RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 RHOBTB1O94844 696 aa2.86□□□□□ -1.95
HMGB1P17-201ENST00000403495 DIRAS1O95057 198 aa2.86□□□□□ -1.95
HMGB1P17-201ENST00000403495 OPN1MWP04001 364 aa2.86□□□□□ -1.95
HMGB1P17-201ENST00000403495 NPIPA8P0DM63 369 aa2.86□□□□□ -1.95
HMGB1P17-201ENST00000403495 OPN1MW2P0DN77 364 aa2.86□□□□□ -1.95
HMGB1P17-201ENST00000403495 OPN1MW3P0DN78 364 aa2.86□□□□□ -1.95
HMGB1P17-201ENST00000403495 IGLL1P15814 213 aa2.86□□□□□ -1.95
HMGB1P17-201ENST00000403495 HOXD10P28358 340 aa2.86□□□□□ -1.95
HMGB1P17-201ENST00000403495 GCAP28676 217 aa2.86□□□□□ -1.95
HMGB1P17-201ENST00000403495 UGT1A3P35503 534 aa2.86□□□□□ -1.95
HMGB1P17-201ENST00000403495 MEOX2P50222 304 aa2.86□□□□□ -1.95
HMGB1P17-201ENST00000403495 BIDP55957 195 aa2.86□□□□□ -1.95
HMGB1P17-201ENST00000403495 KRTAP10-12P60413 245 aa2.86□□□□□ -1.95
HMGB1P17-201ENST00000403495 RPS14P62263 151 aaKnown RBP2.86□□□□□ -1.95
HMGB1P17-201ENST00000403495 TNFRSF17Q02223 184 aa2.86□□□□□ -1.95
HMGB1P17-201ENST00000403495 FGL1Q08830 312 aa2.86□□□□□ -1.95
HMGB1P17-201ENST00000403495 DMRTC1Q5HYR2 192 aa2.86□□□□□ -1.95
HMGB1P17-201ENST00000403495 PDZK1Q5T2W1 519 aa2.86□□□□□ -1.95
HMGB1P17-201ENST00000403495 SPINK14Q6IE38 97 aa2.86□□□□□ -1.95
HMGB1P17-201ENST00000403495 OR5M10Q6IEU7 315 aa2.86□□□□□ -1.95
HMGB1P17-201ENST00000403495 MARCH9Q86YJ5 346 aa2.86□□□□□ -1.95
HMGB1P17-201ENST00000403495 SLC35F2Q8IXU6 374 aa2.86□□□□□ -1.95
HMGB1P17-201ENST00000403495 CEND1Q8N111 149 aa2.86□□□□□ -1.95
HMGB1P17-201ENST00000403495 OR2L13Q8N349 312 aa2.86□□□□□ -1.95
HMGB1P17-201ENST00000403495 GPR137CQ8N3F9 429 aa2.86□□□□□ -1.95
HMGB1P17-201ENST00000403495 CADM2Q8N3J6 435 aa2.86□□□□□ -1.95
HMGB1P17-201ENST00000403495 DHRSXQ8N5I4 330 aa2.86□□□□□ -1.95
HMGB1P17-201ENST00000403495 ZNF525Q8N782 197 aa2.86□□□□□ -1.95
HMGB1P17-201ENST00000403495 OR10H4Q8NGA5 316 aa2.86□□□□□ -1.95
HMGB1P17-201ENST00000403495 OR10A7Q8NGE5 316 aa2.86□□□□□ -1.95
HMGB1P17-201ENST00000403495 OR56B4Q8NH76 319 aa2.86□□□□□ -1.95
HMGB1P17-201ENST00000403495 FAM110BQ8TC76 370 aa2.86□□□□□ -1.95
HMGB1P17-201ENST00000403495 SHC3Q92529 594 aa2.86□□□□□ -1.95
HMGB1P17-201ENST00000403495 TIMD4Q96H15 378 aa2.86□□□□□ -1.95
HMGB1P17-201ENST00000403495 SERAC1Q96JX3 654 aa2.86□□□□□ -1.95
HMGB1P17-201ENST00000403495 C7orf34Q96L11 122 aa2.86□□□□□ -1.95
HMGB1P17-201ENST00000403495 CAPS2Q9BXY5 557 aa2.86□□□□□ -1.95
HMGB1P17-201ENST00000403495 VCPKMTQ9H867 229 aa2.86□□□□□ -1.95
HMGB1P17-201ENST00000403495 POPDC2Q9HBU9 364 aa2.86□□□□□ -1.95
HMGB1P17-201ENST00000403495 B3GNT2Q9NY97 397 aa2.86□□□□□ -1.95
HMGB1P17-201ENST00000403495 HOXC10Q9NYD6 342 aa2.86□□□□□ -1.95
HMGB1P17-201ENST00000403495 AIPL1Q9NZN9 384 aa2.86□□□□□ -1.95
HMGB1P17-201ENST00000403495 KLHL21Q9UJP4 597 aa2.86□□□□□ -1.95
HMGB1P17-201ENST00000403495 NPIPA1Q9UND3 350 aa2.86□□□□□ -1.95
HMGB1P17-201ENST00000403495 POLDIP2Q9Y2S7 368 aa2.86□□□□□ -1.95
HMGB1P17-201ENST00000403495 RRP15Q9Y3B9 282 aaKnown RBP2.86□□□□□ -1.95
HMGB1P17-201ENST00000403495 ASB3Q9Y575 518 aa2.86□□□□□ -1.95
HMGB1P17-201ENST00000403495 K7N7A8 449 aa2.85□□□□□ -1.95
HMGB1P17-201ENST00000403495 WWP2O00308 870 aa2.85□□□□□ -1.95
HMGB1P17-201ENST00000403495 FOXE1O00358 373 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P17-201ENST00000403495 TPM2P07951 284 aa2.85□□□□□ -1.95
HMGB1P17-201ENST00000403495 ZBTB25P24278 435 aa2.85□□□□□ -1.95
HMGB1P17-201ENST00000403495 AQP1P29972 269 aa2.85□□□□□ -1.95
HMGB1P17-201ENST00000403495 PRKAR2BP31323 418 aa2.85□□□□□ -1.95
HMGB1P17-201ENST00000403495 FGF9P31371 208 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P17-201ENST00000403495 MAGEA8P43361 318 aa2.85□□□□□ -1.95
HMGB1P17-201ENST00000403495 RIPK1Q13546 671 aa2.85□□□□□ -1.95
HMGB1P17-201ENST00000403495 AANATQ16613 207 aa2.85□□□□□ -1.95
HMGB1P17-201ENST00000403495 RNF212Q495C1 297 aa2.85□□□□□ -1.95
HMGB1P17-201ENST00000403495 LRRC23Q53EV4 343 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P17-201ENST00000403495 CEP55Q53EZ4 464 aa2.85□□□□□ -1.95
HMGB1P17-201ENST00000403495 OR2B11Q5JQS5 317 aa2.85□□□□□ -1.95
HMGB1P17-201ENST00000403495 PAGE2BQ5JRK9 111 aa2.85□□□□□ -1.95
HMGB1P17-201ENST00000403495 ZNF658Q5TYW1 1059 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P17-201ENST00000403495 OR4F3Q6IEY1 312 aa2.85□□□□□ -1.95
HMGB1P17-201ENST00000403495 ZNF544Q6NX49 715 aa2.85□□□□□ -1.95
HMGB1P17-201ENST00000403495 MOB1BQ7L9L4 216 aa2.85□□□□□ -1.95
HMGB1P17-201ENST00000403495 APOBEC3FQ8IUX4 373 aaKnown RBP2.85□□□□□ -1.95
HMGB1P17-201ENST00000403495 ZBED8Q8IZ13 594 aa2.85□□□□□ -1.95
HMGB1P17-201ENST00000403495 GPD1LQ8N335 351 aa2.85□□□□□ -1.95
HMGB1P17-201ENST00000403495 FBXL16Q8N461 479 aa2.85□□□□□ -1.95
HMGB1P17-201ENST00000403495 C11orf42Q8N5U0 333 aa2.85□□□□□ -1.95
HMGB1P17-201ENST00000403495 ZPLD1Q8TCW7 415 aa2.85□□□□□ -1.95
HMGB1P17-201ENST00000403495 SLC38A2Q96QD8 506 aa2.85□□□□□ -1.95
HMGB1P17-201ENST00000403495 KIR2DL4Q99706 377 aa2.85□□□□□ -1.95
HMGB1P17-201ENST00000403495 CCT7Q99832 543 aa2.85□□□□□ -1.95
HMGB1P17-201ENST00000403495 KLHDC3Q9BQ90 382 aa2.85□□□□□ -1.95
HMGB1P17-201ENST00000403495 NT5C3AQ9H0P0 336 aa2.85□□□□□ -1.95
HMGB1P17-201ENST00000403495 Q9H3A6 140 aa2.85□□□□□ -1.95
HMGB1P17-201ENST00000403495 NANSQ9NR45 359 aa2.85□□□□□ -1.95
HMGB1P17-201ENST00000403495 PLSCR3Q9NRY6 295 aa2.85□□□□□ -1.95
HMGB1P17-201ENST00000403495 APOBEC3BQ9UH17 382 aaKnown RBP2.85□□□□□ -1.95
HMGB1P17-201ENST00000403495 CDH9Q9ULB4 789 aa2.85□□□□□ -1.95
HMGB1P17-201ENST00000403495 ERVW-1Q9UQF0 538 aa2.85□□□□□ -1.95
HMGB1P17-201ENST00000403495 PLLPQ9Y342 182 aa2.85□□□□□ -1.95
HMGB1P17-201ENST00000403495 SLCO1B1Q9Y6L6 691 aa2.85□□□□□ -1.95
HMGB1P17-201ENST00000403495 TRAV26-1A0A087WT03 109 aa2.84□□□□□ -1.95
HMGB1P17-201ENST00000403495 A0A1B0GVL5 298 aa2.84□□□□□ -1.95
HMGB1P17-201ENST00000403495 A0A1B0GWB2 263 aa2.84□□□□□ -1.95
HMGB1P17-201ENST00000403495 A0A1W2PNV4 684 aa2.84□□□□□ -1.95
HMGB1P17-201ENST00000403495 BTBD17A6NE02 478 aa2.84□□□□□ -1.95
HMGB1P17-201ENST00000403495 OR10H3O60404 316 aa2.84□□□□□ -1.95
HMGB1P17-201ENST00000403495 HCN1O60741 890 aa2.84□□□□□ -1.95
HMGB1P17-201ENST00000403495 CABYRO75952 493 aa2.84□□□□□ -1.95
HMGB1P17-201ENST00000403495 ATP5LO75964 103 aa2.84□□□□□ -1.95
HMGB1P17-201ENST00000403495 STSP08842 583 aa2.84□□□□□ -1.95
HMGB1P17-201ENST00000403495 RBMXP38159 391 aaKnown RBP2.84□□□□□ -1.95
HMGB1P17-201ENST00000403495 GRIA1P42261 906 aa2.84□□□□□ -1.95
HMGB1P17-201ENST00000403495 ATP1B3P54709 279 aa2.84□□□□□ -1.95
HMGB1P17-201ENST00000403495 DIO3P55073 304 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms