RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 KCNJ10P78508 379 aa14.15□□□□□ -0.14
ATG4B-203ENST00000400772 LRRC74AQ0VAA2 488 aa14.15□□□□□ -0.14
ATG4B-203ENST00000400772 SELENBP1Q13228 472 aa14.15□□□□□ -0.14
ATG4B-203ENST00000400772 GSTA3Q16772 222 aa14.15□□□□□ -0.14
ATG4B-203ENST00000400772 GPAT3Q53EU6 434 aa14.15□□□□□ -0.14
ATG4B-203ENST00000400772 FBXW10Q5XX13 1052 aa14.15□□□□□ -0.14
ATG4B-203ENST00000400772 PAMR1Q6UXH9 720 aa14.15□□□□□ -0.14
ATG4B-203ENST00000400772 ZNF550Q7Z398 422 aa14.15□□□□□ -0.14
ATG4B-203ENST00000400772 TRIML2Q8N7C3 387 aa14.15□□□□□ -0.14
ATG4B-203ENST00000400772 OR9I1Q8NGQ6 314 aa14.15□□□□□ -0.14
ATG4B-203ENST00000400772 PNPT1Q8TCS8 783 aaKnown RBP14.15□□□□□ -0.14
ATG4B-203ENST00000400772 ABHD3Q8WU67 409 aa14.15□□□□□ -0.14
ATG4B-203ENST00000400772 ATP6V1G3Q96LB4 118 aa14.15□□□□□ -0.14
ATG4B-203ENST00000400772 TRNT1Q96Q11 434 aaKnown RBP14.15□□□□□ -0.14
ATG4B-203ENST00000400772 SLC38A1Q9H2H9 487 aa14.15□□□□□ -0.14
ATG4B-203ENST00000400772 ACER3Q9NUN7 267 aa14.15□□□□□ -0.14
ATG4B-203ENST00000400772 C6orf203Q9P0P8 240 aaPredicted RBP14.15□□□□□ -0.14
ATG4B-203ENST00000400772 SLC35A3Q9Y2D2 325 aa14.15□□□□□ -0.14
ATG4B-203ENST00000400772 CELSR1Q9NYQ6 3014 aa14.15□□□□□ -0.14
ATG4B-203ENST00000400772 HRNRQ86YZ3 2850 aaPredicted RBP14.14□□□□□ -0.15
ATG4B-203ENST00000400772 RFXANKO14593 260 aa14.14□□□□□ -0.15
ATG4B-203ENST00000400772 CASKO14936 926 aa14.14□□□□□ -0.15
ATG4B-203ENST00000400772 DIAPH2O60879 1101 aa14.14□□□□□ -0.15
ATG4B-203ENST00000400772 ATE1O95260 518 aa14.14□□□□□ -0.15
ATG4B-203ENST00000400772 CD1EP15812 388 aa14.14□□□□□ -0.15
ATG4B-203ENST00000400772 CTBP2P56545 445 aa14.14□□□□□ -0.15
ATG4B-203ENST00000400772 EXOC3L2Q2M3D2 409 aa14.14□□□□□ -0.15
ATG4B-203ENST00000400772 ANKRD34AQ69YU3 496 aa14.14□□□□□ -0.15
ATG4B-203ENST00000400772 GTF2IRD2BQ6EKJ0 949 aa14.14□□□□□ -0.15
ATG4B-203ENST00000400772 PLEKHM3Q6ZWE6 761 aa14.14□□□□□ -0.15
ATG4B-203ENST00000400772 GTF2IRD2Q86UP8 949 aa14.14□□□□□ -0.15
ATG4B-203ENST00000400772 TUSC5Q8IXB3 177 aa14.14□□□□□ -0.15
ATG4B-203ENST00000400772 ST8SIA1Q92185 356 aa14.14□□□□□ -0.15
ATG4B-203ENST00000400772 C7orf26Q96N11 449 aa14.14□□□□□ -0.15
ATG4B-203ENST00000400772 KLHL4Q9C0H6 718 aa14.14□□□□□ -0.15
ATG4B-203ENST00000400772 SLCO1B3Q9NPD5 702 aa14.14□□□□□ -0.15
ATG4B-203ENST00000400772 TIGARQ9NQ88 270 aa14.14□□□□□ -0.15
ATG4B-203ENST00000400772 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.14□□□□□ -0.15
ATG4B-203ENST00000400772 ING1Q9UK53 422 aaPredicted RBP14.14□□□□□ -0.15
ATG4B-203ENST00000400772 LIPT1Q9Y234 373 aa14.14□□□□□ -0.15
ATG4B-203ENST00000400772 TEP1Q99973 2627 aaKnown RBP14.13□□□□□ -0.15
ATG4B-203ENST00000400772 HIVEP1P15822 2718 aa14.13□□□□□ -0.15
ATG4B-203ENST00000400772 IGHV3-15A0A0B4J1V0 119 aa14.13□□□□□ -0.15
ATG4B-203ENST00000400772 AGAP5A6NIR3 686 aa14.13□□□□□ -0.15
ATG4B-203ENST00000400772 THBDP07204 575 aa14.13□□□□□ -0.15
ATG4B-203ENST00000400772 PGCP20142 388 aa14.13□□□□□ -0.15
ATG4B-203ENST00000400772 KLK2P20151 261 aa14.13□□□□□ -0.15
ATG4B-203ENST00000400772 RPS4Y1P22090 263 aaKnown RBP14.13□□□□□ -0.15
ATG4B-203ENST00000400772 CRYGSP22914 178 aa14.13□□□□□ -0.15
ATG4B-203ENST00000400772 DNASE1P24855 282 aa14.13□□□□□ -0.15
ATG4B-203ENST00000400772 LOXP28300 417 aaPredicted RBP14.13□□□□□ -0.15
ATG4B-203ENST00000400772 POLR2JP52435 117 aaKnown RBP14.13□□□□□ -0.15
ATG4B-203ENST00000400772 RAC3P60763 192 aa14.13□□□□□ -0.15
ATG4B-203ENST00000400772 TXNL4AP83876 142 aaKnown RBP14.13□□□□□ -0.15
ATG4B-203ENST00000400772 RNPS1Q15287 305 aaKnown RBP14.13□□□□□ -0.15
ATG4B-203ENST00000400772 GTDC1Q4AE62 458 aa14.13□□□□□ -0.15
ATG4B-203ENST00000400772 STAC2Q6ZMT1 411 aa14.13□□□□□ -0.15
ATG4B-203ENST00000400772 LRRC74BQ6ZQY2 392 aa14.13□□□□□ -0.15
ATG4B-203ENST00000400772 FCRLAQ7L513 359 aa14.13□□□□□ -0.15
ATG4B-203ENST00000400772 NUFIP2Q7Z417 695 aaKnown RBP14.13□□□□□ -0.15
ATG4B-203ENST00000400772 LSRQ86X29 649 aaPredicted RBP14.13□□□□□ -0.15
ATG4B-203ENST00000400772 CNOT9Q92600 299 aaKnown RBP14.13□□□□□ -0.15
ATG4B-203ENST00000400772 VPS33AQ96AX1 596 aa14.13□□□□□ -0.15
ATG4B-203ENST00000400772 MED18Q9BUE0 208 aa14.13□□□□□ -0.15
ATG4B-203ENST00000400772 CCDC106Q9BWC9 280 aa14.13□□□□□ -0.15
ATG4B-203ENST00000400772 C12orf49Q9H741 205 aa14.13□□□□□ -0.15
ATG4B-203ENST00000400772 EXOSC3Q9NQT5 275 aaKnown RBP14.13□□□□□ -0.15
ATG4B-203ENST00000400772 MED13LQ71F56 2210 aa14.13□□□□□ -0.15
ATG4B-203ENST00000400772 PRKD3O94806 890 aa14.12□□□□□ -0.15
ATG4B-203ENST00000400772 KRT75O95678 551 aa14.12□□□□□ -0.15
ATG4B-203ENST00000400772 PABPC4LP0CB38 370 aaKnown RBP14.12□□□□□ -0.15
ATG4B-203ENST00000400772 ZCCHC18P0CG32 403 aa14.12□□□□□ -0.15
ATG4B-203ENST00000400772 RYKP34925 604 aa14.12□□□□□ -0.15
ATG4B-203ENST00000400772 HPCAP84074 193 aa14.12□□□□□ -0.15
ATG4B-203ENST00000400772 MERTKQ12866 999 aa14.12□□□□□ -0.15
ATG4B-203ENST00000400772 C3orf33Q6P1S2 294 aa14.12□□□□□ -0.15
ATG4B-203ENST00000400772 DNAJC14Q6Y2X3 702 aaPredicted RBP14.12□□□□□ -0.15
ATG4B-203ENST00000400772 MSANTD1Q6ZTZ1 278 aa14.12□□□□□ -0.15
ATG4B-203ENST00000400772 MIER2Q8N344 545 aa14.12□□□□□ -0.15
ATG4B-203ENST00000400772 TMEM234Q8WY98 164 aa14.12□□□□□ -0.15
ATG4B-203ENST00000400772 MBD6Q96DN6 1003 aa14.12□□□□□ -0.15
ATG4B-203ENST00000400772 ZC3HAV1LQ96H79 300 aaKnown RBP14.12□□□□□ -0.15
ATG4B-203ENST00000400772 REXO5Q96IC2 774 aaKnown RBP14.12□□□□□ -0.15
ATG4B-203ENST00000400772 EBF4Q9BQW3 602 aa14.12□□□□□ -0.15
ATG4B-203ENST00000400772 MTHFD2LQ9H903 347 aaPredicted RBP14.12□□□□□ -0.15
ATG4B-203ENST00000400772 CTPS2Q9NRF8 586 aa14.12□□□□□ -0.15
ATG4B-203ENST00000400772 ZNF226Q9NYT6 803 aa14.12□□□□□ -0.15
ATG4B-203ENST00000400772 KLHL13Q9P2N7 655 aa14.12□□□□□ -0.15
ATG4B-203ENST00000400772 FAM234BA2RU67 622 aa14.11□□□□□ -0.15
ATG4B-203ENST00000400772 RAF1P04049 648 aa14.11□□□□□ -0.15
ATG4B-203ENST00000400772 YES1P07947 543 aa14.11□□□□□ -0.15
ATG4B-203ENST00000400772 NR2F1P10589 423 aa14.11□□□□□ -0.15
ATG4B-203ENST00000400772 ETFAP13804 333 aa14.11□□□□□ -0.15
ATG4B-203ENST00000400772 SLC7A1P30825 629 aa14.11□□□□□ -0.15
ATG4B-203ENST00000400772 APOBEC1P41238 236 aaKnown RBP14.11□□□□□ -0.15
ATG4B-203ENST00000400772 MRPL19P49406 292 aaKnown RBP14.11□□□□□ -0.15
ATG4B-203ENST00000400772 IDH3AP50213 366 aa14.11□□□□□ -0.15
ATG4B-203ENST00000400772 TMEM201Q5SNT2 666 aa14.11□□□□□ -0.15
ATG4B-203ENST00000400772 TFAP2EQ6VUC0 442 aa14.11□□□□□ -0.15
ATG4B-203ENST00000400772 TMPPEQ6ZT21 453 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms