RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 ACER3Q9NUN7 267 aa17.88■□□□□ 0.45
PDLIM2-207ENST00000409417 PRDM4Q9UKN5 801 aa17.88■□□□□ 0.45
PDLIM2-207ENST00000409417 ANGPT4Q9Y264 503 aa17.88■□□□□ 0.45
PDLIM2-207ENST00000409417 CHST2Q9Y4C5 530 aa17.88■□□□□ 0.45
PDLIM2-207ENST00000409417 A0A0G2JNJ9 132 aa17.87■□□□□ 0.45
PDLIM2-207ENST00000409417 MBD3L4A6NDZ8 208 aaPredicted RBP17.87■□□□□ 0.45
PDLIM2-207ENST00000409417 MBD3L3A6NE82 208 aaPredicted RBP17.87■□□□□ 0.45
PDLIM2-207ENST00000409417 MBD3L5A6NJ08 208 aaPredicted RBP17.87■□□□□ 0.45
PDLIM2-207ENST00000409417 FAAHO00519 579 aa17.87■□□□□ 0.45
PDLIM2-207ENST00000409417 AIM2O14862 343 aa17.87■□□□□ 0.45
PDLIM2-207ENST00000409417 ADAMDEC1O15204 470 aa17.87■□□□□ 0.45
PDLIM2-207ENST00000409417 EFNA2O43921 213 aa17.87■□□□□ 0.45
PDLIM2-207ENST00000409417 CLDN1O95832 211 aa17.87■□□□□ 0.45
PDLIM2-207ENST00000409417 FAM107AO95990 144 aa17.87■□□□□ 0.45
PDLIM2-207ENST00000409417 IL11P20809 199 aa17.87■□□□□ 0.45
PDLIM2-207ENST00000409417 PRDX6P30041 224 aa17.87■□□□□ 0.45
PDLIM2-207ENST00000409417 PRKAR1BP31321 381 aa17.87■□□□□ 0.45
PDLIM2-207ENST00000409417 CEACAM8P31997 349 aaPredicted RBP17.87■□□□□ 0.45
PDLIM2-207ENST00000409417 GZMMP51124 257 aa17.87■□□□□ 0.45
PDLIM2-207ENST00000409417 CCDC71Q8IV32 467 aaPredicted RBP17.87■□□□□ 0.45
PDLIM2-207ENST00000409417 SLC30A8Q8IWU4 369 aa17.87■□□□□ 0.45
PDLIM2-207ENST00000409417 ZZZ3Q8IYH5 903 aa17.87■□□□□ 0.45
PDLIM2-207ENST00000409417 LILRA2Q8N149 483 aa17.87■□□□□ 0.45
PDLIM2-207ENST00000409417 ANKS4BQ8N8V4 417 aa17.87■□□□□ 0.45
PDLIM2-207ENST00000409417 MBD3L2Q8NHZ7 208 aaPredicted RBP17.87■□□□□ 0.45
PDLIM2-207ENST00000409417 ZNF563Q8TA94 476 aa17.87■□□□□ 0.45
PDLIM2-207ENST00000409417 CA5BP1Q8WTZ4 195 aa17.87■□□□□ 0.45
PDLIM2-207ENST00000409417 LRRC37BQ96QE4 947 aa17.87■□□□□ 0.45
PDLIM2-207ENST00000409417 TMEM185BQ9H7F4 350 aa17.87■□□□□ 0.45
PDLIM2-207ENST00000409417 CLCF1Q9UBD9 225 aa17.87■□□□□ 0.45
PDLIM2-207ENST00000409417 Q9UFV3 132 aa17.87■□□□□ 0.45
PDLIM2-207ENST00000409417 A1L4Q6 167 aa17.86■□□□□ 0.45
PDLIM2-207ENST00000409417 HSPB2A8KAH6 182 aa17.86■□□□□ 0.45
PDLIM2-207ENST00000409417 SERPINB7O75635 380 aa17.86■□□□□ 0.45
PDLIM2-207ENST00000409417 CLDN14O95500 239 aa17.86■□□□□ 0.45
PDLIM2-207ENST00000409417 IL2RAP01589 272 aa17.86■□□□□ 0.45
PDLIM2-207ENST00000409417 UQCRBP14927 111 aa17.86■□□□□ 0.45
PDLIM2-207ENST00000409417 AQP1P29972 269 aa17.86■□□□□ 0.45
PDLIM2-207ENST00000409417 PCGF2P35227 344 aa17.86■□□□□ 0.45
PDLIM2-207ENST00000409417 PCBP3P57721 371 aaKnown RBP17.86■□□□□ 0.45
PDLIM2-207ENST00000409417 RPS3AP61247 264 aaKnown RBP17.86■□□□□ 0.45
PDLIM2-207ENST00000409417 EPS8Q12929 822 aa17.86■□□□□ 0.45
PDLIM2-207ENST00000409417 CDSNQ15517 529 aa17.86■□□□□ 0.45
PDLIM2-207ENST00000409417 HSPB2Q16082 182 aa17.86■□□□□ 0.45
PDLIM2-207ENST00000409417 CTU2Q2VPK5 515 aaKnown RBP17.86■□□□□ 0.45
PDLIM2-207ENST00000409417 ESPNLQ6ZVH7 1005 aa17.86■□□□□ 0.45
PDLIM2-207ENST00000409417 MAMDC2Q7Z304 686 aaPredicted RBP17.86■□□□□ 0.45
PDLIM2-207ENST00000409417 CALHM3Q86XJ0 350 aa17.86■□□□□ 0.45
PDLIM2-207ENST00000409417 TNIP2Q8NFZ5 429 aa17.86■□□□□ 0.45
PDLIM2-207ENST00000409417 LILRB4Q8NHJ6 448 aa17.86■□□□□ 0.45
PDLIM2-207ENST00000409417 SLC35B4Q969S0 331 aa17.86■□□□□ 0.45
PDLIM2-207ENST00000409417 ADGRG7Q96K78 797 aa17.86■□□□□ 0.45
PDLIM2-207ENST00000409417 TM9SF2Q99805 663 aa17.86■□□□□ 0.45
PDLIM2-207ENST00000409417 PRORSD1PA6NEY8 169 aa17.85■□□□□ 0.45
PDLIM2-207ENST00000409417 GJE1A6NN92 205 aa17.85■□□□□ 0.45
PDLIM2-207ENST00000409417 EIF1AYO14602 144 aaKnown RBP17.85■□□□□ 0.45
PDLIM2-207ENST00000409417 DCTN3O75935 186 aa17.85■□□□□ 0.45
PDLIM2-207ENST00000409417 OPN1LWP04000 364 aa17.85■□□□□ 0.45
PDLIM2-207ENST00000409417 GP1BBP13224 206 aa17.85■□□□□ 0.45
PDLIM2-207ENST00000409417 IDH2P48735 452 aaKnown RBP17.85■□□□□ 0.45
PDLIM2-207ENST00000409417 MERTKQ12866 999 aa17.85■□□□□ 0.45
PDLIM2-207ENST00000409417 SELENBP1Q13228 472 aa17.85■□□□□ 0.45
PDLIM2-207ENST00000409417 GKAP1Q5VSY0 366 aaPredicted RBP17.85■□□□□ 0.45
PDLIM2-207ENST00000409417 DHRS4L2Q6PKH6 230 aa17.85■□□□□ 0.45
PDLIM2-207ENST00000409417 PLEKHM3Q6ZWE6 761 aa17.85■□□□□ 0.45
PDLIM2-207ENST00000409417 ZNF550Q7Z398 422 aa17.85■□□□□ 0.45
PDLIM2-207ENST00000409417 GRINAQ7Z429 371 aa17.85■□□□□ 0.45
PDLIM2-207ENST00000409417 ARPINQ7Z6K5 226 aa17.85■□□□□ 0.45
PDLIM2-207ENST00000409417 REXO5Q96IC2 774 aaKnown RBP17.85■□□□□ 0.45
PDLIM2-207ENST00000409417 KLHL15Q96M94 604 aa17.85■□□□□ 0.45
PDLIM2-207ENST00000409417 GPATCH1Q9BRR8 931 aaKnown RBP17.85■□□□□ 0.45
PDLIM2-207ENST00000409417 PINK1Q9BXM7 581 aa17.85■□□□□ 0.45
PDLIM2-207ENST00000409417 RSPO3Q9BXY4 272 aaPredicted RBP17.85■□□□□ 0.45
PDLIM2-207ENST00000409417 PAQR5Q9NXK6 330 aaPredicted RBP17.85■□□□□ 0.45
PDLIM2-207ENST00000409417 PLEKHB1Q9UF11 243 aaPredicted RBP17.85■□□□□ 0.45
PDLIM2-207ENST00000409417 KLF2Q9Y5W3 355 aaPredicted RBP17.85■□□□□ 0.45
PDLIM2-207ENST00000409417 A0A0J9YW62 118 aa17.84■□□□□ 0.45
PDLIM2-207ENST00000409417 SLC22A20A6NK97 555 aa17.84■□□□□ 0.45
PDLIM2-207ENST00000409417 AP3D1O14617 1153 aa17.84■□□□□ 0.45
PDLIM2-207ENST00000409417 GKN3PP0CG01 181 aa17.84■□□□□ 0.45
PDLIM2-207ENST00000409417 SFTPDP35247 375 aa17.84■□□□□ 0.45
PDLIM2-207ENST00000409417 APOBEC1P41238 236 aaKnown RBP17.84■□□□□ 0.45
PDLIM2-207ENST00000409417 ACAA2P42765 397 aaKnown RBP17.84■□□□□ 0.45
PDLIM2-207ENST00000409417 SLC1A3P43003 542 aa17.84■□□□□ 0.45
PDLIM2-207ENST00000409417 HTR3AP46098 478 aa17.84■□□□□ 0.45
PDLIM2-207ENST00000409417 VMACQ2NL98 169 aa17.84■□□□□ 0.45
PDLIM2-207ENST00000409417 TMEM176BQ3YBM2 270 aaPredicted RBP17.84■□□□□ 0.45
PDLIM2-207ENST00000409417 HACD2Q6Y1H2 254 aa17.84■□□□□ 0.45
PDLIM2-207ENST00000409417 ARMC8Q8IUR7 673 aa17.84■□□□□ 0.45
PDLIM2-207ENST00000409417 C9orf106Q8NAJ2 232 aa17.84■□□□□ 0.45
PDLIM2-207ENST00000409417 NAXEQ8NCW5 288 aa17.84■□□□□ 0.45
PDLIM2-207ENST00000409417 BHLHE22Q8NFJ8 381 aaPredicted RBP17.84■□□□□ 0.45
PDLIM2-207ENST00000409417 OR10D3Q8NH80 312 aa17.84■□□□□ 0.45
PDLIM2-207ENST00000409417 OR2V1Q8NHB1 315 aa17.84■□□□□ 0.45
PDLIM2-207ENST00000409417 ZNF845Q96IR2 970 aaPredicted RBP17.84■□□□□ 0.45
PDLIM2-207ENST00000409417 ZNF583Q96ND8 569 aa17.84■□□□□ 0.45
PDLIM2-207ENST00000409417 ZFP3Q96NJ6 502 aa17.84■□□□□ 0.45
PDLIM2-207ENST00000409417 HOPXQ9BPY8 73 aaPredicted RBP17.84■□□□□ 0.45
PDLIM2-207ENST00000409417 PIF1Q9H611 641 aa17.84■□□□□ 0.45
PDLIM2-207ENST00000409417 SERINC1Q9NRX5 453 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms