RNA–Protein interactions for RNA: ENST00000401499.1

AC008060.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC008060.1, Length 1,551 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008060.1-201ENST00000401499 ZNF563Q8TA94 476 aa17.7■□□□□ 0.42
AC008060.1-201ENST00000401499 TMEM239Q8WW34 195 aa17.7■□□□□ 0.42
AC008060.1-201ENST00000401499 CYGBQ8WWM9 190 aa17.7■□□□□ 0.42
AC008060.1-201ENST00000401499 FRMD6Q96NE9 622 aa17.7■□□□□ 0.42
AC008060.1-201ENST00000401499 CPNE5Q9HCH3 593 aa17.7■□□□□ 0.42
AC008060.1-201ENST00000401499 STMN3Q9NZ72 180 aa17.7■□□□□ 0.42
AC008060.1-201ENST00000401499 MED11Q9P086 117 aa17.7■□□□□ 0.42
AC008060.1-201ENST00000401499 PPP4R1LQ9P1A2 415 aa17.7■□□□□ 0.42
AC008060.1-201ENST00000401499 ORC6Q9Y5N6 252 aa17.7■□□□□ 0.42
AC008060.1-201ENST00000401499 MPDZO75970 2070 aa17.69■□□□□ 0.42
AC008060.1-201ENST00000401499 ANKUB1A6NFN9 424 aa17.69■□□□□ 0.42
AC008060.1-201ENST00000401499 ZNF891A8MT65 544 aaPredicted RBP17.69■□□□□ 0.42
AC008060.1-201ENST00000401499 DENRO43583 198 aaKnown RBP17.69■□□□□ 0.42
AC008060.1-201ENST00000401499 NUDT14O95848 222 aa17.69■□□□□ 0.42
AC008060.1-201ENST00000401499 GNAO1P09471 354 aa17.69■□□□□ 0.42
AC008060.1-201ENST00000401499 PGCP20142 388 aa17.69■□□□□ 0.42
AC008060.1-201ENST00000401499 EPHA2P29317 976 aa17.69■□□□□ 0.42
AC008060.1-201ENST00000401499 CAPGP40121 348 aa17.69■□□□□ 0.42
AC008060.1-201ENST00000401499 RRADP55042 308 aa17.69■□□□□ 0.42
AC008060.1-201ENST00000401499 SOX8P57073 446 aa17.69■□□□□ 0.42
AC008060.1-201ENST00000401499 RPP38P78345 283 aaKnown RBP17.69■□□□□ 0.42
AC008060.1-201ENST00000401499 RAPSNQ13702 412 aa17.69■□□□□ 0.42
AC008060.1-201ENST00000401499 WLSQ5T9L3 541 aa17.69■□□□□ 0.42
AC008060.1-201ENST00000401499 SLC22A10Q63ZE4 541 aa17.69■□□□□ 0.42
AC008060.1-201ENST00000401499 SLC30A6Q6NXT4 461 aa17.69■□□□□ 0.42
AC008060.1-201ENST00000401499 ATG4DQ86TL0 474 aaPredicted RBP17.69■□□□□ 0.42
AC008060.1-201ENST00000401499 DNAJA4Q8WW22 397 aaPredicted RBP17.69■□□□□ 0.42
AC008060.1-201ENST00000401499 FAM46AQ96IP4 442 aaKnown RBP17.69■□□□□ 0.42
AC008060.1-201ENST00000401499 MPP4Q96JB8 637 aa17.69■□□□□ 0.42
AC008060.1-201ENST00000401499 SGCZQ96LD1 299 aa17.69■□□□□ 0.42
AC008060.1-201ENST00000401499 GABARAPL3Q9BY60 117 aa17.69■□□□□ 0.42
AC008060.1-201ENST00000401499 ANGPTL4Q9BY76 406 aa17.69■□□□□ 0.42
AC008060.1-201ENST00000401499 RIBC2Q9H4K1 309 aa17.69■□□□□ 0.42
AC008060.1-201ENST00000401499 FAM118AQ9NWS6 357 aa17.69■□□□□ 0.42
AC008060.1-201ENST00000401499 TEKT2Q9UIF3 430 aa17.69■□□□□ 0.42
AC008060.1-201ENST00000401499 LRCH1Q9Y2L9 728 aa17.69■□□□□ 0.42
AC008060.1-201ENST00000401499 A0A087WUJ7 227 aa17.68■□□□□ 0.42
AC008060.1-201ENST00000401499 E9PQ18 207 aa17.68■□□□□ 0.42
AC008060.1-201ENST00000401499 GNB5O14775 395 aa17.68■□□□□ 0.42
AC008060.1-201ENST00000401499 CLIC3O95833 236 aa17.68■□□□□ 0.42
AC008060.1-201ENST00000401499 F10P00742 488 aa17.68■□□□□ 0.42
AC008060.1-201ENST00000401499 SLC1A3P43003 542 aa17.68■□□□□ 0.42
AC008060.1-201ENST00000401499 QPRTQ15274 297 aa17.68■□□□□ 0.42
AC008060.1-201ENST00000401499 ABHD17BQ5VST6 288 aa17.68■□□□□ 0.42
AC008060.1-201ENST00000401499 GPALPP1Q8IXQ4 340 aa17.68■□□□□ 0.42
AC008060.1-201ENST00000401499 PARP8Q8N3A8 854 aa17.68■□□□□ 0.42
AC008060.1-201ENST00000401499 WDSUB1Q8N9V3 476 aa17.68■□□□□ 0.42
AC008060.1-201ENST00000401499 ZNF248Q8NDW4 579 aa17.68■□□□□ 0.42
AC008060.1-201ENST00000401499 PIGXQ8TBF5 258 aa17.68■□□□□ 0.42
AC008060.1-201ENST00000401499 ANKRD60Q9BZ19 345 aa17.68■□□□□ 0.42
AC008060.1-201ENST00000401499 ADAM19Q9H013 955 aa17.68■□□□□ 0.42
AC008060.1-201ENST00000401499 ING2Q9H160 280 aa17.68■□□□□ 0.42
AC008060.1-201ENST00000401499 ZNF556Q9HAH1 456 aa17.68■□□□□ 0.42
AC008060.1-201ENST00000401499 MEPEQ9NQ76 525 aaPredicted RBP17.68■□□□□ 0.42
AC008060.1-201ENST00000401499 SDHAF3Q9NRP4 125 aa17.68■□□□□ 0.42
AC008060.1-201ENST00000401499 C20orf141Q9NUB4 165 aa17.68■□□□□ 0.42
AC008060.1-201ENST00000401499 CNIH4Q9P003 139 aa17.68■□□□□ 0.42
AC008060.1-201ENST00000401499 REV1Q9UBZ9 1251 aa17.68■□□□□ 0.42
AC008060.1-201ENST00000401499 POLHQ9Y253 713 aa17.68■□□□□ 0.42
AC008060.1-201ENST00000401499 FRYQ5TBA9 3013 aa17.68■□□□□ 0.42
AC008060.1-201ENST00000401499 G3V3Y1 287 aa17.67■□□□□ 0.42
AC008060.1-201ENST00000401499 H0YAE9 185 aa17.67■□□□□ 0.42
AC008060.1-201ENST00000401499 KPNA4O00629 521 aaPredicted RBP17.67■□□□□ 0.42
AC008060.1-201ENST00000401499 KLK10O43240 276 aa17.67■□□□□ 0.42
AC008060.1-201ENST00000401499 KLF4O43474 513 aa17.67■□□□□ 0.42
AC008060.1-201ENST00000401499 CDC40O60508 579 aaKnown RBP eCLIP17.67■□□□□ 0.42
AC008060.1-201ENST00000401499 TP53P04637 393 aaPredicted RBP17.67■□□□□ 0.42
AC008060.1-201ENST00000401499 RBM34P42696 430 aaKnown RBP17.67■□□□□ 0.42
AC008060.1-201ENST00000401499 CYB561P49447 251 aa17.67■□□□□ 0.42
AC008060.1-201ENST00000401499 SUMO3P55854 103 aaPredicted RBP17.67■□□□□ 0.42
AC008060.1-201ENST00000401499 USP51Q70EK9 711 aa17.67■□□□□ 0.42
AC008060.1-201ENST00000401499 RRM2BQ7LG56 351 aa17.67■□□□□ 0.42
AC008060.1-201ENST00000401499 P3H2Q8IVL5 708 aa17.67■□□□□ 0.42
AC008060.1-201ENST00000401499 RNF113BQ8IZP6 322 aaKnown RBP17.67■□□□□ 0.42
AC008060.1-201ENST00000401499 OR2M3Q8NG83 312 aa17.67■□□□□ 0.42
AC008060.1-201ENST00000401499 SNIP1Q8TAD8 396 aaKnown RBP17.67■□□□□ 0.42
AC008060.1-201ENST00000401499 NPAS1Q99742 590 aa17.67■□□□□ 0.42
AC008060.1-201ENST00000401499 UCK2Q9BZX2 261 aa17.67■□□□□ 0.42
AC008060.1-201ENST00000401499 GRIP2Q9C0E4 1043 aa17.67■□□□□ 0.42
AC008060.1-201ENST00000401499 TAS2R10Q9NYW0 307 aa17.67■□□□□ 0.42
AC008060.1-201ENST00000401499 PCDHGB5Q9Y5G0 923 aa17.67■□□□□ 0.42
AC008060.1-201ENST00000401499 IGKV1D-42A0A075B6H8 117 aa17.66■□□□□ 0.42
AC008060.1-201ENST00000401499 A0A0G2JMM0 328 aa17.66■□□□□ 0.42
AC008060.1-201ENST00000401499 A0A1W2PPB8 328 aa17.66■□□□□ 0.42
AC008060.1-201ENST00000401499 A0A1W2PRS3 328 aa17.66■□□□□ 0.42
AC008060.1-201ENST00000401499 ANKRD33BA6NCL7 494 aa17.66■□□□□ 0.42
AC008060.1-201ENST00000401499 A6NL46 340 aa17.66■□□□□ 0.42
AC008060.1-201ENST00000401499 KIR3DP1A8MWS1 328 aa17.66■□□□□ 0.42
AC008060.1-201ENST00000401499 TACR3P29371 465 aa17.66■□□□□ 0.42
AC008060.1-201ENST00000401499 CD96P40200 585 aa17.66■□□□□ 0.42
AC008060.1-201ENST00000401499 GPR4P46093 362 aa17.66■□□□□ 0.42
AC008060.1-201ENST00000401499 GSSP48637 474 aa17.66■□□□□ 0.42
AC008060.1-201ENST00000401499 NPRL3Q12980 569 aa17.66■□□□□ 0.42
AC008060.1-201ENST00000401499 TUBA3CQ13748 450 aa17.66■□□□□ 0.42
AC008060.1-201ENST00000401499 TUBA3EQ6PEY2 450 aa17.66■□□□□ 0.42
AC008060.1-201ENST00000401499 ARSKQ6UWY0 536 aa17.66■□□□□ 0.42
AC008060.1-201ENST00000401499 CD300LDQ6UXZ3 194 aa17.66■□□□□ 0.42
AC008060.1-201ENST00000401499 LINC00696Q6ZRV3 163 aa17.66■□□□□ 0.42
AC008060.1-201ENST00000401499 FADS6Q8N9I5 356 aa17.66■□□□□ 0.42
AC008060.1-201ENST00000401499 GNPDA2Q8TDQ7 276 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms