00000414781 PIGAP37287 484 aa12.2□□□□□ -0.46
RAPGEF1-204ENST00000414781 MAP3K8P41279 467 aa12.2□□□□□ -0.46
RAPGEF1-204ENST00000414781 RPS26P62854 115 aaKnown RBP12.2□□□□□ -0.46
RAPGEF1-204ENST00000414781 POU6F2P78424 691 aaPredicted RBP12.2□□□□□ -0.46
RAPGEF1-204ENST00000414781 MRPS22P82650 360 aaKnown RBP12.2□□□□□ -0.46
RAPGEF1-204ENST00000414781 HPCAP84074 193 aa12.2□□□□□ -0.46
RAPGEF1-204ENST00000414781 CDK6Q00534 326 aa12.2□□□□□ -0.46
RAPGEF1-204ENST00000414781 TRAP1Q12931 704 aaKnown RBP12.2□□□□□ -0.46
RAPGEF1-204ENST00000414781 SELPLGQ14242 412 aa12.2□□□□□ -0.46
RAPGEF1-204ENST00000414781 TRIM25Q14258 630 aaKnown RBP12.2□□□□□ -0.46
RAPGEF1-204ENST00000414781 EBPQ15125 230 aaKnown RBP12.2□□□□□ -0.46
RAPGEF1-204ENST00000414781 VMACQ2NL98 169 aa12.2□□□□□ -0.46
RAPGEF1-204ENST00000414781 COX20Q5RI15 118 aa12.2□□□□□ -0.46
RAPGEF1-204ENST00000414781 EXOSC6Q5RKV6 272 aaKnown RBP12.2□□□□□ -0.46
RAPGEF1-204ENST00000414781 C6orf52Q5T4I8 152 aa12.2□□□□□ -0.46
RAPGEF1-204ENST00000414781 PRAMEF8Q5VWM4 474 aa12.2□□□□□ -0.46
RAPGEF1-204ENST00000414781 PRAMEF7Q5VXH5 474 aa12.2□□□□□ -0.46
RAPGEF1-204ENST00000414781 SLC22A10Q63ZE4 541 aa12.2□□□□□ -0.46
RAPGEF1-204ENST00000414781 PGM2L1Q6PCE3 622 aa12.2□□□□□ -0.46
RAPGEF1-204ENST00000414781 SLC44A2Q8IWA5 706 aaPredicted RBP12.2□□□□□ -0.46
RAPGEF1-204ENST00000414781 C10orf67Q8IYJ2 551 aa12.2□□□□□ -0.46
RAPGEF1-204ENST00000414781 MICU2Q8IYU8 434 aa12.2□□□□□ -0.46
RAPGEF1-204ENST00000414781 SLC15A4Q8N697 577 aa12.2□□□□□ -0.46
RAPGEF1-204ENST00000414781 SLC35A4Q96G79 324 aa12.2□□□□□ -0.46
RAPGEF1-204ENST00000414781 WFIKKN1Q96NZ8 548 aa12.2□□□□□ -0.46
RAPGEF1-204ENST00000414781 TRNT1Q96Q11 434 aaKnown RBP12.2□□□□□ -0.46
RAPGEF1-204ENST00000414781 GAL3ST4Q96RP7 486 aa12.2□□□□□ -0.46
RAPGEF1-204ENST00000414781 TM9SF2Q99805 663 aa12.2□□□□□ -0.46
RAPGEF1-204ENST00000414781 G6PC3Q9BUM1 346 aa12.2□□□□□ -0.46
RAPGEF1-204ENST00000414781 WWTR1Q9GZV5 400 aa12.2□□□□□ -0.46
RAPGEF1-204ENST00000414781 LIN28AQ9H9Z2 209 aaKnown RBP12.2□□□□□ -0.46
RAPGEF1-204ENST00000414781 CACYBPQ9HB71 228 aaKnown RBP12.2□□□□□ -0.46
RAPGEF1-204ENST00000414781 CAMK2AQ9UQM7 478 aa12.2□□□□□ -0.46
RAPGEF1-204ENST00000414781 ANGPT4Q9Y264 503 aa12.2□□□□□ -0.46
RAPGEF1-204ENST00000414781 LRRC3CA6NJW4 275 aa12.19□□□□□ -0.46
RAPGEF1-204ENST00000414781 A8MXE2 369 aa12.19□□□□□ -0.46
RAPGEF1-204ENST00000414781 TO15178 435 aa12.19□□□□□ -0.46
RAPGEF1-204ENST00000414781 CLPSP04118 112 aa12.19□□□□□ -0.46
RAPGEF1-204ENST00000414781 TFPTP0C1Z6 253 aa12.19□□□□□ -0.46
RAPGEF1-204ENST00000414781 ARAFP10398 606 aa12.19□□□□□ -0.46
RAPGEF1-204ENST00000414781 NAGAP17050 411 aa12.19□□□□□ -0.46
RAPGEF1-204ENST00000414781 ATP6V1C1P21283 382 aa12.19□□□□□ -0.46
RAPGEF1-204ENST00000414781 LCN1P31025 176 aa12.19□□□□□ -0.46
RAPGEF1-204ENST00000414781 PCGF2P35227 344 aa12.19□□□□□ -0.46
RAPGEF1-204ENST00000414781 KRT20P35900 424 aa12.19□□□□□ -0.46
RAPGEF1-204ENST00000414781 GZMMP51124 257 aa12.19□□□□□ -0.46
RAPGEF1-204ENST00000414781 CRISP3P54108 245 aa12.19□□□□□ -0.46
RAPGEF1-204ENST00000414781 CASP9P55211 416 aa12.19□□□□□ -0.46
RAPGEF1-204ENST00000414781 PSG6Q00889 435 aa12.19□□□□□ -0.46
RAPGEF1-204ENST00000414781 CEACAM7Q14002 265 aa12.19□□□□□ -0.46
RAPGEF1-204ENST00000414781 DUSP5Q16690 384 aa12.19□□□□□ -0.46
RAPGEF1-204ENST00000414781 DECR1Q16698 335 aa12.19□□□□□ -0.46
RAPGEF1-204ENST00000414781 ARHGAP11BQ3KRB8 267 aa12.19□□□□□ -0.46
RAPGEF1-204ENST00000414781 LIPNQ5VXI9 398 aa12.19□□□□□ -0.46
RAPGEF1-204ENST00000414781 REEP3Q6NUK4 255 aa12.19□□□□□ -0.46
RAPGEF1-204ENST00000414781 KRT73Q86Y46 540 aa12.19□□□□□ -0.46
RAPGEF1-204ENST00000414781 C9orf40Q8IXQ3 194 aa12.19□□□□□ -0.46
RAPGEF1-204ENST00000414781 ZNF321PQ8N8H1 164 aa12.19□□□□□ -0.46
RAPGEF1-204ENST00000414781 C9orf106Q8NAJ2 232 aa12.19□□□□□ -0.46
RAPGEF1-204ENST00000414781 HIPK4Q8NE63 616 aa12.19□□□□□ -0.46
RAPGEF1-204ENST00000414781 OR5D16Q8NGK9 328 aa12.19□□□□□ -0.46
RAPGEF1-204ENST00000414781 SLC22A8Q8TCC7 542 aa12.19□□□□□ -0.46
RAPGEF1-204ENST00000414781 RAB8BQ92930 207 aa12.19□□□□□ -0.46
RAPGEF1-204ENST00000414781 ADIPOR1Q96A54 375 aa12.19□□□□□ -0.46
RAPGEF1-204ENST00000414781 TRMT61AQ96FX7 289 aaKnown RBP12.19□□□□□ -0.46
RAPGEF1-204ENST00000414781 SPATA5L1Q9BVQ7 753 aa12.19□□□□□ -0.46
RAPGEF1-204ENST00000414781 ITPAQ9BY32 194 aa12.19□□□□□ -0.46
RAPGEF1-204ENST00000414781 ANGPTL4Q9BY76 406 aa12.19□□□□□ -0.46
RAPGEF1-204ENST00000414781 TRIM15Q9C019 465 aa12.19□□□□□ -0.46
RAPGEF1-204ENST00000414781 PIF1Q9H611 641 aa12.19□□□□□ -0.46
RAPGEF1-204ENST00000414781 POLE3Q9NRF9 147 aa12.19□□□□□ -0.46
RAPGEF1-204ENST00000414781 KLHL28Q9NXS3 571 aa12.19□□□□□ -0.46
RAPGEF1-204ENST00000414781 MAGEL2Q9UJ55 1249 aa12.19□□□□□ -0.46
RAPGEF1-204ENST00000414781 PACSIN3Q9UKS6 424 aa12.19□□□□□ -0.46
RAPGEF1-204ENST00000414781 PKD1L1Q8TDX9 2849 aa12.18□□□□□ -0.46
RAPGEF1-204ENST00000414781 A0A0G2JPF8 293 aa12.18□□□□□ -0.46
RAPGEF1-204ENST00000414781 HNRNPCL2B2RXH8 293 aa12.18□□□□□ -0.46
RAPGEF1-204ENST00000414781 HNRNPCL3B7ZW38 293 aa12.18□□□□□ -0.46
RAPGEF1-204ENST00000414781 STX11O75558 287 aa12.18□□□□□ -0.46
RAPGEF1-204ENST00000414781 SERPINB7O75635 380 aa12.18□□□□□ -0.46
RAPGEF1-204ENST00000414781 HNRNPCL4P0DMR1 293 aa12.18□□□□□ -0.46
RAPGEF1-204ENST00000414781 CT45A8P0DMV1 189 aa12.18□□□□□ -0.46
RAPGEF1-204ENST00000414781 CT45A9P0DMV2 189 aa12.18□□□□□ -0.46
RAPGEF1-204ENST00000414781 ACP2P11117 423 aa12.18□□□□□ -0.46
RAPGEF1-204ENST00000414781 NQO1P15559 274 aaKnown RBP12.18□□□□□ -0.46
RAPGEF1-204ENST00000414781 TCN1P20061 433 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms