RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 Q6ZT83 130 aa8.44□□□□□ -1.06
RFFL-203ENST00000413582 MEX3DQ86XN8 651 aaKnown RBP8.44□□□□□ -1.06
RFFL-203ENST00000413582 ZNF781Q8N8C0 355 aa8.44□□□□□ -1.06
RFFL-203ENST00000413582 CDYL2Q8N8U2 506 aa8.44□□□□□ -1.06
RFFL-203ENST00000413582 GATSQ8NAP1 163 aa8.44□□□□□ -1.06
RFFL-203ENST00000413582 ACTRT2Q8TDY3 377 aa8.44□□□□□ -1.06
RFFL-203ENST00000413582 PROX1Q92786 737 aa8.44□□□□□ -1.06
RFFL-203ENST00000413582 HOXB13Q92826 284 aaPredicted RBP8.44□□□□□ -1.06
RFFL-203ENST00000413582 CPNE4Q96A23 557 aaPredicted RBP8.44□□□□□ -1.06
RFFL-203ENST00000413582 APIPQ96GX9 242 aa8.44□□□□□ -1.06
RFFL-203ENST00000413582 REXO5Q96IC2 774 aaKnown RBP8.44□□□□□ -1.06
RFFL-203ENST00000413582 ELAC2Q9BQ52 826 aaKnown RBP8.44□□□□□ -1.06
RFFL-203ENST00000413582 EBPLQ9BY08 206 aa8.44□□□□□ -1.06
RFFL-203ENST00000413582 ACPTQ9BZG2 426 aa8.44□□□□□ -1.06
RFFL-203ENST00000413582 PLA2G12AQ9BZM1 189 aa8.44□□□□□ -1.06
RFFL-203ENST00000413582 COQ10BQ9H8M1 238 aa8.44□□□□□ -1.06
RFFL-203ENST00000413582 MID1IP1Q9NPA3 183 aa8.44□□□□□ -1.06
RFFL-203ENST00000413582 MRGBPQ9NV56 204 aa8.44□□□□□ -1.06
RFFL-203ENST00000413582 ING1Q9UK53 422 aaPredicted RBP8.44□□□□□ -1.06
RFFL-203ENST00000413582 USH1CQ9Y6N9 552 aa8.44□□□□□ -1.06
RFFL-203ENST00000413582 VWC2LB2RUY7 222 aa8.43□□□□□ -1.06
RFFL-203ENST00000413582 ZNF195O14628 629 aa8.43□□□□□ -1.06
RFFL-203ENST00000413582 SPRY1O43609 319 aaPredicted RBP8.43□□□□□ -1.06
RFFL-203ENST00000413582 KCNH1O95259 989 aa8.43□□□□□ -1.06
RFFL-203ENST00000413582 COX5AP20674 150 aa8.43□□□□□ -1.06
RFFL-203ENST00000413582 DDCP20711 480 aa8.43□□□□□ -1.06
RFFL-203ENST00000413582 EDNRAP25101 427 aa8.43□□□□□ -1.06
RFFL-203ENST00000413582 ELK4P28324 431 aa8.43□□□□□ -1.06
RFFL-203ENST00000413582 GABRA3P34903 492 aa8.43□□□□□ -1.06
RFFL-203ENST00000413582 OR3A2P47893 321 aa8.43□□□□□ -1.06
RFFL-203ENST00000413582 ARFIP2P53365 341 aa8.43□□□□□ -1.06
RFFL-203ENST00000413582 MANFP55145 182 aaKnown RBP8.43□□□□□ -1.06
RFFL-203ENST00000413582 LSM11P83369 360 aaKnown RBP eCLIP8.43□□□□□ -1.06
RFFL-203ENST00000413582 ACSM2AQ08AH3 577 aa8.43□□□□□ -1.06
RFFL-203ENST00000413582 FOXF1Q12946 379 aa8.43□□□□□ -1.06
RFFL-203ENST00000413582 RAB35Q15286 201 aa8.43□□□□□ -1.06
RFFL-203ENST00000413582 ZNHIT3Q15649 155 aaPredicted RBP8.43□□□□□ -1.06
RFFL-203ENST00000413582 UGT3A2Q3SY77 523 aa8.43□□□□□ -1.06
RFFL-203ENST00000413582 SPIN4Q56A73 249 aa8.43□□□□□ -1.06
RFFL-203ENST00000413582 TIMM23BQ5SRD1 257 aa8.43□□□□□ -1.06
RFFL-203ENST00000413582 LIPNQ5VXI9 398 aa8.43□□□□□ -1.06
RFFL-203ENST00000413582 METTL21CQ5VZV1 264 aa8.43□□□□□ -1.06
RFFL-203ENST00000413582 KANK2Q63ZY3 851 aa8.43□□□□□ -1.06
RFFL-203ENST00000413582 ACSM2BQ68CK6 577 aa8.43□□□□□ -1.06
RFFL-203ENST00000413582 CGB2Q6NT52 195 aa8.43□□□□□ -1.06
RFFL-203ENST00000413582 GALNT18Q6P9A2 607 aa8.43□□□□□ -1.06
RFFL-203ENST00000413582 Q6ZSR9 355 aa8.43□□□□□ -1.06
RFFL-203ENST00000413582 FCRLAQ7L513 359 aa8.43□□□□□ -1.06
RFFL-203ENST00000413582 SSX8Q7RTT4 187 aa8.43□□□□□ -1.06
RFFL-203ENST00000413582 LILRA2Q8N149 483 aa8.43□□□□□ -1.06
RFFL-203ENST00000413582 MUC15Q8N387 334 aa8.43□□□□□ -1.06
RFFL-203ENST00000413582 CCDC197Q8NCU1 140 aa8.43□□□□□ -1.06
RFFL-203ENST00000413582 OR4C3Q8NH37 302 aa8.43□□□□□ -1.06
RFFL-203ENST00000413582 METTL6Q8TCB7 284 aa8.43□□□□□ -1.06
RFFL-203ENST00000413582 PIK3R3Q92569 461 aa8.43□□□□□ -1.06
RFFL-203ENST00000413582 MSI2Q96DH6 328 aaKnown RBP8.43□□□□□ -1.06
RFFL-203ENST00000413582 SH3YL1Q96HL8 342 aaPredicted RBP8.43□□□□□ -1.06
RFFL-203ENST00000413582 RADILQ96JH8 1075 aa8.43□□□□□ -1.06
RFFL-203ENST00000413582 DHRS9Q9BPW9 319 aa8.43□□□□□ -1.06
RFFL-203ENST00000413582 CCDC28BQ9BUN5 200 aa8.43□□□□□ -1.06
RFFL-203ENST00000413582 GLIPR2Q9H4G4 154 aa8.43□□□□□ -1.06
RFFL-203ENST00000413582 CXorf36Q9H7Y0 433 aa8.43□□□□□ -1.06
RFFL-203ENST00000413582 HHATLQ9HCP6 504 aa8.43□□□□□ -1.06
RFFL-203ENST00000413582 PNPOQ9NVS9 261 aa8.43□□□□□ -1.06
RFFL-203ENST00000413582 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.43□□□□□ -1.06
RFFL-203ENST00000413582 PRSS50Q9UI38 385 aa8.43□□□□□ -1.06
RFFL-203ENST00000413582 ARL2BPQ9Y2Y0 163 aa8.43□□□□□ -1.06
RFFL-203ENST00000413582 TIMM22Q9Y584 194 aa8.43□□□□□ -1.06
RFFL-203ENST00000413582 LOC100289279A0A1B0GTE1 492 aa8.42□□□□□ -1.06
RFFL-203ENST00000413582 OR5H1A6NKK0 313 aa8.42□□□□□ -1.06
RFFL-203ENST00000413582 TTC36A6NLP5 189 aa8.42□□□□□ -1.06
RFFL-203ENST00000413582 NPIPB8E9PQR5 432 aa8.42□□□□□ -1.06
RFFL-203ENST00000413582 EFNA2O43921 213 aa8.42□□□□□ -1.06
RFFL-203ENST00000413582 CRCPO75575 148 aa8.42□□□□□ -1.06
RFFL-203ENST00000413582 LY6HO94772 140 aa8.42□□□□□ -1.06
RFFL-203ENST00000413582 PRKD3O94806 890 aa8.42□□□□□ -1.06
RFFL-203ENST00000413582 PGM3O95394 542 aa8.42□□□□□ -1.06
RFFL-203ENST00000413582 KRT6AP02538 564 aa8.42□□□□□ -1.06
RFFL-203ENST00000413582 KRT6BP04259 564 aa8.42□□□□□ -1.06
RFFL-203ENST00000413582 YES1P07947 543 aa8.42□□□□□ -1.06
RFFL-203ENST00000413582 IFI6P09912 130 aa8.42□□□□□ -1.06
RFFL-203ENST00000413582 LINGO3P0C6S8 592 aa8.42□□□□□ -1.06
RFFL-203ENST00000413582 HNF1AP20823 631 aa8.42□□□□□ -1.06
RFFL-203ENST00000413582 IGHV1-2P23083 117 aa8.42□□□□□ -1.06
RFFL-203ENST00000413582 HMOX2P30519 316 aa8.42□□□□□ -1.06
RFFL-203ENST00000413582 NTSP30990 170 aa8.42□□□□□ -1.06
RFFL-203ENST00000413582 MAP3K8P41279 467 aa8.42□□□□□ -1.06
RFFL-203ENST00000413582 GSTM5P46439 218 aa8.42□□□□□ -1.06
RFFL-203ENST00000413582 KRT6CP48668 564 aa8.42□□□□□ -1.06
RFFL-203ENST00000413582 PRIM2P49643 509 aa8.42□□□□□ -1.06
RFFL-203ENST00000413582 EFNA4P52798 201 aa8.42□□□□□ -1.06
RFFL-203ENST00000413582 ZNF763Q0D2J5 394 aa8.42□□□□□ -1.06
RFFL-203ENST00000413582 GGTLC2Q14390 218 aa8.42□□□□□ -1.06
RFFL-203ENST00000413582 SQLEQ14534 574 aa8.42□□□□□ -1.06
RFFL-203ENST00000413582 CD226Q15762 336 aa8.42□□□□□ -1.06
RFFL-203ENST00000413582 SMU1Q2TAY7 513 aa8.42□□□□□ -1.06
RFFL-203ENST00000413582 CLEC6AQ6EIG7 209 aa8.42□□□□□ -1.06
RFFL-203ENST00000413582 SLC22A25Q6T423 547 aa8.42□□□□□ -1.06
RFFL-203ENST00000413582 EPGNQ6UW88 154 aa8.42□□□□□ -1.06
RFFL-203ENST00000413582 ZAR1Q86SH2 424 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms