RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 HLA-CQ95604 372 aa16.98■□□□□ 0.31
COL18A1-204ENST00000400337 TEX37Q96LM6 180 aa16.98■□□□□ 0.31
COL18A1-204ENST00000400337 PPIL3Q9H2H8 161 aaKnown RBP16.98■□□□□ 0.31
COL18A1-204ENST00000400337 ACAD8Q9UKU7 415 aa16.98■□□□□ 0.31
COL18A1-204ENST00000400337 TMEM202A6NGA9 273 aa16.98■□□□□ 0.31
COL18A1-204ENST00000400337 RAB3AP20336 220 aa16.98■□□□□ 0.31
COL18A1-204ENST00000400337 ARF1P84077 181 aaKnown RBP16.98■□□□□ 0.31
COL18A1-204ENST00000400337 TBPL2Q6SJ96 375 aa16.98■□□□□ 0.31
COL18A1-204ENST00000400337 CNOT4O95628 575 aaKnown RBP16.97■□□□□ 0.31
COL18A1-204ENST00000400337 SNRPD2P62316 118 aaKnown RBP16.97■□□□□ 0.31
COL18A1-204ENST00000400337 HENMT1Q5T8I9 393 aaKnown RBP16.97■□□□□ 0.31
COL18A1-204ENST00000400337 FAIMQ9NVQ4 179 aa16.97■□□□□ 0.31
COL18A1-204ENST00000400337 HMX3A6NHT5 357 aa16.97■□□□□ 0.31
COL18A1-204ENST00000400337 AGTR1P30556 359 aa16.97■□□□□ 0.31
COL18A1-204ENST00000400337 DCAF7P61962 342 aa16.97■□□□□ 0.31
COL18A1-204ENST00000400337 POU3F1Q03052 451 aaPredicted RBP16.97■□□□□ 0.31
COL18A1-204ENST00000400337 P2RY14Q15391 338 aa16.97■□□□□ 0.31
COL18A1-204ENST00000400337 WBP2Q969T9 261 aa16.97■□□□□ 0.31
COL18A1-204ENST00000400337 GLIPR2Q9H4G4 154 aa16.97■□□□□ 0.31
COL18A1-204ENST00000400337 PLEKHM1Q9Y4G2 1056 aa16.97■□□□□ 0.31
COL18A1-204ENST00000400337 KIAA0100Q14667 2235 aaKnown RBP16.97■□□□□ 0.31
COL18A1-204ENST00000400337 FUOMA2VDF0 154 aa16.97■□□□□ 0.31
COL18A1-204ENST00000400337 BMP4P12644 408 aa16.97■□□□□ 0.31
COL18A1-204ENST00000400337 SPCS2Q15005 226 aa16.97■□□□□ 0.31
COL18A1-204ENST00000400337 RHEBQ15382 184 aa16.97■□□□□ 0.31
COL18A1-204ENST00000400337 UBE2UQ5VVX9 321 aa16.97■□□□□ 0.31
COL18A1-204ENST00000400337 CCNL2Q96S94 520 aaPredicted RBP16.97■□□□□ 0.31
COL18A1-204ENST00000400337 CDC6Q99741 560 aa16.97■□□□□ 0.31
COL18A1-204ENST00000400337 POLHQ9Y253 713 aa16.97■□□□□ 0.31
COL18A1-204ENST00000400337 RASD1Q9Y272 281 aa16.97■□□□□ 0.31
COL18A1-204ENST00000400337 CNTRLQ7Z7A1 2325 aa16.97■□□□□ 0.31
COL18A1-204ENST00000400337 NSG1A0A0A6YYJ2 146 aa16.97■□□□□ 0.31
COL18A1-204ENST00000400337 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.97■□□□□ 0.31
COL18A1-204ENST00000400337 ZNF264O43296 627 aa16.97■□□□□ 0.31
COL18A1-204ENST00000400337 HOXA9P31269 272 aa16.97■□□□□ 0.31
COL18A1-204ENST00000400337 MLLT11Q13015 90 aaPredicted RBP16.97■□□□□ 0.31
COL18A1-204ENST00000400337 HYAL4Q2M3T9 481 aa16.97■□□□□ 0.31
COL18A1-204ENST00000400337 SYNPRQ8TBG9 265 aa16.97■□□□□ 0.31
COL18A1-204ENST00000400337 CHRDQ9H2X0 955 aa16.97■□□□□ 0.31
COL18A1-204ENST00000400337 ZNF576Q9H609 170 aa16.97■□□□□ 0.31
COL18A1-204ENST00000400337 KCNIP1Q9NZI2 227 aa16.97■□□□□ 0.31
COL18A1-204ENST00000400337 VSX1Q9NZR4 365 aaPredicted RBP16.97■□□□□ 0.31
COL18A1-204ENST00000400337 MYH14Q7Z406 1995 aaKnown RBP16.97■□□□□ 0.31
COL18A1-204ENST00000400337 KDM4EB2RXH2 506 aaPredicted RBP16.96■□□□□ 0.31
COL18A1-204ENST00000400337 K7ESM1 405 aa16.96■□□□□ 0.31
COL18A1-204ENST00000400337 KNG1P01042 644 aa16.96■□□□□ 0.31
COL18A1-204ENST00000400337 GDF1P27539 372 aa16.96■□□□□ 0.31
COL18A1-204ENST00000400337 VASPP50552 380 aaPredicted RBP16.96■□□□□ 0.31
COL18A1-204ENST00000400337 CSNK1G2P78368 415 aa16.96■□□□□ 0.31
COL18A1-204ENST00000400337 DESI1Q6ICB0 168 aa16.96■□□□□ 0.31
COL18A1-204ENST00000400337 MTFR2Q6P444 385 aa16.96■□□□□ 0.31
COL18A1-204ENST00000400337 HAGHLQ6PII5 290 aaPredicted RBP16.96■□□□□ 0.31
COL18A1-204ENST00000400337 IL20RBQ6UXL0 311 aa16.96■□□□□ 0.31
COL18A1-204ENST00000400337 ZNF587Q96SQ5 575 aaPredicted RBP16.96■□□□□ 0.31
COL18A1-204ENST00000400337 NAA50Q9GZZ1 169 aaKnown RBP16.96■□□□□ 0.31
COL18A1-204ENST00000400337 EVA1AQ9H8M9 152 aa16.96■□□□□ 0.31
COL18A1-204ENST00000400337 IL37Q9NZH6 218 aa16.96■□□□□ 0.31
COL18A1-204ENST00000400337 ASB4Q9Y574 426 aa16.96■□□□□ 0.31
COL18A1-204ENST00000400337 NME7Q9Y5B8 376 aa16.96■□□□□ 0.31
COL18A1-204ENST00000400337 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.96■□□□□ 0.31
COL18A1-204ENST00000400337 ACOT8O14734 319 aa16.96■□□□□ 0.31
COL18A1-204ENST00000400337 HPGDSO60760 199 aa16.96■□□□□ 0.31
COL18A1-204ENST00000400337 SCRG1O75711 98 aa16.96■□□□□ 0.31
COL18A1-204ENST00000400337 RAB3DO95716 219 aa16.96■□□□□ 0.31
COL18A1-204ENST00000400337 IFNA5P01569 189 aa16.96■□□□□ 0.31
COL18A1-204ENST00000400337 MTHFD2P13995 350 aa16.96■□□□□ 0.31
COL18A1-204ENST00000400337 ARG2P78540 354 aa16.96■□□□□ 0.31
COL18A1-204ENST00000400337 ARL6IP1Q15041 203 aa16.96■□□□□ 0.31
COL18A1-204ENST00000400337 VASNQ6EMK4 673 aa16.96■□□□□ 0.31
COL18A1-204ENST00000400337 THAP7Q9BT49 309 aaPredicted RBP16.96■□□□□ 0.31
COL18A1-204ENST00000400337 RPL34P49207 117 aaKnown RBP16.96■□□□□ 0.31
COL18A1-204ENST00000400337 ZNF77Q15935 545 aa16.96■□□□□ 0.31
COL18A1-204ENST00000400337 ZNF750Q32MQ0 723 aa16.96■□□□□ 0.31
COL18A1-204ENST00000400337 SLC6A19Q695T7 634 aa16.96■□□□□ 0.31
COL18A1-204ENST00000400337 RAB11FIP2Q7L804 512 aa16.96■□□□□ 0.31
COL18A1-204ENST00000400337 MRPL21Q7Z2W9 205 aaKnown RBP16.96■□□□□ 0.31
COL18A1-204ENST00000400337 ABHD12BQ7Z5M8 362 aaPredicted RBP16.96■□□□□ 0.31
COL18A1-204ENST00000400337 HYLS1Q96M11 299 aa16.96■□□□□ 0.31
COL18A1-204ENST00000400337 AMDHD1Q96NU7 426 aa16.96■□□□□ 0.31
COL18A1-204ENST00000400337 GPR78Q96P69 363 aa16.96■□□□□ 0.31
COL18A1-204ENST00000400337 MAP3K3Q99759 626 aa16.96■□□□□ 0.31
COL18A1-204ENST00000400337 CACNG2Q9Y698 323 aa16.96■□□□□ 0.31
COL18A1-204ENST00000400337 MEIS3P1A6NDR6 274 aa16.96■□□□□ 0.31
COL18A1-204ENST00000400337 GOSR2O14653 212 aa16.96■□□□□ 0.31
COL18A1-204ENST00000400337 SERPINA5P05154 406 aa16.96■□□□□ 0.31
COL18A1-204ENST00000400337 GPR139Q6DWJ6 353 aa16.96■□□□□ 0.31
COL18A1-204ENST00000400337 PARM1Q6UWI2 310 aa16.96■□□□□ 0.31
COL18A1-204ENST00000400337 CLEC1AQ8NC01 280 aa16.96■□□□□ 0.31
COL18A1-204ENST00000400337 OR2T35Q8NGX2 323 aa16.96■□□□□ 0.31
COL18A1-204ENST00000400337 TOMM40LQ969M1 308 aa16.96■□□□□ 0.31
COL18A1-204ENST00000400337 LRRC46Q96FV0 321 aa16.96■□□□□ 0.31
COL18A1-204ENST00000400337 INPP5EQ9NRR6 644 aa16.96■□□□□ 0.31
COL18A1-204ENST00000400337 A0A0A6YYH2 397 aa16.95■□□□□ 0.3
COL18A1-204ENST00000400337 A6NJ64 397 aa16.95■□□□□ 0.3
COL18A1-204ENST00000400337 IFNGR1P15260 489 aa16.95■□□□□ 0.3
COL18A1-204ENST00000400337 ARSBP15848 533 aa16.95■□□□□ 0.3
COL18A1-204ENST00000400337 POU3F2P20265 443 aaPredicted RBP16.95■□□□□ 0.3
COL18A1-204ENST00000400337 MLC1Q15049 377 aa16.95■□□□□ 0.3
COL18A1-204ENST00000400337 ANKRD33Q7Z3H0 272 aa16.95■□□□□ 0.3
COL18A1-204ENST00000400337 PXKQ7Z7A4 578 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms