RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 DLX5P56178 289 aa16.1■□□□□ 0.17
PDLIM2-206ENST00000409141 MERTKQ12866 999 aa16.1■□□□□ 0.17
PDLIM2-206ENST00000409141 RPS26P11Q5JNZ5 115 aaPredicted RBP16.1■□□□□ 0.17
PDLIM2-206ENST00000409141 DLEU7Q6UYE1 221 aa16.1■□□□□ 0.17
PDLIM2-206ENST00000409141 DMRTC2Q8IXT2 367 aaPredicted RBP16.1■□□□□ 0.17
PDLIM2-206ENST00000409141 CNEP1R1Q8N9A8 125 aa16.1■□□□□ 0.17
PDLIM2-206ENST00000409141 OR52P1PQ8NH57 321 aa16.1■□□□□ 0.17
PDLIM2-206ENST00000409141 RNASE6Q93091 150 aaKnown RBP16.1■□□□□ 0.17
PDLIM2-206ENST00000409141 MAL2Q969L2 176 aa16.1■□□□□ 0.17
PDLIM2-206ENST00000409141 RNF122Q9H9V4 155 aa16.1■□□□□ 0.17
PDLIM2-206ENST00000409141 CACYBPQ9HB71 228 aaKnown RBP16.1■□□□□ 0.17
PDLIM2-206ENST00000409141 A4GALTQ9NPC4 353 aa16.1■□□□□ 0.17
PDLIM2-206ENST00000409141 SERINC1Q9NRX5 453 aa16.1■□□□□ 0.17
PDLIM2-206ENST00000409141 DNAJB12Q9NXW2 375 aaKnown RBP16.1■□□□□ 0.17
PDLIM2-206ENST00000409141 MCTS1Q9ULC4 181 aaKnown RBP16.1■□□□□ 0.17
PDLIM2-206ENST00000409141 TRBV5-3A0A0A0MS03 114 aa16.1■□□□□ 0.17
PDLIM2-206ENST00000409141 C5orf58C9J3I9 102 aa16.1■□□□□ 0.17
PDLIM2-206ENST00000409141 TNFSF13O75888 250 aa16.1■□□□□ 0.17
PDLIM2-206ENST00000409141 AQP8O94778 261 aa16.1■□□□□ 0.17
PDLIM2-206ENST00000409141 BMP2P12643 396 aa16.1■□□□□ 0.17
PDLIM2-206ENST00000409141 NID1P14543 1247 aa16.1■□□□□ 0.17
PDLIM2-206ENST00000409141 SHC1P29353 583 aa16.1■□□□□ 0.17
PDLIM2-206ENST00000409141 PLAURQ03405 335 aa16.1■□□□□ 0.17
PDLIM2-206ENST00000409141 SELENBP1Q13228 472 aa16.1■□□□□ 0.17
PDLIM2-206ENST00000409141 FBXL19-AS1Q494R0 122 aa16.1■□□□□ 0.17
PDLIM2-206ENST00000409141 MRPL2Q5T653 305 aaKnown RBP16.1■□□□□ 0.17
PDLIM2-206ENST00000409141 GDF7Q7Z4P5 450 aa16.1■□□□□ 0.17
PDLIM2-206ENST00000409141 DHDDSQ86SQ9 333 aa16.1■□□□□ 0.17
PDLIM2-206ENST00000409141 VRK2Q86Y07 508 aa16.1■□□□□ 0.17
PDLIM2-206ENST00000409141 ZNF295-AS1Q8N0V1 137 aa16.1■□□□□ 0.17
PDLIM2-206ENST00000409141 TRIM8Q9BZR9 551 aa16.1■□□□□ 0.17
PDLIM2-206ENST00000409141 PIGMQ9H3S5 423 aa16.1■□□□□ 0.17
PDLIM2-206ENST00000409141 TIGARQ9NQ88 270 aa16.1■□□□□ 0.17
PDLIM2-206ENST00000409141 MRGBPQ9NV56 204 aa16.1■□□□□ 0.17
PDLIM2-206ENST00000409141 JKAMPQ9P055 326 aa16.1■□□□□ 0.17
PDLIM2-206ENST00000409141 FOXD3Q9UJU5 478 aaPredicted RBP16.1■□□□□ 0.17
PDLIM2-206ENST00000409141 ZNF232Q9UNY5 417 aa16.1■□□□□ 0.17
PDLIM2-206ENST00000409141 CORO2BQ9UQ03 480 aa16.1■□□□□ 0.17
PDLIM2-206ENST00000409141 GMEB1Q9Y692 573 aa16.1■□□□□ 0.17
PDLIM2-206ENST00000409141 DSPPQ9NZW4 1301 aa16.1■□□□□ 0.17
PDLIM2-206ENST00000409141 MED12LQ86YW9 2145 aa16.09■□□□□ 0.17
PDLIM2-206ENST00000409141 ABCA12Q86UK0 2595 aa16.09■□□□□ 0.17
PDLIM2-206ENST00000409141 IDH2P48735 452 aaKnown RBP16.09■□□□□ 0.17
PDLIM2-206ENST00000409141 SIRPAP78324 504 aa16.09■□□□□ 0.17
PDLIM2-206ENST00000409141 SNTB1Q13884 538 aaKnown RBP16.09■□□□□ 0.17
PDLIM2-206ENST00000409141 LARS2Q15031 903 aaKnown RBP16.09■□□□□ 0.17
PDLIM2-206ENST00000409141 LIN52Q52LA3 116 aa16.09■□□□□ 0.17
PDLIM2-206ENST00000409141 RUNDC3AQ59EK9 446 aa16.09■□□□□ 0.17
PDLIM2-206ENST00000409141 GCNT6Q5T4J0 391 aa16.09■□□□□ 0.17
PDLIM2-206ENST00000409141 PLEKHM3Q6ZWE6 761 aa16.09■□□□□ 0.17
PDLIM2-206ENST00000409141 LUZP2Q86TE4 346 aa16.09■□□□□ 0.17
PDLIM2-206ENST00000409141 RETREG3Q86VR2 466 aa16.09■□□□□ 0.17
PDLIM2-206ENST00000409141 DPP10Q8N608 796 aa16.09■□□□□ 0.17
PDLIM2-206ENST00000409141 SLC24A3Q9HC58 644 aa16.09■□□□□ 0.17
PDLIM2-206ENST00000409141 RLIMQ9NVW2 624 aa16.09■□□□□ 0.17
PDLIM2-206ENST00000409141 KLHL14Q9P2G3 628 aa16.09■□□□□ 0.17
PDLIM2-206ENST00000409141 PACSIN3Q9UKS6 424 aa16.09■□□□□ 0.17
PDLIM2-206ENST00000409141 ADAM11O75078 769 aa16.08■□□□□ 0.16
PDLIM2-206ENST00000409141 SMNDC1O75940 238 aaKnown RBP eCLIP16.08■□□□□ 0.16
PDLIM2-206ENST00000409141 PLGP00747 810 aaPredicted RBP16.08■□□□□ 0.16
PDLIM2-206ENST00000409141 GPX2P18283 190 aa16.08■□□□□ 0.16
PDLIM2-206ENST00000409141 SLC7A1P30825 629 aa16.08■□□□□ 0.16
PDLIM2-206ENST00000409141 APOBEC1P41238 236 aaKnown RBP16.08■□□□□ 0.16
PDLIM2-206ENST00000409141 KIR2DL2P43627 348 aaPredicted RBP16.08■□□□□ 0.16
PDLIM2-206ENST00000409141 CPA2P48052 419 aa16.08■□□□□ 0.16
PDLIM2-206ENST00000409141 NFYCQ13952 458 aa16.08■□□□□ 0.16
PDLIM2-206ENST00000409141 PRAMEF8Q5VWM4 474 aa16.08■□□□□ 0.16
PDLIM2-206ENST00000409141 PRAMEF7Q5VXH5 474 aa16.08■□□□□ 0.16
PDLIM2-206ENST00000409141 C3orf33Q6P1S2 294 aa16.08■□□□□ 0.16
PDLIM2-206ENST00000409141 ZNF836Q6ZNA1 936 aa16.08■□□□□ 0.16
PDLIM2-206ENST00000409141 NFKBIDQ8NI38 313 aa16.08■□□□□ 0.16
PDLIM2-206ENST00000409141 BBS10Q8TAM1 723 aa16.08■□□□□ 0.16
PDLIM2-206ENST00000409141 STARD4Q96DR4 205 aa16.08■□□□□ 0.16
PDLIM2-206ENST00000409141 REXO5Q96IC2 774 aaKnown RBP16.08■□□□□ 0.16
PDLIM2-206ENST00000409141 ZNF317Q96PQ6 595 aaPredicted RBP16.08■□□□□ 0.16
PDLIM2-206ENST00000409141 RBM24Q9BX46 236 aaKnown RBP16.08■□□□□ 0.16
PDLIM2-206ENST00000409141 IKZF5Q9H5V7 419 aa16.08■□□□□ 0.16
PDLIM2-206ENST00000409141 ARMC7Q9H6L4 198 aa16.08■□□□□ 0.16
PDLIM2-206ENST00000409141 BCL2L10Q9HD36 194 aa16.08■□□□□ 0.16
PDLIM2-206ENST00000409141 CTPS2Q9NRF8 586 aa16.08■□□□□ 0.16
PDLIM2-206ENST00000409141 ZNF443Q9Y2A4 671 aaPredicted RBP16.08■□□□□ 0.16
PDLIM2-206ENST00000409141 IFT52Q9Y366 437 aa16.08■□□□□ 0.16
PDLIM2-206ENST00000409141 ADGRG4Q8IZF6 3080 aa16.07■□□□□ 0.16
PDLIM2-206ENST00000409141 CDHR4A6H8M9 788 aa16.07■□□□□ 0.16
PDLIM2-206ENST00000409141 CFAP73A6NFT4 308 aa16.07■□□□□ 0.16
PDLIM2-206ENST00000409141 AP3D1O14617 1153 aa16.07■□□□□ 0.16
PDLIM2-206ENST00000409141 PGM3O95394 542 aa16.07■□□□□ 0.16
PDLIM2-206ENST00000409141 SSTR2P30874 369 aa16.07■□□□□ 0.16
PDLIM2-206ENST00000409141 PEX19P40855 299 aa16.07■□□□□ 0.16
PDLIM2-206ENST00000409141 CDK6Q00534 326 aa16.07■□□□□ 0.16
PDLIM2-206ENST00000409141 ZNF311Q5JNZ3 666 aa16.07■□□□□ 0.16
PDLIM2-206ENST00000409141 VWA1Q6PCB0 445 aa16.07■□□□□ 0.16
PDLIM2-206ENST00000409141 GRINAQ7Z429 371 aa16.07■□□□□ 0.16
PDLIM2-206ENST00000409141 BTLAQ7Z6A9 289 aa16.07■□□□□ 0.16
PDLIM2-206ENST00000409141 KIF18BQ86Y91 864 aa16.07■□□□□ 0.16
PDLIM2-206ENST00000409141 ZNF440Q8IYI8 595 aa16.07■□□□□ 0.16
PDLIM2-206ENST00000409141 C10orf111Q8N326 155 aa16.07■□□□□ 0.16
PDLIM2-206ENST00000409141 ROBO4Q8WZ75 1007 aa16.07■□□□□ 0.16
PDLIM2-206ENST00000409141 CPNE4Q96A23 557 aaPredicted RBP16.07■□□□□ 0.16
PDLIM2-206ENST00000409141 CGREF1Q99674 301 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms