RNA–Protein interactions for RNA: ENST00000404321.3

PTPRN2-204, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 5 BASIC

Gene PTPRN2, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-204ENST00000404321 PAQR5Q9NXK6 330 aaPredicted RBP16.26■□□□□ 0.19
PTPRN2-204ENST00000404321 SLC25A37Q9NYZ2 338 aa16.26■□□□□ 0.19
PTPRN2-204ENST00000404321 MYO9AB2RTY4 2548 aa16.26■□□□□ 0.19
PTPRN2-204ENST00000404321 CSMD2Q7Z408 3487 aa16.26■□□□□ 0.19
PTPRN2-204ENST00000404321 ANKHD1Q8IWZ3 2542 aaKnown RBP16.26■□□□□ 0.19
PTPRN2-204ENST00000404321 A0A096LPI6 279 aa16.26■□□□□ 0.19
PTPRN2-204ENST00000404321 GJE1A6NN92 205 aa16.26■□□□□ 0.19
PTPRN2-204ENST00000404321 CLIC1O00299 241 aa16.26■□□□□ 0.19
PTPRN2-204ENST00000404321 MSTNO14793 375 aa16.26■□□□□ 0.19
PTPRN2-204ENST00000404321 DNAJA2O60884 412 aa16.26■□□□□ 0.19
PTPRN2-204ENST00000404321 TFPTP0C1Z6 253 aa16.26■□□□□ 0.19
PTPRN2-204ENST00000404321 IL7RP16871 459 aa16.26■□□□□ 0.19
PTPRN2-204ENST00000404321 SLC7A1P30825 629 aa16.26■□□□□ 0.19
PTPRN2-204ENST00000404321 PEX19P40855 299 aa16.26■□□□□ 0.19
PTPRN2-204ENST00000404321 KCNJ5P48544 419 aa16.26■□□□□ 0.19
PTPRN2-204ENST00000404321 CTBP2P56545 445 aa16.26■□□□□ 0.19
PTPRN2-204ENST00000404321 AP1ARQ63HQ0 302 aa16.26■□□□□ 0.19
PTPRN2-204ENST00000404321 ZNF474Q6S9Z5 364 aaPredicted RBP16.26■□□□□ 0.19
PTPRN2-204ENST00000404321 PLEKHM3Q6ZWE6 761 aa16.26■□□□□ 0.19
PTPRN2-204ENST00000404321 FAM214BQ7L5A3 538 aa16.26■□□□□ 0.19
PTPRN2-204ENST00000404321 VRK2Q86Y07 508 aa16.26■□□□□ 0.19
PTPRN2-204ENST00000404321 MSRB3Q8IXL7 192 aa16.26■□□□□ 0.19
PTPRN2-204ENST00000404321 ZNF610Q8N9Z0 462 aa16.26■□□□□ 0.19
PTPRN2-204ENST00000404321 FAM222BQ8WU58 562 aa16.26■□□□□ 0.19
PTPRN2-204ENST00000404321 SLC38A5Q8WUX1 472 aa16.26■□□□□ 0.19
PTPRN2-204ENST00000404321 WDR60Q8WVS4 1066 aa16.26■□□□□ 0.19
PTPRN2-204ENST00000404321 ST8SIA1Q92185 356 aa16.26■□□□□ 0.19
PTPRN2-204ENST00000404321 NRGNQ92686 78 aa16.26■□□□□ 0.19
PTPRN2-204ENST00000404321 DNAJA3Q96EY1 480 aa16.26■□□□□ 0.19
PTPRN2-204ENST00000404321 TMEM19Q96HH6 336 aa16.26■□□□□ 0.19
PTPRN2-204ENST00000404321 GPATCH1Q9BRR8 931 aaKnown RBP16.26■□□□□ 0.19
PTPRN2-204ENST00000404321 SLC52A3Q9NQ40 469 aa16.26■□□□□ 0.19
PTPRN2-204ENST00000404321 ACER3Q9NUN7 267 aa16.26■□□□□ 0.19
PTPRN2-204ENST00000404321 DNAJB12Q9NXW2 375 aaKnown RBP16.26■□□□□ 0.19
PTPRN2-204ENST00000404321 PROCRQ9UNN8 238 aa16.26■□□□□ 0.19
PTPRN2-204ENST00000404321 IGHV3-15A0A0B4J1V0 119 aa16.25■□□□□ 0.19
PTPRN2-204ENST00000404321 CGAP01215 116 aa16.25■□□□□ 0.19
PTPRN2-204ENST00000404321 DBIP07108 87 aaKnown RBP16.25■□□□□ 0.19
PTPRN2-204ENST00000404321 CCNA2P20248 432 aa16.25■□□□□ 0.19
PTPRN2-204ENST00000404321 IDH2P48735 452 aaKnown RBP16.25■□□□□ 0.19
PTPRN2-204ENST00000404321 ATP4BP51164 291 aa16.25■□□□□ 0.19
PTPRN2-204ENST00000404321 SORDQ00796 357 aa16.25■□□□□ 0.19
PTPRN2-204ENST00000404321 GUSBP1Q15486 140 aa16.25■□□□□ 0.19
PTPRN2-204ENST00000404321 RGNQ15493 299 aa16.25■□□□□ 0.19
PTPRN2-204ENST00000404321 ZNF239Q16600 458 aaKnown RBP16.25■□□□□ 0.19
PTPRN2-204ENST00000404321 EXOC3L2Q2M3D2 409 aa16.25■□□□□ 0.19
PTPRN2-204ENST00000404321 MRPL2Q5T653 305 aaKnown RBP16.25■□□□□ 0.19
PTPRN2-204ENST00000404321 PEX5LQ8IYB4 626 aa16.25■□□□□ 0.19
PTPRN2-204ENST00000404321 ABHD3Q8WU67 409 aa16.25■□□□□ 0.19
PTPRN2-204ENST00000404321 OIT3Q8WWZ8 545 aa16.25■□□□□ 0.19
PTPRN2-204ENST00000404321 TMEM234Q8WY98 164 aa16.25■□□□□ 0.19
PTPRN2-204ENST00000404321 MAL2Q969L2 176 aa16.25■□□□□ 0.19
PTPRN2-204ENST00000404321 REXO5Q96IC2 774 aaKnown RBP16.25■□□□□ 0.19
PTPRN2-204ENST00000404321 OR5B2Q96R09 309 aa16.25■□□□□ 0.19
PTPRN2-204ENST00000404321 CTPS2Q9NRF8 586 aa16.25■□□□□ 0.19
PTPRN2-204ENST00000404321 RLIMQ9NVW2 624 aa16.25■□□□□ 0.19
PTPRN2-204ENST00000404321 ITGB1BP2Q9UKP3 347 aa16.25■□□□□ 0.19
PTPRN2-204ENST00000404321 EMC9Q9Y3B6 208 aa16.25■□□□□ 0.19
PTPRN2-204ENST00000404321 ETV2O00321 342 aaPredicted RBP16.24■□□□□ 0.19
PTPRN2-204ENST00000404321 SS18L1O75177 396 aaPredicted RBP16.24■□□□□ 0.19
PTPRN2-204ENST00000404321 CTAG2O75638 210 aa16.24■□□□□ 0.19
PTPRN2-204ENST00000404321 HOXB9P17482 250 aaPredicted RBP16.24■□□□□ 0.19
PTPRN2-204ENST00000404321 KLK2P20151 261 aa16.24■□□□□ 0.19
PTPRN2-204ENST00000404321 RPS4Y1P22090 263 aaKnown RBP16.24■□□□□ 0.19
PTPRN2-204ENST00000404321 ENPP1P22413 925 aa16.24■□□□□ 0.19
PTPRN2-204ENST00000404321 MAGEA8P43361 318 aa16.24■□□□□ 0.19
PTPRN2-204ENST00000404321 CRISP3P54108 245 aa16.24■□□□□ 0.19
PTPRN2-204ENST00000404321 GNA13Q14344 377 aa16.24■□□□□ 0.19
PTPRN2-204ENST00000404321 C3orf33Q6P1S2 294 aa16.24■□□□□ 0.19
PTPRN2-204ENST00000404321 OR52P1PQ8NH57 321 aa16.24■□□□□ 0.19
PTPRN2-204ENST00000404321 CPNE4Q96A23 557 aaPredicted RBP16.24■□□□□ 0.19
PTPRN2-204ENST00000404321 GMPPAQ96IJ6 420 aaPredicted RBP16.24■□□□□ 0.19
PTPRN2-204ENST00000404321 C12orf49Q9H741 205 aa16.24■□□□□ 0.19
PTPRN2-204ENST00000404321 TIGARQ9NQ88 270 aa16.24■□□□□ 0.19
PTPRN2-204ENST00000404321 EXOSC3Q9NQT5 275 aaKnown RBP16.24■□□□□ 0.19
PTPRN2-204ENST00000404321 SERINC1Q9NRX5 453 aa16.24■□□□□ 0.19
PTPRN2-204ENST00000404321 MED12LQ86YW9 2145 aa16.23■□□□□ 0.19
PTPRN2-204ENST00000404321 TACC2O95359 2948 aa16.23■□□□□ 0.19
PTPRN2-204ENST00000404321 TMEM247A6NEH6 219 aa16.23■□□□□ 0.19
PTPRN2-204ENST00000404321 A6NNC1 897 aa16.23■□□□□ 0.19
PTPRN2-204ENST00000404321 GKN3PP0CG01 181 aa16.23■□□□□ 0.19
PTPRN2-204ENST00000404321 TFPIP10646 304 aa16.23■□□□□ 0.19
PTPRN2-204ENST00000404321 NID1P14543 1247 aa16.23■□□□□ 0.19
PTPRN2-204ENST00000404321 CD79BP40259 229 aa16.23■□□□□ 0.19
PTPRN2-204ENST00000404321 LRIF1Q5T3J3 769 aa16.23■□□□□ 0.19
PTPRN2-204ENST00000404321 ZNF836Q6ZNA1 936 aa16.23■□□□□ 0.19
PTPRN2-204ENST00000404321 CDH24Q86UP0 819 aa16.23■□□□□ 0.19
PTPRN2-204ENST00000404321 CMIPQ8IY22 773 aa16.23■□□□□ 0.19
PTPRN2-204ENST00000404321 C10orf111Q8N326 155 aa16.23■□□□□ 0.19
PTPRN2-204ENST00000404321 RNF128Q8TEB7 428 aa16.23■□□□□ 0.19
PTPRN2-204ENST00000404321 CCDC106Q9BWC9 280 aa16.23■□□□□ 0.19
PTPRN2-204ENST00000404321 TMEM120AQ9BXJ8 343 aa16.23■□□□□ 0.19
PTPRN2-204ENST00000404321 POLDIP3Q9BY77 421 aaKnown RBP16.23■□□□□ 0.19
PTPRN2-204ENST00000404321 FGFR1OP2Q9NVK5 253 aa16.23■□□□□ 0.19
PTPRN2-204ENST00000404321 CALML5Q9NZT1 146 aa16.23■□□□□ 0.19
PTPRN2-204ENST00000404321 VAPAQ9P0L0 249 aa16.23■□□□□ 0.19
PTPRN2-204ENST00000404321 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.23■□□□□ 0.19
PTPRN2-204ENST00000404321 DSPPQ9NZW4 1301 aa16.22■□□□□ 0.19
PTPRN2-204ENST00000404321 SH3D21A4FU49 640 aa16.22■□□□□ 0.19
PTPRN2-204ENST00000404321 CD8BP10966 210 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms