RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 CYP2B6P20813 491 aa3.9□□□□□ -1.79
HMGB1P13-201ENST00000406019 CCR1P32246 355 aa3.9□□□□□ -1.79
HMGB1P13-201ENST00000406019 CD80P33681 288 aa3.9□□□□□ -1.79
HMGB1P13-201ENST00000406019 HAAOP46952 286 aa3.9□□□□□ -1.79
HMGB1P13-201ENST00000406019 MYL6P60660 151 aa3.9□□□□□ -1.79
HMGB1P13-201ENST00000406019 OC90Q02509 493 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P13-201ENST00000406019 PPIDQ08752 370 aaKnown RBP3.9□□□□□ -1.79
HMGB1P13-201ENST00000406019 SRSF5Q13243 272 aaKnown RBP3.9□□□□□ -1.79
HMGB1P13-201ENST00000406019 SLC15A2Q16348 729 aa3.9□□□□□ -1.79
HMGB1P13-201ENST00000406019 TP53I3Q53FA7 332 aa3.9□□□□□ -1.79
HMGB1P13-201ENST00000406019 C2CD6Q53TS8 623 aa3.9□□□□□ -1.79
HMGB1P13-201ENST00000406019 C6orf226Q5I0X4 101 aa3.9□□□□□ -1.79
HMGB1P13-201ENST00000406019 VITQ6UXI7 678 aa3.9□□□□□ -1.79
HMGB1P13-201ENST00000406019 ZNF600Q6ZNG1 722 aa3.9□□□□□ -1.79
HMGB1P13-201ENST00000406019 DHDDSQ86SQ9 333 aa3.9□□□□□ -1.79
HMGB1P13-201ENST00000406019 MYPOPQ86VE0 399 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P13-201ENST00000406019 CATSPER3Q86XQ3 398 aa3.9□□□□□ -1.79
HMGB1P13-201ENST00000406019 TTC5Q8N0Z6 440 aa3.9□□□□□ -1.79
HMGB1P13-201ENST00000406019 Q8N9G6 341 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P13-201ENST00000406019 ZNF485Q8NCK3 441 aa3.9□□□□□ -1.79
HMGB1P13-201ENST00000406019 TMIGD2Q96BF3 282 aa3.9□□□□□ -1.79
HMGB1P13-201ENST00000406019 TMEM80Q96HE8 168 aa3.9□□□□□ -1.79
HMGB1P13-201ENST00000406019 SLC38A2Q96QD8 506 aa3.9□□□□□ -1.79
HMGB1P13-201ENST00000406019 RIOK1Q9BRS2 568 aaKnown RBP3.9□□□□□ -1.79
HMGB1P13-201ENST00000406019 HCAR1Q9BXC0 346 aa3.9□□□□□ -1.79
HMGB1P13-201ENST00000406019 TSGA10Q9BZW7 698 aa3.9□□□□□ -1.79
HMGB1P13-201ENST00000406019 NXF5Q9H1B4 397 aaKnown RBP3.9□□□□□ -1.79
HMGB1P13-201ENST00000406019 JPT2Q9H910 190 aa3.9□□□□□ -1.79
HMGB1P13-201ENST00000406019 IFT52Q9Y366 437 aa3.9□□□□□ -1.79
HMGB1P13-201ENST00000406019 CAB39Q9Y376 341 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P13-201ENST00000406019 AK6Q9Y3D8 172 aaKnown RBP3.9□□□□□ -1.79
HMGB1P13-201ENST00000406019 GON4LQ3T8J9 2241 aa3.89□□□□□ -1.79
HMGB1P13-201ENST00000406019 IGKV3D-15A0A087WSY6 115 aa3.89□□□□□ -1.79
HMGB1P13-201ENST00000406019 IGHV2-70DA0A0C4DH43 119 aa3.89□□□□□ -1.79
HMGB1P13-201ENST00000406019 A0A1W2PPE3 182 aa3.89□□□□□ -1.79
HMGB1P13-201ENST00000406019 SAGE2PA6NJ88 616 aa3.89□□□□□ -1.79
HMGB1P13-201ENST00000406019 H3BMQ9 156 aa3.89□□□□□ -1.79
HMGB1P13-201ENST00000406019 RS1O15537 224 aa3.89□□□□□ -1.79
HMGB1P13-201ENST00000406019 ARHGEF9O43307 516 aa3.89□□□□□ -1.79
HMGB1P13-201ENST00000406019 ZNF189O75820 626 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P13-201ENST00000406019 MELTFP08582 738 aa3.89□□□□□ -1.79
HMGB1P13-201ENST00000406019 POLR2MP0CAP2 368 aa3.89□□□□□ -1.79
HMGB1P13-201ENST00000406019 HSMCR30P0CW71 290 aa3.89□□□□□ -1.79
HMGB1P13-201ENST00000406019 UMPSP11172 480 aa3.89□□□□□ -1.79
HMGB1P13-201ENST00000406019 ACADSP16219 412 aa3.89□□□□□ -1.79
HMGB1P13-201ENST00000406019 IMPDH1P20839 514 aa3.89□□□□□ -1.79
HMGB1P13-201ENST00000406019 CAPGP40121 348 aa3.89□□□□□ -1.79
HMGB1P13-201ENST00000406019 ALDH3B2P48448 385 aa3.89□□□□□ -1.79
HMGB1P13-201ENST00000406019 DUSP3P51452 185 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P13-201ENST00000406019 ST3GAL3Q11203 375 aa3.89□□□□□ -1.79
HMGB1P13-201ENST00000406019 KLRB1Q12918 225 aa3.89□□□□□ -1.79
HMGB1P13-201ENST00000406019 DPYSL2Q16555 572 aa3.89□□□□□ -1.79
HMGB1P13-201ENST00000406019 LCE3CQ5T5A8 94 aa3.89□□□□□ -1.79
HMGB1P13-201ENST00000406019 ARMC12Q5T9G4 340 aa3.89□□□□□ -1.79
HMGB1P13-201ENST00000406019 PAQR6Q6TCH4 344 aa3.89□□□□□ -1.79
HMGB1P13-201ENST00000406019 REG3GQ6UW15 175 aa3.89□□□□□ -1.79
HMGB1P13-201ENST00000406019 SERPINA9Q86WD7 417 aa3.89□□□□□ -1.79
HMGB1P13-201ENST00000406019 ERICH1Q86X53 443 aa3.89□□□□□ -1.79
HMGB1P13-201ENST00000406019 ECHDC2Q86YB7 292 aa3.89□□□□□ -1.79
HMGB1P13-201ENST00000406019 KIR3DL3Q8N743 410 aa3.89□□□□□ -1.79
HMGB1P13-201ENST00000406019 CSNK1G2-AS1Q8NCQ2 148 aa3.89□□□□□ -1.79
HMGB1P13-201ENST00000406019 ZNF248Q8NDW4 579 aa3.89□□□□□ -1.79
HMGB1P13-201ENST00000406019 CATSPER1Q8NEC5 780 aa3.89□□□□□ -1.79
HMGB1P13-201ENST00000406019 OR51G2Q8NGK0 314 aa3.89□□□□□ -1.79
HMGB1P13-201ENST00000406019 LILRB4Q8NHJ6 448 aa3.89□□□□□ -1.79
HMGB1P13-201ENST00000406019 MIPOL1Q8TD10 442 aa3.89□□□□□ -1.79
HMGB1P13-201ENST00000406019 ADAMTS16Q8TE57 1224 aa3.89□□□□□ -1.79
HMGB1P13-201ENST00000406019 SLC35B4Q969S0 331 aa3.89□□□□□ -1.79
HMGB1P13-201ENST00000406019 ZNF597Q96LX8 424 aa3.89□□□□□ -1.79
HMGB1P13-201ENST00000406019 OR5B2Q96R09 309 aa3.89□□□□□ -1.79
HMGB1P13-201ENST00000406019 SYT11Q9BT88 431 aa3.89□□□□□ -1.79
HMGB1P13-201ENST00000406019 TM2D1Q9BX74 207 aa3.89□□□□□ -1.79
HMGB1P13-201ENST00000406019 SPATA16Q9BXB7 569 aa3.89□□□□□ -1.79
HMGB1P13-201ENST00000406019 RHBGQ9H310 441 aa3.89□□□□□ -1.79
HMGB1P13-201ENST00000406019 PPDPFQ9H3Y8 114 aa3.89□□□□□ -1.79
HMGB1P13-201ENST00000406019 RAB20Q9NX57 234 aa3.89□□□□□ -1.79
HMGB1P13-201ENST00000406019 RSPH14Q9UHP6 348 aa3.89□□□□□ -1.79
HMGB1P13-201ENST00000406019 CHTOPQ9Y3Y2 248 aaKnown RBP3.89□□□□□ -1.79
HMGB1P13-201ENST00000406019 MAP3K19Q56UN5 1328 aa3.89□□□□□ -1.79
HMGB1P13-201ENST00000406019 MYO3BQ8WXR4 1341 aa3.89□□□□□ -1.79
HMGB1P13-201ENST00000406019 FRMPD3Q5JV73 1810 aa3.88□□□□□ -1.79
HMGB1P13-201ENST00000406019 A0A1B0GVL5 298 aa3.88□□□□□ -1.79
HMGB1P13-201ENST00000406019 PP2D1A8MPX8 630 aa3.88□□□□□ -1.79
HMGB1P13-201ENST00000406019 FAM220BPB1ANY3 271 aa3.88□□□□□ -1.79
HMGB1P13-201ENST00000406019 F5H6K3 240 aa3.88□□□□□ -1.79
HMGB1P13-201ENST00000406019 DNALI1O14645 258 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P13-201ENST00000406019 CETN3O15182 167 aa3.88□□□□□ -1.79
HMGB1P13-201ENST00000406019 HDAC3O15379 428 aa3.88□□□□□ -1.79
HMGB1P13-201ENST00000406019 CACNG3O60359 315 aa3.88□□□□□ -1.79
HMGB1P13-201ENST00000406019 UPK3AO75631 287 aa3.88□□□□□ -1.79
HMGB1P13-201ENST00000406019 TBX6O95947 436 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P13-201ENST00000406019 CD55P08174 381 aa3.88□□□□□ -1.79
HMGB1P13-201ENST00000406019 ALOX5P09917 674 aa3.88□□□□□ -1.79
HMGB1P13-201ENST00000406019 TRIM49P0CI25 452 aa3.88□□□□□ -1.79
HMGB1P13-201ENST00000406019 TRIM49CP0CI26 452 aa3.88□□□□□ -1.79
HMGB1P13-201ENST00000406019 CT45A10P0DMU9 189 aa3.88□□□□□ -1.79
HMGB1P13-201ENST00000406019 HPGDP15428 266 aa3.88□□□□□ -1.79
HMGB1P13-201ENST00000406019 ZNF3P17036 446 aa3.88□□□□□ -1.79
HMGB1P13-201ENST00000406019 GALP22466 123 aa3.88□□□□□ -1.79
HMGB1P13-201ENST00000406019 ANXA13P27216 316 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms