RNA–Protein interactions for RNA: ENST00000405315.8

NUCB1-201, Transcript of nucleobindin 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NUCB1, Length 2,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB1-201ENST00000405315 PEX11GQ96HA9 241 aa13.54□□□□□ -0.24
NUCB1-201ENST00000405315 PGLYRP3Q96LB9 341 aa13.54□□□□□ -0.24
NUCB1-201ENST00000405315 TRAF4Q9BUZ4 470 aaPredicted RBP13.54□□□□□ -0.24
NUCB1-201ENST00000405315 CA5BQ9Y2D0 317 aa13.54□□□□□ -0.24
NUCB1-201ENST00000405315 TRAV6A0A075B6T7 132 aa13.53□□□□□ -0.24
NUCB1-201ENST00000405315 GXYLT2A0PJZ3 443 aa13.53□□□□□ -0.24
NUCB1-201ENST00000405315 RFPL3O75679 317 aa13.53□□□□□ -0.24
NUCB1-201ENST00000405315 ZNF10P21506 573 aaPredicted RBP13.53□□□□□ -0.24
NUCB1-201ENST00000405315 ACTR1BP42025 376 aa13.53□□□□□ -0.24
NUCB1-201ENST00000405315 SRP9P49458 86 aaKnown RBP13.53□□□□□ -0.24
NUCB1-201ENST00000405315 ACTR1AP61163 376 aa13.53□□□□□ -0.24
NUCB1-201ENST00000405315 PLAURQ03405 335 aa13.53□□□□□ -0.24
NUCB1-201ENST00000405315 GPM6BQ13491 265 aa13.53□□□□□ -0.24
NUCB1-201ENST00000405315 KIR2DS3Q14952 304 aa13.53□□□□□ -0.24
NUCB1-201ENST00000405315 NTRK2Q16620 822 aa13.53□□□□□ -0.24
NUCB1-201ENST00000405315 CCDC58Q4VC31 144 aa13.53□□□□□ -0.24
NUCB1-201ENST00000405315 EXOSC6Q5RKV6 272 aaKnown RBP13.53□□□□□ -0.24
NUCB1-201ENST00000405315 FCRL6Q6DN72 434 aa13.53□□□□□ -0.24
NUCB1-201ENST00000405315 FAAH2Q6GMR7 532 aa13.53□□□□□ -0.24
NUCB1-201ENST00000405315 LYPD8Q6UX82 237 aa13.53□□□□□ -0.24
NUCB1-201ENST00000405315 PXKQ7Z7A4 578 aa13.53□□□□□ -0.24
NUCB1-201ENST00000405315 SLC44A3Q8N4M1 653 aa13.53□□□□□ -0.24
NUCB1-201ENST00000405315 ZNF614Q8N883 585 aa13.53□□□□□ -0.24
NUCB1-201ENST00000405315 TMEM52Q8NDY8 209 aa13.53□□□□□ -0.24
NUCB1-201ENST00000405315 PHF21AQ96BD5 680 aa13.53□□□□□ -0.24
NUCB1-201ENST00000405315 ABHD1Q96SE0 405 aa13.53□□□□□ -0.24
NUCB1-201ENST00000405315 STACQ99469 402 aa13.53□□□□□ -0.24
NUCB1-201ENST00000405315 ERVMER34-1Q9H9K5 563 aa13.53□□□□□ -0.24
NUCB1-201ENST00000405315 CLEC4AQ9UMR7 237 aa13.53□□□□□ -0.24
NUCB1-201ENST00000405315 DOCK8Q8NF50 2099 aa13.53□□□□□ -0.24
NUCB1-201ENST00000405315 A0A1W2PRG6 482 aa13.53□□□□□ -0.24
NUCB1-201ENST00000405315 NDUFB5O43674 189 aa13.53□□□□□ -0.24
NUCB1-201ENST00000405315 FZD7O75084 574 aa13.53□□□□□ -0.24
NUCB1-201ENST00000405315 SOX30O94993 753 aa13.53□□□□□ -0.24
NUCB1-201ENST00000405315 ATP1B1P05026 303 aa13.53□□□□□ -0.24
NUCB1-201ENST00000405315 POLR2CP19387 275 aaPredicted RBP13.53□□□□□ -0.24
NUCB1-201ENST00000405315 PYCR1P32322 319 aa13.53□□□□□ -0.24
NUCB1-201ENST00000405315 GABRA3P34903 492 aa13.53□□□□□ -0.24
NUCB1-201ENST00000405315 POU6F2P78424 691 aaPredicted RBP13.53□□□□□ -0.24
NUCB1-201ENST00000405315 ACSM3Q53FZ2 586 aa13.53□□□□□ -0.24
NUCB1-201ENST00000405315 RNASE12Q5GAN4 147 aaKnown RBP13.53□□□□□ -0.24
NUCB1-201ENST00000405315 PYHIN1Q6K0P9 492 aa13.53□□□□□ -0.24
NUCB1-201ENST00000405315 FIGLAQ6QHK4 219 aa13.53□□□□□ -0.24
NUCB1-201ENST00000405315 SSX6Q7RTT6 188 aa13.53□□□□□ -0.24
NUCB1-201ENST00000405315 ZAR1Q86SH2 424 aa13.53□□□□□ -0.24
NUCB1-201ENST00000405315 RFLNBQ8N5W9 214 aa13.53□□□□□ -0.24
NUCB1-201ENST00000405315 CAMKVQ8NCB2 501 aa13.53□□□□□ -0.24
NUCB1-201ENST00000405315 IRF2BPLQ9H1B7 796 aa13.53□□□□□ -0.24
NUCB1-201ENST00000405315 MED28Q9H204 178 aa13.53□□□□□ -0.24
NUCB1-201ENST00000405315 TMEM27Q9HBJ8 222 aa13.53□□□□□ -0.24
NUCB1-201ENST00000405315 CAPN10Q9HC96 672 aa13.53□□□□□ -0.24
NUCB1-201ENST00000405315 NUDT15Q9NV35 164 aa13.53□□□□□ -0.24
NUCB1-201ENST00000405315 C14orf105Q9NVL8 296 aa13.53□□□□□ -0.24
NUCB1-201ENST00000405315 FANCMQ8IYD8 2048 aa13.53□□□□□ -0.24
NUCB1-201ENST00000405315 A0A087WV62 115 aa13.52□□□□□ -0.24
NUCB1-201ENST00000405315 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.52□□□□□ -0.24
NUCB1-201ENST00000405315 SC5DO75845 299 aa13.52□□□□□ -0.24
NUCB1-201ENST00000405315 RAB3BP20337 219 aa13.52□□□□□ -0.24
NUCB1-201ENST00000405315 GDI1P31150 447 aa13.52□□□□□ -0.24
NUCB1-201ENST00000405315 FCN2Q15485 313 aa13.52□□□□□ -0.24
NUCB1-201ENST00000405315 FAM205BPQ63HN1 556 aa13.52□□□□□ -0.24
NUCB1-201ENST00000405315 DMKNQ6E0U4 476 aaPredicted RBP13.52□□□□□ -0.24
NUCB1-201ENST00000405315 OR5T3Q8NGG3 340 aa13.52□□□□□ -0.24
NUCB1-201ENST00000405315 PHOSPHO2Q8TCD6 241 aa13.52□□□□□ -0.24
NUCB1-201ENST00000405315 TSACCQ96A04 125 aaPredicted RBP13.52□□□□□ -0.24
NUCB1-201ENST00000405315 ZNF559Q9BR84 538 aa13.52□□□□□ -0.24
NUCB1-201ENST00000405315 LYRM4Q9HD34 91 aa13.52□□□□□ -0.24
NUCB1-201ENST00000405315 H0Y8X5 98 aa13.52□□□□□ -0.25
NUCB1-201ENST00000405315 CHP2O43745 196 aa13.52□□□□□ -0.25
NUCB1-201ENST00000405315 BRINP1O60477 761 aa13.52□□□□□ -0.25
NUCB1-201ENST00000405315 CT62P0C5K7 136 aa13.52□□□□□ -0.25
NUCB1-201ENST00000405315 NRG3P56975 720 aa13.52□□□□□ -0.25
NUCB1-201ENST00000405315 ACTC1P68032 377 aa13.52□□□□□ -0.25
NUCB1-201ENST00000405315 ACTA1P68133 377 aa13.52□□□□□ -0.25
NUCB1-201ENST00000405315 CLPPQ16740 277 aaPredicted RBP13.52□□□□□ -0.25
NUCB1-201ENST00000405315 ZNF613Q6PF04 617 aa13.52□□□□□ -0.25
NUCB1-201ENST00000405315 OR5H6Q8NGV6 325 aa13.52□□□□□ -0.25
NUCB1-201ENST00000405315 CNOT9Q92600 299 aaKnown RBP13.52□□□□□ -0.25
NUCB1-201ENST00000405315 GHSRQ92847 366 aa13.52□□□□□ -0.25
NUCB1-201ENST00000405315 PTCHD1Q96NR3 888 aa13.52□□□□□ -0.25
NUCB1-201ENST00000405315 PRDM9Q9NQV7 894 aa13.52□□□□□ -0.25
NUCB1-201ENST00000405315 ACTR10Q9NZ32 417 aa13.52□□□□□ -0.25
NUCB1-201ENST00000405315 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.51□□□□□ -0.25
NUCB1-201ENST00000405315 TNFSF14O43557 240 aa13.51□□□□□ -0.25
NUCB1-201ENST00000405315 PTP4A3O75365 173 aa13.51□□□□□ -0.25
NUCB1-201ENST00000405315 DHFRP00374 187 aa13.51□□□□□ -0.25
NUCB1-201ENST00000405315 KIR2DL1P43626 348 aaPredicted RBP13.51□□□□□ -0.25
NUCB1-201ENST00000405315 KIAA1024LP59773 190 aa13.51□□□□□ -0.25
NUCB1-201ENST00000405315 PRICKLE4Q2TBC4 344 aa13.51□□□□□ -0.25
NUCB1-201ENST00000405315 TP53I3Q53FA7 332 aa13.51□□□□□ -0.25
NUCB1-201ENST00000405315 ANKRD54Q6NXT1 300 aa13.51□□□□□ -0.25
NUCB1-201ENST00000405315 CREB3L2Q70SY1 520 aa13.51□□□□□ -0.25
NUCB1-201ENST00000405315 HERVK_113Q902F9 699 aa13.51□□□□□ -0.25
NUCB1-201ENST00000405315 HSD17B8Q92506 261 aa13.51□□□□□ -0.25
NUCB1-201ENST00000405315 RERGQ96A58 199 aaPredicted RBP13.51□□□□□ -0.25
NUCB1-201ENST00000405315 HYLS1Q96M11 299 aa13.51□□□□□ -0.25
NUCB1-201ENST00000405315 TNFRSF13CQ96RJ3 184 aa13.51□□□□□ -0.25
NUCB1-201ENST00000405315 DPAGT1Q9H3H5 408 aa13.51□□□□□ -0.25
NUCB1-201ENST00000405315 FLRT3Q9NZU0 649 aa13.51□□□□□ -0.25
NUCB1-201ENST00000405315 PILRAQ9UKJ1 303 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms