RNA–Protein interactions for RNA: ENST00000400068.7

SIRPA-203, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 4,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-203ENST00000400068 SLC38A1Q9H2H9 487 aa12.54□□□□□ -0.4
SIRPA-203ENST00000400068 TCF7L1Q9HCS4 588 aa12.54□□□□□ -0.4
SIRPA-203ENST00000400068 SIDT1Q9NXL6 827 aaKnown RBP12.54□□□□□ -0.4
SIRPA-203ENST00000400068 LRIT1Q9P2V4 623 aa12.54□□□□□ -0.4
SIRPA-203ENST00000400068 CDH10Q9Y6N8 788 aa12.54□□□□□ -0.4
SIRPA-203ENST00000400068 WDR87Q6ZQQ6 2873 aa12.53□□□□□ -0.4
SIRPA-203ENST00000400068 PRSS47A8MTI9 375 aa12.53□□□□□ -0.4
SIRPA-203ENST00000400068 ADAM23O75077 832 aa12.53□□□□□ -0.4
SIRPA-203ENST00000400068 RLN1P04808 185 aa12.53□□□□□ -0.4
SIRPA-203ENST00000400068 NR4A2P43354 598 aa12.53□□□□□ -0.4
SIRPA-203ENST00000400068 PSMD4P55036 377 aaKnown RBP12.53□□□□□ -0.4
SIRPA-203ENST00000400068 CHST8Q9H2A9 424 aa12.53□□□□□ -0.4
SIRPA-203ENST00000400068 FBRSQ9HAH7 460 aa12.53□□□□□ -0.4
SIRPA-203ENST00000400068 POT1Q9NUX5 634 aa12.53□□□□□ -0.4
SIRPA-203ENST00000400068 NLKQ9UBE8 527 aa12.53□□□□□ -0.4
SIRPA-203ENST00000400068 GRHPRQ9UBQ7 328 aa12.53□□□□□ -0.4
SIRPA-203ENST00000400068 SDK2Q58EX2 2172 aa12.53□□□□□ -0.4
SIRPA-203ENST00000400068 TRBV2A0A0J9YWF9 115 aa12.53□□□□□ -0.4
SIRPA-203ENST00000400068 SMAD9O15198 467 aaKnown RBP12.53□□□□□ -0.4
SIRPA-203ENST00000400068 EEF1E1O43324 174 aaKnown RBP12.53□□□□□ -0.4
SIRPA-203ENST00000400068 NOS1APO75052 506 aaPredicted RBP12.53□□□□□ -0.4
SIRPA-203ENST00000400068 TEAD1P28347 426 aa12.53□□□□□ -0.4
SIRPA-203ENST00000400068 SOX18P35713 384 aa12.53□□□□□ -0.4
SIRPA-203ENST00000400068 CRMP1Q14194 572 aa12.53□□□□□ -0.4
SIRPA-203ENST00000400068 ZNF550Q7Z398 422 aa12.53□□□□□ -0.4
SIRPA-203ENST00000400068 CNDP2Q96KP4 475 aaKnown RBP12.53□□□□□ -0.4
SIRPA-203ENST00000400068 TMEM185BQ9H7F4 350 aa12.53□□□□□ -0.4
SIRPA-203ENST00000400068 HHATLQ9HCP6 504 aa12.53□□□□□ -0.4
SIRPA-203ENST00000400068 METTL21EPA6NDL7 271 aa12.53□□□□□ -0.4
SIRPA-203ENST00000400068 M0R082 166 aa12.53□□□□□ -0.4
SIRPA-203ENST00000400068 RNF13O43567 381 aa12.53□□□□□ -0.4
SIRPA-203ENST00000400068 HPGDSO60760 199 aa12.53□□□□□ -0.4
SIRPA-203ENST00000400068 ARRB1P49407 418 aaPredicted RBP12.53□□□□□ -0.4
SIRPA-203ENST00000400068 GFERP55789 205 aa12.53□□□□□ -0.4
SIRPA-203ENST00000400068 HNRNPKP61978 463 aaKnown RBP eCLIP12.53□□□□□ -0.4
SIRPA-203ENST00000400068 ZP2Q05996 745 aa12.53□□□□□ -0.4
SIRPA-203ENST00000400068 PLCXD2Q0VAA5 305 aa12.53□□□□□ -0.4
SIRPA-203ENST00000400068 LEG1Q6P5S2 330 aa12.53□□□□□ -0.4
SIRPA-203ENST00000400068 VN1R4Q7Z5H5 301 aa12.53□□□□□ -0.4
SIRPA-203ENST00000400068 GID4Q8IVV7 300 aa12.53□□□□□ -0.4
SIRPA-203ENST00000400068 C19orf47Q8N9M1 422 aaKnown RBP12.53□□□□□ -0.4
SIRPA-203ENST00000400068 TANKQ92844 425 aa12.53□□□□□ -0.4
SIRPA-203ENST00000400068 CCDC120Q96HB5 630 aa12.53□□□□□ -0.4
SIRPA-203ENST00000400068 ELL3Q9HB65 397 aaPredicted RBP12.53□□□□□ -0.4
SIRPA-203ENST00000400068 ENAMQ9NRM1 1142 aa12.53□□□□□ -0.4
SIRPA-203ENST00000400068 A4GNTQ9UNA3 340 aa12.53□□□□□ -0.4
SIRPA-203ENST00000400068 COL4A6Q14031 1691 aa12.52□□□□□ -0.4
SIRPA-203ENST00000400068 FBXO45P0C2W1 286 aa12.52□□□□□ -0.4
SIRPA-203ENST00000400068 HAAOP46952 286 aa12.52□□□□□ -0.4
SIRPA-203ENST00000400068 CTXN1P60606 82 aa12.52□□□□□ -0.4
SIRPA-203ENST00000400068 KIAA0907Q7Z7F0 614 aaPredicted RBP12.52□□□□□ -0.4
SIRPA-203ENST00000400068 DYNC2LI1Q8TCX1 351 aa12.52□□□□□ -0.4
SIRPA-203ENST00000400068 C4orf36Q96KX1 117 aa12.52□□□□□ -0.4
SIRPA-203ENST00000400068 NOTCH4Q99466 2003 aa12.52□□□□□ -0.4
SIRPA-203ENST00000400068 A0A1B0GWA3 101 aa12.52□□□□□ -0.41
SIRPA-203ENST00000400068 A0A1W2PQ09 198 aa12.52□□□□□ -0.41
SIRPA-203ENST00000400068 A0A1W2PRQ8 180 aa12.52□□□□□ -0.41
SIRPA-203ENST00000400068 C2orf72A6NCS6 295 aa12.52□□□□□ -0.41
SIRPA-203ENST00000400068 OR6C70A6NIJ9 312 aa12.52□□□□□ -0.41
SIRPA-203ENST00000400068 ANXA2P2A6NMY6 339 aa12.52□□□□□ -0.41
SIRPA-203ENST00000400068 ANXA2P07355 339 aaKnown RBP12.52□□□□□ -0.41
SIRPA-203ENST00000400068 TRHRP34981 398 aaPredicted RBP12.52□□□□□ -0.41
SIRPA-203ENST00000400068 SQSTM1Q13501 440 aa12.52□□□□□ -0.41
SIRPA-203ENST00000400068 ELOAQ14241 798 aaKnown RBP12.52□□□□□ -0.41
SIRPA-203ENST00000400068 OR51Q1Q8NH59 317 aa12.52□□□□□ -0.41
SIRPA-203ENST00000400068 CHIAQ9BZP6 476 aa12.52□□□□□ -0.41
SIRPA-203ENST00000400068 UBQLN3Q9H347 655 aa12.52□□□□□ -0.41
SIRPA-203ENST00000400068 TMEM138Q9NPI0 162 aa12.52□□□□□ -0.41
SIRPA-203ENST00000400068 KLRF1Q9NZS2 232 aa12.52□□□□□ -0.41
SIRPA-203ENST00000400068 HTTP42858 3142 aa12.52□□□□□ -0.41
SIRPA-203ENST00000400068 GNALP38405 381 aa12.52□□□□□ -0.41
SIRPA-203ENST00000400068 OMPP47874 163 aa12.52□□□□□ -0.41
SIRPA-203ENST00000400068 MVDP53602 400 aa12.52□□□□□ -0.41
SIRPA-203ENST00000400068 GAS6Q14393 721 aa12.52□□□□□ -0.41
SIRPA-203ENST00000400068 GRM7Q14831 915 aa12.52□□□□□ -0.41
SIRPA-203ENST00000400068 TBRG1Q3YBR2 411 aa12.52□□□□□ -0.41
SIRPA-203ENST00000400068 CNIH2Q6PI25 160 aa12.52□□□□□ -0.41
SIRPA-203ENST00000400068 RPTNQ6XPR3 784 aa12.52□□□□□ -0.41
SIRPA-203ENST00000400068 Q6ZNX1 250 aa12.52□□□□□ -0.41
SIRPA-203ENST00000400068 RNF165Q6ZSG1 346 aa12.52□□□□□ -0.41
SIRPA-203ENST00000400068 RASGRP3Q8IV61 690 aa12.52□□□□□ -0.41
SIRPA-203ENST00000400068 ARL14Q8N4G2 192 aa12.52□□□□□ -0.41
SIRPA-203ENST00000400068 C1orf216Q8TAB5 229 aa12.52□□□□□ -0.41
SIRPA-203ENST00000400068 PIGUQ9H490 435 aa12.52□□□□□ -0.41
SIRPA-203ENST00000400068 IGKV1-8A0A0C4DH67 115 aa12.51□□□□□ -0.41
SIRPA-203ENST00000400068 TP53P04637 393 aaPredicted RBP12.51□□□□□ -0.41
SIRPA-203ENST00000400068 ACP2P11117 423 aa12.51□□□□□ -0.41
SIRPA-203ENST00000400068 SLC1A3P43003 542 aa12.51□□□□□ -0.41
SIRPA-203ENST00000400068 KIR2DL1P43626 348 aaPredicted RBP12.51□□□□□ -0.41
SIRPA-203ENST00000400068 NRARPQ7Z6K4 114 aa12.51□□□□□ -0.41
SIRPA-203ENST00000400068 CELF2-AS1Q8N7Q2 184 aa12.51□□□□□ -0.41
SIRPA-203ENST00000400068 WDR34Q96EX3 536 aa12.51□□□□□ -0.41
SIRPA-203ENST00000400068 ELF4Q99607 663 aaPredicted RBP12.51□□□□□ -0.41
SIRPA-203ENST00000400068 G6PC3Q9BUM1 346 aa12.51□□□□□ -0.41
SIRPA-203ENST00000400068 SEC61A2Q9H9S3 476 aa12.51□□□□□ -0.41
SIRPA-203ENST00000400068 TXNL4BQ9NX01 149 aaKnown RBP12.51□□□□□ -0.41
SIRPA-203ENST00000400068 RPH3AQ9Y2J0 694 aaPredicted RBP12.51□□□□□ -0.41
SIRPA-203ENST00000400068 AK6Q9Y3D8 172 aaKnown RBP12.51□□□□□ -0.41
SIRPA-203ENST00000400068 GRIP1Q9Y3R0 1128 aa12.51□□□□□ -0.41
SIRPA-203ENST00000400068 RENP00797 406 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms