RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 A0A1W2PS29 197 aa16.56■□□□□ 0.24
SMPD4-202ENST00000409031 A6NJ64 397 aa16.56■□□□□ 0.24
SMPD4-202ENST00000409031 SCAMP1O15126 338 aa16.56■□□□□ 0.24
SMPD4-202ENST00000409031 NR0B1P51843 470 aaKnown RBP16.56■□□□□ 0.24
SMPD4-202ENST00000409031 FAM209AQ5JX71 171 aa16.56■□□□□ 0.24
SMPD4-202ENST00000409031 CCDC54Q8NEL0 328 aa16.56■□□□□ 0.24
SMPD4-202ENST00000409031 CNTNAP3Q9BZ76 1288 aa16.56■□□□□ 0.24
SMPD4-202ENST00000409031 KCNK6Q9Y257 313 aa16.56■□□□□ 0.24
SMPD4-202ENST00000409031 ZNF705GA8MUZ8 300 aaPredicted RBP16.56■□□□□ 0.24
SMPD4-202ENST00000409031 C11orf98E9PRG8 122 aa16.56■□□□□ 0.24
SMPD4-202ENST00000409031 PMS2P2O95744 297 aa16.56■□□□□ 0.24
SMPD4-202ENST00000409031 EPHA2P29317 976 aa16.56■□□□□ 0.24
SMPD4-202ENST00000409031 SIRPAP78324 504 aa16.56■□□□□ 0.24
SMPD4-202ENST00000409031 KCNJ10P78508 379 aa16.56■□□□□ 0.24
SMPD4-202ENST00000409031 GALK2Q01415 458 aa16.56■□□□□ 0.24
SMPD4-202ENST00000409031 C19orf57Q0VDD7 668 aa16.56■□□□□ 0.24
SMPD4-202ENST00000409031 P2RY14Q15391 338 aa16.56■□□□□ 0.24
SMPD4-202ENST00000409031 FIGNL1Q6PIW4 674 aa16.56■□□□□ 0.24
SMPD4-202ENST00000409031 CHRDL2Q6WN34 429 aa16.56■□□□□ 0.24
SMPD4-202ENST00000409031 REM2Q8IYK8 340 aaPredicted RBP16.56■□□□□ 0.24
SMPD4-202ENST00000409031 RNF175Q8N4F7 328 aa16.56■□□□□ 0.24
SMPD4-202ENST00000409031 ZNF709Q8N972 641 aa16.56■□□□□ 0.24
SMPD4-202ENST00000409031 CHTF18Q8WVB6 975 aa16.56■□□□□ 0.24
SMPD4-202ENST00000409031 MS4A4EQ96PG1 132 aa16.56■□□□□ 0.24
SMPD4-202ENST00000409031 FAM86C1Q9NVL1 165 aa16.56■□□□□ 0.24
SMPD4-202ENST00000409031 ZNF226Q9NYT6 803 aa16.56■□□□□ 0.24
SMPD4-202ENST00000409031 LSM5Q9Y4Y9 91 aaKnown RBP16.56■□□□□ 0.24
SMPD4-202ENST00000409031 FAM227AF5H4B4 570 aa16.55■□□□□ 0.24
SMPD4-202ENST00000409031 M0R082 166 aa16.55■□□□□ 0.24
SMPD4-202ENST00000409031 SLC33A1O00400 549 aaPredicted RBP16.55■□□□□ 0.24
SMPD4-202ENST00000409031 ADAM10O14672 748 aa16.55■□□□□ 0.24
SMPD4-202ENST00000409031 GNRHRP30968 328 aa16.55■□□□□ 0.24
SMPD4-202ENST00000409031 FLT3LGP49771 235 aa16.55■□□□□ 0.24
SMPD4-202ENST00000409031 LPCAT3Q6P1A2 487 aa16.55■□□□□ 0.24
SMPD4-202ENST00000409031 SLC22A25Q6T423 547 aa16.55■□□□□ 0.24
SMPD4-202ENST00000409031 ASPGQ86U10 573 aa16.55■□□□□ 0.24
SMPD4-202ENST00000409031 COMTD1Q86VU5 262 aa16.55■□□□□ 0.24
SMPD4-202ENST00000409031 TCEAL2Q9H3H9 227 aaPredicted RBP16.55■□□□□ 0.24
SMPD4-202ENST00000409031 IKZF5Q9H5V7 419 aa16.55■□□□□ 0.24
SMPD4-202ENST00000409031 NME7Q9Y5B8 376 aa16.55■□□□□ 0.24
SMPD4-202ENST00000409031 SGK494L7N484 410 aa16.55■□□□□ 0.24
SMPD4-202ENST00000409031 M0QZQ0 153 aa16.55■□□□□ 0.24
SMPD4-202ENST00000409031 IMPA2O14732 288 aa16.55■□□□□ 0.24
SMPD4-202ENST00000409031 ETV5P41161 510 aa16.55■□□□□ 0.24
SMPD4-202ENST00000409031 CTXN1P60606 82 aa16.55■□□□□ 0.24
SMPD4-202ENST00000409031 TPBGQ13641 420 aa16.55■□□□□ 0.24
SMPD4-202ENST00000409031 RNF212Q495C1 297 aa16.55■□□□□ 0.24
SMPD4-202ENST00000409031 ENTPD8Q5MY95 495 aa16.55■□□□□ 0.24
SMPD4-202ENST00000409031 ZNF679Q8IYX0 411 aa16.55■□□□□ 0.24
SMPD4-202ENST00000409031 FNDC9Q8TBE3 224 aa16.55■□□□□ 0.24
SMPD4-202ENST00000409031 MSLNLQ96KJ4 702 aa16.55■□□□□ 0.24
SMPD4-202ENST00000409031 ADAMTS5Q9UNA0 930 aa16.55■□□□□ 0.24
SMPD4-202ENST00000409031 A0A0U1RQS6 177 aa16.55■□□□□ 0.24
SMPD4-202ENST00000409031 FAM230AA0A1W2PPH8 454 aa16.55■□□□□ 0.24
SMPD4-202ENST00000409031 SMCO3A2RU48 225 aa16.55■□□□□ 0.24
SMPD4-202ENST00000409031 FOXE1O00358 373 aaPredicted RBP16.55■□□□□ 0.24
SMPD4-202ENST00000409031 KCNJ5P48544 419 aa16.55■□□□□ 0.24
SMPD4-202ENST00000409031 AFF3P51826 1226 aaKnown RBP16.55■□□□□ 0.24
SMPD4-202ENST00000409031 CCDC71Q8IV32 467 aaPredicted RBP16.55■□□□□ 0.24
SMPD4-202ENST00000409031 SGPP2Q8IWX5 399 aa16.55■□□□□ 0.24
SMPD4-202ENST00000409031 SDR9C7Q8NEX9 313 aa16.55■□□□□ 0.24
SMPD4-202ENST00000409031 RELTQ969Z4 430 aa16.55■□□□□ 0.24
SMPD4-202ENST00000409031 SLC38A3Q99624 504 aa16.55■□□□□ 0.24
SMPD4-202ENST00000409031 SLC25A21Q9BQT8 299 aaPredicted RBP16.55■□□□□ 0.24
SMPD4-202ENST00000409031 C11orf84Q9BUA3 381 aaPredicted RBP16.55■□□□□ 0.24
SMPD4-202ENST00000409031 EVA1BQ9NVM1 165 aa16.55■□□□□ 0.24
SMPD4-202ENST00000409031 A0A1W2PQ45 241 aaPredicted RBP16.54■□□□□ 0.24
SMPD4-202ENST00000409031 A0A1W2PQY0 241 aa16.54■□□□□ 0.24
SMPD4-202ENST00000409031 SLC22A23A1A5C7 686 aa16.54■□□□□ 0.24
SMPD4-202ENST00000409031 DCDC2BA2VCK2 349 aa16.54■□□□□ 0.24
SMPD4-202ENST00000409031 TTLL8A6PVC2 850 aa16.54■□□□□ 0.24
SMPD4-202ENST00000409031 GABARAPH6UMI1 98 aa16.54■□□□□ 0.24
SMPD4-202ENST00000409031 HOXC13P31276 330 aa16.54■□□□□ 0.24
SMPD4-202ENST00000409031 ZNF425Q6IV72 752 aa16.54■□□□□ 0.24
SMPD4-202ENST00000409031 KREMEN2Q8NCW0 462 aa16.54■□□□□ 0.24
SMPD4-202ENST00000409031 TEPSINQ96N21 525 aa16.54■□□□□ 0.24
SMPD4-202ENST00000409031 PCMT1P22061 227 aa16.54■□□□□ 0.24
SMPD4-202ENST00000409031 ZNF322Q6U7Q0 402 aaPredicted RBP16.54■□□□□ 0.24
SMPD4-202ENST00000409031 SEC22AQ96IW7 307 aa16.54■□□□□ 0.24
SMPD4-202ENST00000409031 SDHAF3Q9NRP4 125 aa16.54■□□□□ 0.24
SMPD4-202ENST00000409031 FAM212BQ9NTI7 297 aaPredicted RBP16.54■□□□□ 0.24
SMPD4-202ENST00000409031 PRODH2Q9UF12 536 aa16.54■□□□□ 0.24
SMPD4-202ENST00000409031 EDDM13A0A1B0GTR0 161 aa16.54■□□□□ 0.24
SMPD4-202ENST00000409031 SNAI1O95863 264 aaPredicted RBP16.54■□□□□ 0.24
SMPD4-202ENST00000409031 LIPCP11150 499 aa16.54■□□□□ 0.24
SMPD4-202ENST00000409031 TRA2BP62995 288 aaKnown RBP16.54■□□□□ 0.24
SMPD4-202ENST00000409031 PRSS36Q5K4E3 855 aa16.54■□□□□ 0.24
SMPD4-202ENST00000409031 NRSN1Q8IZ57 195 aa16.54■□□□□ 0.24
SMPD4-202ENST00000409031 AP1S3Q96PC3 154 aa16.54■□□□□ 0.24
SMPD4-202ENST00000409031 ZNF768Q9H5H4 540 aaKnown RBP16.54■□□□□ 0.24
SMPD4-202ENST00000409031 ETV7Q9Y603 341 aa16.54■□□□□ 0.24
SMPD4-202ENST00000409031 NPIPB15A6NHN6 443 aaPredicted RBP16.54■□□□□ 0.24
SMPD4-202ENST00000409031 ZNF705FA8MVS1 300 aaPredicted RBP16.54■□□□□ 0.24
SMPD4-202ENST00000409031 GYPBP06028 91 aa16.54■□□□□ 0.24
SMPD4-202ENST00000409031 ZNF705DP0CH99 300 aaPredicted RBP16.54■□□□□ 0.24
SMPD4-202ENST00000409031 ZNF705BP0CI00 300 aaPredicted RBP16.54■□□□□ 0.24
SMPD4-202ENST00000409031 SLC11A1P49279 550 aa16.54■□□□□ 0.24
SMPD4-202ENST00000409031 CCINQ13939 588 aa16.54■□□□□ 0.24
SMPD4-202ENST00000409031 KLK6Q92876 244 aa16.54■□□□□ 0.24
SMPD4-202ENST00000409031 GAREM1Q9H706 876 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms