RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 SERTAD2Q14140 314 aa9.9□□□□□ -0.83
NIF3L1-204ENST00000409357 ZNF345Q14585 488 aa9.9□□□□□ -0.83
NIF3L1-204ENST00000409357 HENMT1Q5T8I9 393 aaKnown RBP9.9□□□□□ -0.83
NIF3L1-204ENST00000409357 PRAMEF13Q5VWM6 474 aa9.9□□□□□ -0.83
NIF3L1-204ENST00000409357 LIPJQ5W064 366 aa9.9□□□□□ -0.83
NIF3L1-204ENST00000409357 FRG2Q64ET8 278 aa9.9□□□□□ -0.83
NIF3L1-204ENST00000409357 ZNF425Q6IV72 752 aa9.9□□□□□ -0.83
NIF3L1-204ENST00000409357 PSAPL1Q6NUJ1 521 aa9.9□□□□□ -0.83
NIF3L1-204ENST00000409357 MISPQ8IVT2 679 aa9.9□□□□□ -0.83
NIF3L1-204ENST00000409357 CMTM8Q8IZV2 173 aa9.9□□□□□ -0.83
NIF3L1-204ENST00000409357 MEIOBQ8N635 442 aa9.9□□□□□ -0.83
NIF3L1-204ENST00000409357 BMPERQ8N8U9 685 aa9.9□□□□□ -0.83
NIF3L1-204ENST00000409357 KDF1Q8NAX2 398 aaPredicted RBP9.9□□□□□ -0.83
NIF3L1-204ENST00000409357 DTWD2Q8NBA8 298 aa9.9□□□□□ -0.83
NIF3L1-204ENST00000409357 C15orf40Q8WUR7 153 aa9.9□□□□□ -0.83
NIF3L1-204ENST00000409357 APOLD1Q96LR9 279 aa9.9□□□□□ -0.83
NIF3L1-204ENST00000409357 FRG2BQ96QU4 278 aa9.9□□□□□ -0.83
NIF3L1-204ENST00000409357 EGFL8Q99944 293 aa9.9□□□□□ -0.83
NIF3L1-204ENST00000409357 BRF2Q9HAW0 419 aa9.9□□□□□ -0.83
NIF3L1-204ENST00000409357 KLHL1Q9NR64 748 aa9.9□□□□□ -0.83
NIF3L1-204ENST00000409357 GPATCH2Q9NW75 528 aa9.9□□□□□ -0.83
NIF3L1-204ENST00000409357 SPATA6Q9NWH7 488 aaPredicted RBP9.9□□□□□ -0.83
NIF3L1-204ENST00000409357 TVP23BQ9NYZ1 205 aa9.9□□□□□ -0.83
NIF3L1-204ENST00000409357 STOX2Q9P2F5 926 aaPredicted RBP9.9□□□□□ -0.83
NIF3L1-204ENST00000409357 SIT1Q9Y3P8 196 aa9.9□□□□□ -0.83
NIF3L1-204ENST00000409357 SLC22A7Q9Y694 548 aa9.9□□□□□ -0.83
NIF3L1-204ENST00000409357 LAMA1P25391 3075 aa9.89□□□□□ -0.83
NIF3L1-204ENST00000409357 FANCMQ8IYD8 2048 aa9.89□□□□□ -0.83
NIF3L1-204ENST00000409357 OTOL1A6NHN0 477 aaPredicted RBP9.89□□□□□ -0.83
NIF3L1-204ENST00000409357 H3BN98 237 aa9.89□□□□□ -0.83
NIF3L1-204ENST00000409357 MID1O15344 667 aa9.89□□□□□ -0.83
NIF3L1-204ENST00000409357 YY2O15391 372 aa9.89□□□□□ -0.83
NIF3L1-204ENST00000409357 RNF13O43567 381 aa9.89□□□□□ -0.83
NIF3L1-204ENST00000409357 GREM1O60565 184 aa9.89□□□□□ -0.83
NIF3L1-204ENST00000409357 NCR1O76036 304 aa9.89□□□□□ -0.83
NIF3L1-204ENST00000409357 PAK4O96013 591 aaPredicted RBP9.89□□□□□ -0.83
NIF3L1-204ENST00000409357 IDSP22304 550 aa9.89□□□□□ -0.83
NIF3L1-204ENST00000409357 SLC6A12P48065 614 aa9.89□□□□□ -0.83
NIF3L1-204ENST00000409357 KCNJ3P48549 501 aa9.89□□□□□ -0.83
NIF3L1-204ENST00000409357 SRP9P49458 86 aaKnown RBP9.89□□□□□ -0.83
NIF3L1-204ENST00000409357 P2RY4P51582 365 aa9.89□□□□□ -0.83
NIF3L1-204ENST00000409357 CCR6P51684 374 aa9.89□□□□□ -0.83
NIF3L1-204ENST00000409357 AP1S1P61966 158 aa9.89□□□□□ -0.83
NIF3L1-204ENST00000409357 TNFRSF17Q02223 184 aa9.89□□□□□ -0.83
NIF3L1-204ENST00000409357 FZD5Q13467 585 aa9.89□□□□□ -0.83
NIF3L1-204ENST00000409357 GINS1Q14691 196 aa9.89□□□□□ -0.83
NIF3L1-204ENST00000409357 KCNAB1Q14722 419 aa9.89□□□□□ -0.83
NIF3L1-204ENST00000409357 MAPK14Q16539 360 aa9.89□□□□□ -0.83
NIF3L1-204ENST00000409357 UAP1L1Q3KQV9 507 aa9.89□□□□□ -0.83
NIF3L1-204ENST00000409357 MPPE1Q53F39 396 aa9.89□□□□□ -0.83
NIF3L1-204ENST00000409357 ADNP2Q6IQ32 1131 aa9.89□□□□□ -0.83
NIF3L1-204ENST00000409357 C1orf94Q6P1W5 598 aa9.89□□□□□ -0.83
NIF3L1-204ENST00000409357 SMARCD3Q6STE5 483 aa9.89□□□□□ -0.83
NIF3L1-204ENST00000409357 LRRN1Q6UXK5 716 aa9.89□□□□□ -0.83
NIF3L1-204ENST00000409357 PXKQ7Z7A4 578 aa9.89□□□□□ -0.83
NIF3L1-204ENST00000409357 NR2C2APQ86WQ0 139 aa9.89□□□□□ -0.83
NIF3L1-204ENST00000409357 SERPINA12Q8IW75 414 aa9.89□□□□□ -0.83
NIF3L1-204ENST00000409357 TBC1D19Q8N5T2 526 aa9.89□□□□□ -0.83
NIF3L1-204ENST00000409357 BEST4Q8NFU0 473 aa9.89□□□□□ -0.83
NIF3L1-204ENST00000409357 OR4F15Q8NGB8 312 aa9.89□□□□□ -0.83
NIF3L1-204ENST00000409357 TRMT10AQ8TBZ6 339 aaKnown RBP9.89□□□□□ -0.83
NIF3L1-204ENST00000409357 SLC7A13Q8TCU3 470 aa9.89□□□□□ -0.83
NIF3L1-204ENST00000409357 ZFPM2Q8WW38 1151 aa9.89□□□□□ -0.83
NIF3L1-204ENST00000409357 NR4A3Q92570 626 aa9.89□□□□□ -0.83
NIF3L1-204ENST00000409357 MAL2Q969L2 176 aa9.89□□□□□ -0.83
NIF3L1-204ENST00000409357 CPNE4Q96A23 557 aaPredicted RBP9.89□□□□□ -0.83
NIF3L1-204ENST00000409357 MTERF1Q99551 399 aaKnown RBP9.89□□□□□ -0.83
NIF3L1-204ENST00000409357 EDEM2Q9BV94 578 aa9.89□□□□□ -0.83
NIF3L1-204ENST00000409357 ADGRE3Q9BY15 652 aa9.89□□□□□ -0.83
NIF3L1-204ENST00000409357 SEC11CQ9BY50 192 aa9.89□□□□□ -0.83
NIF3L1-204ENST00000409357 PDFQ9HBH1 243 aa9.89□□□□□ -0.83
NIF3L1-204ENST00000409357 HRASLSQ9HDD0 168 aa9.89□□□□□ -0.83
NIF3L1-204ENST00000409357 SLAMF7Q9NQ25 335 aa9.89□□□□□ -0.83
NIF3L1-204ENST00000409357 CTPS2Q9NRF8 586 aa9.89□□□□□ -0.83
NIF3L1-204ENST00000409357 CFAP97Q9P2B7 532 aa9.89□□□□□ -0.83
NIF3L1-204ENST00000409357 PLEKHM1Q9Y4G2 1056 aa9.89□□□□□ -0.83
NIF3L1-204ENST00000409357 MYOFQ9NZM1 2061 aa9.88□□□□□ -0.83
NIF3L1-204ENST00000409357 LOC390937A0A1W2PQ73 354 aa9.88□□□□□ -0.83
NIF3L1-204ENST00000409357 BLOC1S5-TXNDC5H3BN57 136 aa9.88□□□□□ -0.83
NIF3L1-204ENST00000409357 GABARAPH6UMI1 98 aa9.88□□□□□ -0.83
NIF3L1-204ENST00000409357 PPM1DO15297 605 aa9.88□□□□□ -0.83
NIF3L1-204ENST00000409357 NDUFS6O75380 124 aaKnown RBP9.88□□□□□ -0.83
NIF3L1-204ENST00000409357 FGF19O95750 216 aa9.88□□□□□ -0.83
NIF3L1-204ENST00000409357 TRBC1P01850 177 aa9.88□□□□□ -0.83
NIF3L1-204ENST00000409357 WNT1P04628 370 aa9.88□□□□□ -0.83
NIF3L1-204ENST00000409357 HOXC4P09017 264 aaPredicted RBP9.88□□□□□ -0.83
NIF3L1-204ENST00000409357 ANKRD34CP0C6C1 535 aa9.88□□□□□ -0.83
NIF3L1-204ENST00000409357 ZDHHC11BP0C7U3 371 aa9.88□□□□□ -0.83
NIF3L1-204ENST00000409357 CELP19835 753 aa9.88□□□□□ -0.83
NIF3L1-204ENST00000409357 TNFRSF1BP20333 461 aa9.88□□□□□ -0.83
NIF3L1-204ENST00000409357 ACADLP28330 430 aa9.88□□□□□ -0.83
NIF3L1-204ENST00000409357 MAPK9P45984 424 aa9.88□□□□□ -0.83
NIF3L1-204ENST00000409357 CTSCP53634 463 aa9.88□□□□□ -0.83
NIF3L1-204ENST00000409357 CD81P60033 236 aa9.88□□□□□ -0.83
NIF3L1-204ENST00000409357 ZXDBP98169 803 aa9.88□□□□□ -0.83
NIF3L1-204ENST00000409357 SRSF4Q08170 494 aaKnown RBP9.88□□□□□ -0.83
NIF3L1-204ENST00000409357 GAB1Q13480 694 aa9.88□□□□□ -0.83
NIF3L1-204ENST00000409357 ZNF235Q14590 738 aa9.88□□□□□ -0.83
NIF3L1-204ENST00000409357 CPSF6Q16630 551 aaKnown RBP eCLIP9.88□□□□□ -0.83
NIF3L1-204ENST00000409357 MS4A13Q5J8X5 152 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms