RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 RELTQ969Z4 430 aa11.37□□□□□ -0.59
CHMP3-204ENST00000409727 KIAA1143Q96AT1 154 aaPredicted RBP11.37□□□□□ -0.59
CHMP3-204ENST00000409727 C3orf49Q96BT1 292 aa11.37□□□□□ -0.59
CHMP3-204ENST00000409727 THOC3Q96J01 351 aaKnown RBP11.37□□□□□ -0.59
CHMP3-204ENST00000409727 HRASLS5Q96KN8 279 aa11.37□□□□□ -0.59
CHMP3-204ENST00000409727 KRCC1Q9NPI7 259 aaPredicted RBP11.37□□□□□ -0.59
CHMP3-204ENST00000409727 ICAM5Q9UMF0 924 aa11.37□□□□□ -0.59
CHMP3-204ENST00000409727 YARS2Q9Y2Z4 477 aaKnown RBP11.37□□□□□ -0.59
CHMP3-204ENST00000409727 MED31Q9Y3C7 131 aa11.37□□□□□ -0.59
CHMP3-204ENST00000409727 PTPRZ1P23471 2315 aaPredicted RBP11.37□□□□□ -0.59
CHMP3-204ENST00000409727 EXPH5Q8NEV8 1989 aa11.37□□□□□ -0.59
CHMP3-204ENST00000409727 CDC42EP2O14613 210 aa11.36□□□□□ -0.59
CHMP3-204ENST00000409727 LIFP15018 202 aa11.36□□□□□ -0.59
CHMP3-204ENST00000409727 MAKP20794 623 aa11.36□□□□□ -0.59
CHMP3-204ENST00000409727 MST1P26927 711 aa11.36□□□□□ -0.59
CHMP3-204ENST00000409727 MLF1P58340 268 aa11.36□□□□□ -0.59
CHMP3-204ENST00000409727 ISL1P61371 349 aa11.36□□□□□ -0.59
CHMP3-204ENST00000409727 ESRRGP62508 458 aa11.36□□□□□ -0.59
CHMP3-204ENST00000409727 SRSF6Q13247 344 aaKnown RBP11.36□□□□□ -0.59
CHMP3-204ENST00000409727 IL18R1Q13478 541 aa11.36□□□□□ -0.59
CHMP3-204ENST00000409727 CBFBQ13951 182 aa11.36□□□□□ -0.59
CHMP3-204ENST00000409727 NTRK2Q16620 822 aa11.36□□□□□ -0.59
CHMP3-204ENST00000409727 RSPO4Q2I0M5 234 aaPredicted RBP11.36□□□□□ -0.59
CHMP3-204ENST00000409727 ZNF791Q3KP31 576 aaPredicted RBP11.36□□□□□ -0.59
CHMP3-204ENST00000409727 CLEC12AQ5QGZ9 265 aa11.36□□□□□ -0.59
CHMP3-204ENST00000409727 KIF18BQ86Y91 864 aa11.36□□□□□ -0.59
CHMP3-204ENST00000409727 SLC15A4Q8N697 577 aa11.36□□□□□ -0.59
CHMP3-204ENST00000409727 SETD9Q8NE22 299 aa11.36□□□□□ -0.59
CHMP3-204ENST00000409727 TTC9Q92623 222 aa11.36□□□□□ -0.59
CHMP3-204ENST00000409727 BPIFA2Q96DR5 249 aa11.36□□□□□ -0.59
CHMP3-204ENST00000409727 PITX2Q99697 317 aa11.36□□□□□ -0.59
CHMP3-204ENST00000409727 PLA2G12AQ9BZM1 189 aa11.36□□□□□ -0.59
CHMP3-204ENST00000409727 MEPEQ9NQ76 525 aaPredicted RBP11.36□□□□□ -0.59
CHMP3-204ENST00000409727 MED11Q9P086 117 aa11.36□□□□□ -0.59
CHMP3-204ENST00000409727 IL20RAQ9UHF4 553 aa11.36□□□□□ -0.59
CHMP3-204ENST00000409727 ENOPH1Q9UHY7 261 aa11.36□□□□□ -0.59
CHMP3-204ENST00000409727 SCOCQ9UIL1 159 aa11.36□□□□□ -0.59
CHMP3-204ENST00000409727 MYRFQ9Y2G1 1151 aa11.36□□□□□ -0.59
CHMP3-204ENST00000409727 ELOA3DA6NLF2 546 aaPredicted RBP11.36□□□□□ -0.59
CHMP3-204ENST00000409727 ADAM10O14672 748 aa11.36□□□□□ -0.59
CHMP3-204ENST00000409727 EIF4E2O60573 245 aaKnown RBP11.36□□□□□ -0.59
CHMP3-204ENST00000409727 WISP1O95388 367 aa11.36□□□□□ -0.59
CHMP3-204ENST00000409727 F10P00742 488 aa11.36□□□□□ -0.59
CHMP3-204ENST00000409727 TP53P04637 393 aaPredicted RBP11.36□□□□□ -0.59
CHMP3-204ENST00000409727 SAGP10523 405 aaPredicted RBP11.36□□□□□ -0.59
CHMP3-204ENST00000409727 ATP6V1B1P15313 513 aa11.36□□□□□ -0.59
CHMP3-204ENST00000409727 GSTM3P21266 225 aa11.36□□□□□ -0.59
CHMP3-204ENST00000409727 TACR3P29371 465 aa11.36□□□□□ -0.59
CHMP3-204ENST00000409727 FMO3P31513 532 aa11.36□□□□□ -0.59
CHMP3-204ENST00000409727 GGT2P36268 569 aa11.36□□□□□ -0.59
CHMP3-204ENST00000409727 SLC6A8P48029 635 aa11.36□□□□□ -0.59
CHMP3-204ENST00000409727 P2RX1P51575 399 aa11.36□□□□□ -0.59
CHMP3-204ENST00000409727 CDH15P55291 814 aa11.36□□□□□ -0.59
CHMP3-204ENST00000409727 CRYZQ08257 329 aaKnown RBP11.36□□□□□ -0.59
CHMP3-204ENST00000409727 TSPAN31Q12999 210 aa11.36□□□□□ -0.59
CHMP3-204ENST00000409727 ELOA3BQ3SY89 546 aa11.36□□□□□ -0.59
CHMP3-204ENST00000409727 OPN5Q6U736 354 aa11.36□□□□□ -0.59
CHMP3-204ENST00000409727 DTX1Q86Y01 620 aa11.36□□□□□ -0.59
CHMP3-204ENST00000409727 ELOA3Q8NG57 546 aa11.36□□□□□ -0.59
CHMP3-204ENST00000409727 OR5W2Q8NH69 310 aa11.36□□□□□ -0.59
CHMP3-204ENST00000409727 ADAMTS17Q8TE56 1095 aa11.36□□□□□ -0.59
CHMP3-204ENST00000409727 DNAJA4Q8WW22 397 aaPredicted RBP11.36□□□□□ -0.59
CHMP3-204ENST00000409727 DNAJA3Q96EY1 480 aa11.36□□□□□ -0.59
CHMP3-204ENST00000409727 MPP4Q96JB8 637 aa11.36□□□□□ -0.59
CHMP3-204ENST00000409727 IMPAD1Q9NX62 359 aa11.36□□□□□ -0.59
CHMP3-204ENST00000409727 PPP4R1LQ9P1A2 415 aa11.36□□□□□ -0.59
CHMP3-204ENST00000409727 HRH3Q9Y5N1 445 aa11.36□□□□□ -0.59
CHMP3-204ENST00000409727 CEP250Q9BV73 2442 aa11.35□□□□□ -0.59
CHMP3-204ENST00000409727 A0A087WUJ7 227 aa11.35□□□□□ -0.59
CHMP3-204ENST00000409727 ZAR1LA6NP61 321 aa11.35□□□□□ -0.59
CHMP3-204ENST00000409727 B4DXG7 233 aa11.35□□□□□ -0.59
CHMP3-204ENST00000409727 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.35□□□□□ -0.59
CHMP3-204ENST00000409727 G3V3Y1 287 aa11.35□□□□□ -0.59
CHMP3-204ENST00000409727 TP53I11O14683 189 aa11.35□□□□□ -0.59
CHMP3-204ENST00000409727 SERPINA7P05543 415 aa11.35□□□□□ -0.59
CHMP3-204ENST00000409727 PGCP20142 388 aa11.35□□□□□ -0.59
CHMP3-204ENST00000409727 ENDOUP21128 410 aaKnown RBP11.35□□□□□ -0.59
CHMP3-204ENST00000409727 TCEA1P23193 301 aaKnown RBP11.35□□□□□ -0.59
CHMP3-204ENST00000409727 FPR3P25089 353 aa11.35□□□□□ -0.59
CHMP3-204ENST00000409727 ITGA3P26006 1051 aa11.35□□□□□ -0.59
CHMP3-204ENST00000409727 CASP3P42574 277 aa11.35□□□□□ -0.59
CHMP3-204ENST00000409727 C17orf67Q0P5P2 114 aa11.35□□□□□ -0.59
CHMP3-204ENST00000409727 COX10Q12887 443 aa11.35□□□□□ -0.59
CHMP3-204ENST00000409727 QPRTQ15274 297 aa11.35□□□□□ -0.59
CHMP3-204ENST00000409727 INPP5JQ15735 1006 aaPredicted RBP11.35□□□□□ -0.59
CHMP3-204ENST00000409727 ZNF468Q5VIY5 522 aaPredicted RBP11.35□□□□□ -0.59
CHMP3-204ENST00000409727 ENTHD1Q8IYW4 607 aa11.35□□□□□ -0.59
CHMP3-204ENST00000409727 CDK20Q8IZL9 346 aa11.35□□□□□ -0.59
CHMP3-204ENST00000409727 RNF113BQ8IZP6 322 aaKnown RBP11.35□□□□□ -0.59
CHMP3-204ENST00000409727 OR13C2Q8NGS9 318 aa11.35□□□□□ -0.59
CHMP3-204ENST00000409727 NACC2Q96BF6 587 aa11.35□□□□□ -0.59
CHMP3-204ENST00000409727 HS6ST2Q96MM7 605 aa11.35□□□□□ -0.59
CHMP3-204ENST00000409727 HPF1Q9NWY4 346 aa11.35□□□□□ -0.59
CHMP3-204ENST00000409727 RNF6Q9Y252 685 aa11.35□□□□□ -0.59
CHMP3-204ENST00000409727 CHCHD2Q9Y6H1 151 aaPredicted RBP11.35□□□□□ -0.59
CHMP3-204ENST00000409727 UNC119BA6NIH7 251 aa11.34□□□□□ -0.59
CHMP3-204ENST00000409727 ENO4A6NNW6 628 aa11.34□□□□□ -0.59
CHMP3-204ENST00000409727 LRRN3E7EW58 273 aa11.34□□□□□ -0.59
CHMP3-204ENST00000409727 E9PQ18 207 aa11.34□□□□□ -0.59
CHMP3-204ENST00000409727 KLF4O43474 513 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms